EnhancerDB
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  3. vista51544[chr6:30754817-30754946]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51544[chr6:30754817-30754946]
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Tissue distribution of vista51544
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Transcription factor that possibly regulate vista51544[chr6:30754817-30754946]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30754802 30754817 MEF2A JASPAR yes 70344651
chr6 30754802 30754817 MEF2A JASPAR yes 101049594
chr6 30754860 30754863 MYB TRANSFAC yes 70344652
chr6 30754860 30754863 MYB TRANSFAC yes 101049599
chr6 30754871 30754875 ESR1 TRANSFAC yes 70344653
chr6 30754871 30754875 ESR1 TRANSFAC yes 101049600
chr6 30754878 30754883 MYC TRANSFAC yes 70344654
chr6 30754878 30754883 MYC TRANSFAC yes 101049601
chr6 30754881 30754895 TLX1 JASPAR yes 70344655
chr6 30754881 30754895 TLX1 JASPAR yes 101049602
chr6 30754882 30754896 TLX1 JASPAR yes 70344656
chr6 30754882 30754896 TLX1 JASPAR yes 101049603
chr6 30754887 30754905 SRF JASPAR yes 70344657
chr6 30754887 30754905 SRF JASPAR yes 101049604
chr6 30754889 30754905 SRF JASPAR yes 70344658
chr6 30754889 30754905 SRF JASPAR yes 101049605
chr6 30754924 30754945 IRF1 JASPAR yes 70344659
chr6 30754924 30754945 IRF1 JASPAR yes 101049606
chr6 30754927 30754942 FOXP1 JASPAR yes 70344660
chr6 30754927 30754942 FOXP1 JASPAR yes 101049607
chr6 30754929 30754944 FOXP1 JASPAR yes 70344661
chr6 30754929 30754944 FOXP1 JASPAR yes 101049608
chr6 30754930 30754945 FOXP1 JASPAR yes 70344662
chr6 30754930 30754945 FOXP1 JASPAR yes 101049609
chr6 30754931 30754946 FOXP1 JASPAR yes 70344663
chr6 30754931 30754946 FOXP1 JASPAR yes 101049610
chr6 30754932 30754947 FOXP1 JASPAR yes 70344664
chr6 30754932 30754947 FOXP1 JASPAR yes 101049611
SNP sites on vista51544[chr6:30754817-30754946]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30754822 rs553312769 G A no 8948974
chr6 30754876 rs144623788 A C no 8948975
chr6 30754930 rs34552301 C CT
FOXP1 IRF1
8948976
chr6 30754930 rs9281040 C CT
FOXP1 IRF1
8948977
Genes possibly regulated by vista51544[chr6:30754817-30754946]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30644166 30655672 - PPP1R18 ENSG00000146112.7 30655672 0.75 0.78 6347 855
chr6 30655824 30659197 - NRM ENSG00000137404.10 30659197 0.71 0.72 6348 4380
chr6 30667584 30685666 - MDC1 ENSG00000137337.10 30685666 0.64 0.88 6349 30849
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 33161
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 55693
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 57514
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 10748
Expression level of Genes
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miRNAs possibly regulated by vista51544[chr6:30754817-30754946]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results