EnhancerDB
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  3. vista5155[chr1:220399770-220399931]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5155[chr1:220399770-220399931]
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Tissue distribution of vista5155
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Transcription factor that possibly regulate vista5155[chr1:220399770-220399931]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 220399771 220399786 FOXP1 JASPAR yes 35479207
chr1 220399771 220399786 FOXP1 JASPAR yes 118461096
chr1 220399772 220399787 FOXP1 JASPAR yes 35479208
chr1 220399772 220399787 FOXP1 JASPAR yes 118461097
chr1 220399772 220399793 IRF1 JASPAR yes 35479209
chr1 220399772 220399793 IRF1 JASPAR yes 118461098
chr1 220399773 220399779 TBP TRANSFAC yes 35479210
chr1 220399773 220399779 TBP TRANSFAC yes 118461099
chr1 220399773 220399788 FOXP1 JASPAR yes 35479211
chr1 220399773 220399788 FOXP1 JASPAR yes 118461100
chr1 220399776 220399791 STAT2 JASPAR yes 35479212
chr1 220399776 220399791 STAT2 JASPAR yes 118461101
chr1 220399797 220399801 YY1 TRANSFAC yes 35479213
chr1 220399797 220399801 YY1 TRANSFAC yes 118461102
chr1 220399804 220399808 YY1 TRANSFAC yes 35479214
chr1 220399804 220399808 YY1 TRANSFAC yes 118461103
chr1 220399819 220399837 MAFF JASPAR yes 35479215
chr1 220399819 220399837 MAFF JASPAR yes 118461104
chr1 220399820 220399835 MAFK JASPAR yes 35479216
chr1 220399820 220399835 MAFK JASPAR yes 118461105
chr1 220399822 220399841 CTCF JASPAR yes 35479217
chr1 220399822 220399841 CTCF JASPAR yes 118461106
chr1 220399824 220399835 NRL JASPAR yes 35479218
chr1 220399824 220399835 NRL JASPAR yes 118461107
chr1 220399831 220399837 YY1 JASPAR yes 35479219
chr1 220399831 220399837 YY1 JASPAR yes 118461108
chr1 220399847 220399854 NFATC2 JASPAR yes 35479220
chr1 220399847 220399854 NFATC2 JASPAR yes 118461109
chr1 220399851 220399855 H1TF2 TRANSFAC yes 35479221
chr1 220399851 220399855 NFE TRANSFAC yes 35479222
chr1 220399851 220399855 SRF TRANSFAC yes 35479223
chr1 220399851 220399855 H1TF2 TRANSFAC yes 118461110
chr1 220399851 220399855 NFE TRANSFAC yes 118461111
chr1 220399851 220399855 SRF TRANSFAC yes 118461112
chr1 220399855 220399869 TLX1 JASPAR yes 35479224
chr1 220399855 220399869 TLX1 JASPAR yes 118461113
chr1 220399857 220399863 MZF1 JASPAR yes 35479225
chr1 220399857 220399863 MZF1 JASPAR yes 118461114
chr1 220399858 220399878 RREB1 JASPAR yes 35479226
chr1 220399858 220399878 RREB1 JASPAR yes 118461115
chr1 220399872 220399876 NFE TRANSFAC yes 35479227
chr1 220399872 220399876 NFE TRANSFAC yes 118461116
chr1 220399872 220399877 GATA1 TRANSFAC yes 35479228
chr1 220399872 220399877 GATA1 TRANSFAC yes 118461117
chr1 220399872 220399878 GATA3 JASPAR yes 35479229
chr1 220399872 220399878 GATA3 JASPAR yes 118461118
chr1 220399895 220399906 PHOX2A JASPAR yes 35479230
chr1 220399895 220399906 PROP1 JASPAR yes 35479231
chr1 220399895 220399906 PHOX2A JASPAR yes 118461119
chr1 220399895 220399906 PROP1 JASPAR yes 118461120
chr1 220399906 220399920 SPI1 JASPAR yes 35479232
chr1 220399906 220399920 SPI1 JASPAR yes 118461121
chr1 220399910 220399917 SPIB JASPAR yes 35479233
chr1 220399910 220399917 SPIB JASPAR yes 118461122
chr1 220399920 220399926 LEF1 TRANSFAC yes 35479234
chr1 220399920 220399926 SOX10 JASPAR yes 35479235
chr1 220399920 220399926 LEF1 TRANSFAC yes 118461123
chr1 220399920 220399926 SOX10 JASPAR yes 118461124
SNP sites on vista5155[chr1:220399770-220399931]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 220399835 rs115983629 G T
CTCF MAFF MAFK NRL YY1
958955
chr1 220399908 rs17007187 T G
SPI1
958956
Genes possibly regulated by vista5155[chr1:220399770-220399931]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 220321635 220445796 - RAB3GAP2 ENSG00000118873.11 220445796 0.68 0.99 1856 54135
Expression level of Genes
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miRNAs possibly regulated by vista5155[chr1:220399770-220399931]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results