EnhancerDB
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  3. vista51546[chr6:30761567-30761766]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51546[chr6:30761567-30761766]
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Tissue distribution of vista51546
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Transcription factor that possibly regulate vista51546[chr6:30761567-30761766]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30761618 30761847 RUNX3 UCSC Txn Factor no Conserved 108539548
chr6 30761557 30761568 FLI1 JASPAR yes 70344694
chr6 30761557 30761568 FLI1 JASPAR yes 101050661
chr6 30761571 30761588 RARA JASPAR yes 70344695
chr6 30761571 30761588 RXRA JASPAR yes 70344696
chr6 30761571 30761588 RARA JASPAR yes 101050663
chr6 30761571 30761588 RXRA JASPAR yes 101050664
chr6 30761578 30761591 NR2F1 JASPAR yes 70344697
chr6 30761578 30761591 NR2F1 JASPAR yes 101050665
chr6 30761582 30761592 RORA JASPAR yes 70344698
chr6 30761582 30761592 RORA JASPAR yes 101050666
chr6 30761596 30761612 SOX8 JASPAR yes 70344699
chr6 30761596 30761612 SOX8 JASPAR yes 101050667
chr6 30761608 30761614 LEF1 TRANSFAC yes 70344700
chr6 30761608 30761614 SOX10 JASPAR yes 70344701
chr6 30761608 30761614 LEF1 TRANSFAC yes 101050668
chr6 30761608 30761614 SOX10 JASPAR yes 101050669
chr6 30761620 30761630 ALX3 JASPAR yes 70344702
chr6 30761620 30761630 GSX2 JASPAR yes 70344703
chr6 30761620 30761630 LBX2 JASPAR yes 70344704
chr6 30761620 30761630 MIXL1 JASPAR yes 70344705
chr6 30761620 30761630 ALX3 JASPAR yes 101050670
chr6 30761620 30761630 GSX2 JASPAR yes 101050671
chr6 30761620 30761630 LBX2 JASPAR yes 101050672
chr6 30761620 30761630 MIXL1 JASPAR yes 101050673
chr6 30761621 30761625 H1TF2 TRANSFAC yes 70344706
chr6 30761621 30761625 NFE TRANSFAC yes 70344707
chr6 30761621 30761625 SRF TRANSFAC yes 70344708
chr6 30761621 30761625 H1TF2 TRANSFAC yes 101050674
chr6 30761621 30761625 NFE TRANSFAC yes 101050675
chr6 30761621 30761625 SRF TRANSFAC yes 101050676
chr6 30761621 30761629 BARX1 JASPAR yes 70344709
chr6 30761621 30761629 BSX JASPAR yes 70344710
chr6 30761621 30761629 EN1 JASPAR yes 70344711
chr6 30761621 30761629 ISX JASPAR yes 70344712
chr6 30761621 30761629 LHX9 JASPAR yes 70344713
chr6 30761621 30761629 MSX1 JASPAR yes 70344714
chr6 30761621 30761629 MSX2 JASPAR yes 70344715
chr6 30761621 30761629 PRRX1 JASPAR yes 70344716
chr6 30761621 30761629 RAX2 JASPAR yes 70344717
chr6 30761621 30761629 SHOX JASPAR yes 70344718
chr6 30761621 30761629 BARX1 JASPAR yes 101050677
chr6 30761621 30761629 BSX JASPAR yes 101050678
chr6 30761621 30761629 EN1 JASPAR yes 101050679
chr6 30761621 30761629 ISX JASPAR yes 101050680
chr6 30761621 30761629 LHX9 JASPAR yes 101050681
chr6 30761621 30761629 MSX1 JASPAR yes 101050682
chr6 30761621 30761629 MSX2 JASPAR yes 101050683
chr6 30761621 30761629 PRRX1 JASPAR yes 101050684
chr6 30761621 30761629 RAX2 JASPAR yes 101050685
chr6 30761621 30761629 SHOX JASPAR yes 101050686
chr6 30761628 30761639 DMRT3 JASPAR yes 70344719
chr6 30761628 30761639 DMRT3 JASPAR yes 101050687
chr6 30761631 30761645 FOXF2 JASPAR yes 70344720
chr6 30761631 30761645 FOXF2 JASPAR yes 101050688
chr6 30761641 30761655 SPIC JASPAR yes 70344721
chr6 30761641 30761655 SPIC JASPAR yes 101050689
chr6 30761645 30761651 MZF1 JASPAR yes 70344722
chr6 30761645 30761651 MZF1 JASPAR yes 101050690
chr6 30761661 30761674 ATF4 JASPAR yes 70344723
