EnhancerDB
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  3. vista51536[chr6:30731311-30731508]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51536[chr6:30731311-30731508]
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Tissue distribution of vista51536
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Transcription factor that possibly regulate vista51536[chr6:30731311-30731508]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30731266 30731785 EP300 UCSC Txn Factor no Conserved 108539510
chr6 30731266 30731785 EP300 UCSC Txn Factor no Conserved 108539511
chr6 30731286 30731648 SP1 UCSC Txn Factor no Conserved 108539512
chr6 30731289 30731532 RXRA UCSC Txn Factor no Conserved 108539513
chr6 30731304 30731528 CEBPB UCSC Txn Factor no Conserved 108539514
chr6 30731304 30731322 RARA JASPAR yes 70344139
chr6 30731304 30731322 RARA JASPAR yes 101046023
chr6 30731319 30731328 NFIX JASPAR yes 70344140
chr6 30731319 30731328 NFIX JASPAR yes 101046024
chr6 30731319 30731329 NFIA JASPAR yes 70344141
chr6 30731319 30731329 NFIA JASPAR yes 101046025
chr6 30731321 30731327 NFIC JASPAR yes 70344142
chr6 30731321 30731327 NFIC JASPAR yes 101046026
chr6 30731340 30731355 STAT2 JASPAR yes 70344143
chr6 30731340 30731355 STAT2 JASPAR yes 101046027
chr6 30731341 30731355 STAT1 JASPAR yes 70344144
chr6 30731341 30731355 STAT1 JASPAR yes 101046028
chr6 30731342 30731356 IRF8 JASPAR yes 70344145
chr6 30731342 30731356 IRF8 JASPAR yes 101046029
chr6 30731342 30731357 IRF9 JASPAR yes 70344146
chr6 30731342 30731357 IRF9 JASPAR yes 101046030
chr6 30731347 30731351 YY1 TRANSFAC yes 70344147
chr6 30731347 30731351 YY1 TRANSFAC yes 101046031
chr6 30731378 30731382 YY1 TRANSFAC yes 70344148
chr6 30731378 30731382 YY1 TRANSFAC yes 101046032
chr6 30731382 30731397 RUNX2 JASPAR yes 70344149
chr6 30731382 30731397 RUNX2 JASPAR yes 101046033
chr6 30731394 30731404 ERF JASPAR yes 70344150
chr6 30731394 30731404 ETV3 JASPAR yes 70344151
chr6 30731394 30731404 ERF JASPAR yes 101046034
chr6 30731394 30731404 ETV3 JASPAR yes 101046035
chr6 30731396 30731402 ETS1 JASPAR yes 70344152
chr6 30731396 30731402 ETS1 JASPAR yes 101046036
chr6 30731405 30731423 TP73 JASPAR yes 70344153
chr6 30731405 30731423 TP73 JASPAR yes 101046037
chr6 30731413 30731427 RXRB JASPAR yes 70344154
chr6 30731413 30731427 RXRG JASPAR yes 70344155
chr6 30731413 30731427 RXRB JASPAR yes 101046038
chr6 30731413 30731427 RXRG JASPAR yes 101046039
chr6 30731413 30731428 NR2C2 JASPAR yes 70344156
chr6 30731413 30731428 NR2C2 JASPAR yes 101046040
chr6 30731414 30731429 PRDM1 JASPAR yes 70344157
chr6 30731414 30731429 PRDM1 JASPAR yes 101046041
chr6 30731422 30731443 ZNF263 JASPAR yes 70344158
chr6 30731422 30731443 ZNF263 JASPAR yes 101046042
chr6 30731425 30731437 INSM1 JASPAR yes 70344159
chr6 30731425 30731437 INSM1 JASPAR yes 101046043
chr6 30731427 30731448 ZNF263 JASPAR yes 70344160
chr6 30731427 30731448 ZNF263 JASPAR yes 101046044
chr6 30731449 30731464 MYBL2 JASPAR yes 70344161
chr6 30731449 30731464 MYBL2 JASPAR yes 101046045
chr6 30731452 30731467 HNF1A JASPAR yes 70344162
chr6 30731452 30731467 HNF1A JASPAR yes 101046046
chr6 30731453 30731465 HNF1B JASPAR yes 70344163
chr6 30731453 30731465 HNF1B JASPAR yes 101046047
chr6 30731453 30731466 HNF1B JASPAR yes 70344164
chr6 30731453 30731466 HNF1B JASPAR yes 101046048
chr6 30731459 30731463 YY1 TRANSFAC yes 70344165
chr6 30731459 30731463 YY1 TRANSFAC yes 101046049
chr6 30731472 30731486 CREB3L1 JASPAR yes 70344166
chr6 30731472 30731486 CREB3L1 JASPAR yes 101046050
chr6 30731475 30731488 ZBTB18 JASPAR yes 70344167
chr6 30731475 30731488 ZBTB18 JASPAR yes 101046051
chr6 30731482 30731503 ZNF263 JASPAR yes 70344168
chr6 30731482 30731503 ZNF263 JASPAR yes 101046052
chr6 30731493 30731498 ETS2 TRANSFAC yes 70344169
chr6 30731493 30731498 ETS2 TRANSFAC yes 101046053
chr6 30731496 30731507 TBX20 JASPAR yes 70344170
chr6 30731496 30731507 TBX20 JASPAR yes 101046054
SNP sites on vista51536[chr6:30731311-30731508]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30731330 rs9262176 C T
CEBPB EP300 RXRA SP1
8948614
chr6 30731401 rs3095338 A T
CEBPB EP300 ERF ETS1 ETV3 RXRA SP1
8948615
chr6 30731469 rs77580845 G T
CEBPB EP300 RXRA SP1
8948616
chr6 30731473 rs193038678 C G
CEBPB CREB3L1 EP300 RXRA SP1
8948617
chr6 30731478 rs111325731 A G
CEBPB CREB3L1 EP300 RXRA SP1 ZBTB18
8948618
chr6 30731497 rs112108441 C T
CEBPB EP300 ETS2 RXRA SP1 TBX20 ZNF263
8948619
chr6 30731505 rs13214831 G A
CEBPB EP300 RXRA SP1 TBX20
8948620
Genes possibly regulated by vista51536[chr6:30731311-30731508]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30620896 30640814 - DHX16 ENSG00000204560.5 30640814 0.59 0.74 6346 9503
chr6 30644166 30655672 - PPP1R18 ENSG00000146112.7 30655672 0.75 0.78 6347 24361
chr6 30655824 30659197 - NRM ENSG00000137404.10 30659197 0.71 0.72 6348 27886
chr6 30667584 30685666 - MDC1 ENSG00000137337.10 30685666 0.64 0.88 6349 54355
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 56667
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 79199
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 81020
Expression level of Genes
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miRNAs possibly regulated by vista51536[chr6:30731311-30731508]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results