chr6 30761661 30761674 ATF4 JASPAR yes 101050691
chr6 30761664 30761675 PHOX2A JASPAR yes 70344724
chr6 30761664 30761675 PHOX2A JASPAR yes 101050692
chr6 30761674 30761685 FOXB1 JASPAR yes 70344725
chr6 30761674 30761685 FOXC1 JASPAR yes 70344726
chr6 30761674 30761685 FOXB1 JASPAR yes 101050693
chr6 30761674 30761685 FOXC1 JASPAR yes 101050694
chr6 30761675 30761679 YY1 TRANSFAC yes 70344727
chr6 30761675 30761679 YY1 TRANSFAC yes 101050695
chr6 30761692 30761713 IRF1 JASPAR yes 70344728
chr6 30761692 30761713 IRF1 JASPAR yes 101050696
chr6 30761694 30761705 ELK4 JASPAR yes 70344729
chr6 30761694 30761705 FLI1 JASPAR yes 70344730
chr6 30761694 30761705 ELK4 JASPAR yes 101050697
chr6 30761694 30761705 FLI1 JASPAR yes 101050698
chr6 30761694 30761707 ELF3 JASPAR yes 70344731
chr6 30761694 30761707 ELF3 JASPAR yes 101050699
chr6 30761695 30761705 ERF JASPAR yes 70344732
chr6 30761695 30761705 ETS1 JASPAR yes 70344733
chr6 30761695 30761705 ERF JASPAR yes 101050700
chr6 30761695 30761705 ETS1 JASPAR yes 101050701
chr6 30761695 30761706 ELF5 JASPAR yes 70344734
chr6 30761695 30761706 ETV2 JASPAR yes 70344735
chr6 30761695 30761706 ELF5 JASPAR yes 101050702
chr6 30761695 30761706 ETV2 JASPAR yes 101050703
chr6 30761695 30761707 EHF JASPAR yes 70344736
chr6 30761695 30761707 ELF1 JASPAR yes 70344737
chr6 30761695 30761707 ELF4 JASPAR yes 70344738
chr6 30761695 30761707 EHF JASPAR yes 101050704
chr6 30761695 30761707 ELF1 JASPAR yes 101050705
chr6 30761695 30761707 ELF4 JASPAR yes 101050706
chr6 30761695 30761708 ELF1 JASPAR yes 70344739
chr6 30761695 30761708 ELF1 JASPAR yes 101050707
chr6 30761695 30761709 SPI1 JASPAR yes 70344740
chr6 30761695 30761709 SPIC JASPAR yes 70344741
chr6 30761695 30761709 SPI1 JASPAR yes 101050708
chr6 30761695 30761709 SPIC JASPAR yes 101050709
chr6 30761699 30761711 FOXI1 JASPAR yes 70344742
chr6 30761699 30761711 FOXI1 JASPAR yes 101050710
chr6 30761711 30761717 MYC TRANSFAC yes 70344743
chr6 30761711 30761717 MYC TRANSFAC yes 101050711
chr6 30761715 30761726 RUNX1 JASPAR yes 70344744
chr6 30761715 30761726 RUNX1 JASPAR yes 101050712
chr6 30761736 30761757 IRF1 JASPAR yes 70344745
chr6 30761736 30761757 IRF1 JASPAR yes 101050713
chr6 30761738 30761753 PRDM1 JASPAR yes 70344746
chr6 30761738 30761753 PRDM1 JASPAR yes 101050714
chr6 30761753 30761759 LEF1 TRANSFAC yes 70344747
chr6 30761753 30761759 SOX10 JASPAR yes 70344748
chr6 30761753 30761759 LEF1 TRANSFAC yes 101050715
chr6 30761753 30761759 SOX10 JASPAR yes 101050716
SNP sites on vista51546[chr6:30761567-30761766]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30761572 rs3129984 C T
RARA RXRA
8949124
chr6 30761687 rs114898531 A G
RUNX3
8949125
chr6 30761734 rs3094112 T C
RUNX3
8949126
Genes possibly regulated by vista51546[chr6:30761567-30761766]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30667584 30685666 - MDC1 ENSG00000137337.10 30685666 0.64 0.88 6349 24099
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 0.8 0.77 6350 26411
chr6 30695486 30710510 - FLOT1 ENSG00000137312.10 30710510 0.61 0.86 6351 48943
chr6 30710976 30712331 - IER3 ENSG00000137331.11 30712331 0.82 0.96 6352 50764
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 17568
Expression level of Genes
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miRNAs possibly regulated by vista51546[chr6:30761567-30761766]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results