EnhancerDB
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  3. vista51556[chr6:30845366-30845734]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51556[chr6:30845366-30845734]
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Tissue distribution of vista51556
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Transcription factor that possibly regulate vista51556[chr6:30845366-30845734]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30845443 30845867 CTCF UCSC Txn Factor no Conserved 108539579
chr6 30845472 30845860 IRF1 UCSC Txn Factor no Conserved 108539580
chr6 30845500 30845844 STAT3 UCSC Txn Factor no Conserved 108539581
chr6 30845524 30845791 RAD21 UCSC Txn Factor no Conserved 108539582
chr6 30845527 30845799 SMC3 UCSC Txn Factor no Conserved 108539583
chr6 30845532 30845738 PRDM1 UCSC Txn Factor no Conserved 108539584
chr6 30845370 30845382 NHLH1 JASPAR yes 70345299
chr6 30845370 30845382 NHLH1 JASPAR yes 101062215
chr6 30845373 30845384 STAT3 JASPAR yes 70345300
chr6 30845373 30845384 STAT3 JASPAR yes 101062216
chr6 30845377 30845388 NFKB1 JASPAR yes 70345301
chr6 30845377 30845388 NFKB1 JASPAR yes 101062217
chr6 30845401 30845422 ZNF263 JASPAR yes 70345302
chr6 30845401 30845422 ZNF263 JASPAR yes 101062218
chr6 30845407 30845422 FOXP1 JASPAR yes 70345303
chr6 30845407 30845422 FOXP1 JASPAR yes 101062219
chr6 30845408 30845429 IRF1 JASPAR yes 70345304
chr6 30845408 30845429 IRF1 JASPAR yes 101062220
chr6 30845412 30845426 SPIC JASPAR yes 70345305
chr6 30845412 30845426 STAT1 JASPAR yes 70345306
chr6 30845412 30845426 SPIC JASPAR yes 101062221
chr6 30845412 30845426 STAT1 JASPAR yes 101062222
chr6 30845412 30845427 PRDM1 JASPAR yes 70345307
chr6 30845412 30845427 STAT2 JASPAR yes 70345308
chr6 30845412 30845427 PRDM1 JASPAR yes 101062223
chr6 30845412 30845427 STAT2 JASPAR yes 101062224
chr6 30845412 30845430 IRF2 JASPAR yes 70345309
chr6 30845412 30845430 IRF2 JASPAR yes 101062225
chr6 30845417 30845431 IRF7 JASPAR yes 70345310
chr6 30845417 30845431 IRF7 JASPAR yes 101062226
chr6 30845425 30845438 HSF1 JASPAR yes 70345311
chr6 30845425 30845438 HSF1 JASPAR yes 101062227
chr6 30845433 30845436 MYB TRANSFAC yes 70345312
chr6 30845433 30845436 MYB TRANSFAC yes 101062228
chr6 30845445 30845449 TEAD2 TRANSFAC yes 70345313
chr6 30845445 30845449 TEAD2 TRANSFAC yes 101062229
chr6 30845445 30845450 TBP TRANSFAC yes 70345314
chr6 30845445 30845450 TBP TRANSFAC yes 101062230
chr6 30845445 30845451 TMF TRANSFAC yes 70345315
chr6 30845445 30845451 TMF TRANSFAC yes 101062231
chr6 30845449 30845460 FOXC1 JASPAR yes 70345316
chr6 30845449 30845460 FOXC1 JASPAR yes 101062232
chr6 30845466 30845479 POU3F3 JASPAR yes 70345317
chr6 30845466 30845479 POU3F3 JASPAR yes 101062233
chr6 30845466 30845480 POU1F1 JASPAR yes 70345318
chr6 30845466 30845480 POU1F1 JASPAR yes 101062234
chr6 30845467 30845479 POU3F1 JASPAR yes 70345319
chr6 30845467 30845479 POU3F2 JASPAR yes 70345320
chr6 30845467 30845479 POU3F1 JASPAR yes 101062235
chr6 30845467 30845479 POU3F2 JASPAR yes 101062236
chr6 30845468 30845484 SRF JASPAR yes 70345321
chr6 30845468 30845484 SRF JASPAR yes 101062237
chr6 30845471 30845481 NOTO JASPAR yes 70345322
chr6 30845471 30845481 NOTO JASPAR yes 101062238
chr6 30845471 30845485 RORA JASPAR yes 70345323
chr6 30845471 30845485 RORA JASPAR yes 101062239
chr6 30845474 30845484 RORA JASPAR yes 70345324
chr6 30845474 30845484 RORA JASPAR yes 101062240
chr6 30845474 30845489 JUND JASPAR yes 70345325
chr6 30845474 30845489 JUND JASPAR yes 101062241
chr6 30845475 30845488 JUN JASPAR yes 70345326
chr6 30845475 30845488 JUN JASPAR yes 101062242
chr6 30845475 30845495 PPARG JASPAR yes 70345327
chr6 30845475 30845495 PPARG JASPAR yes 101062243
chr6 30845476 30845494 ESR2 JASPAR yes 70345328
chr6 30845476 30845494 ESR2 JASPAR yes 101062244
chr6 30845476 30845496 PPARG JASPAR yes 70345329
chr6 30845476 30845496 PPARG JASPAR yes 101062245
chr6 30845477 30845494 ESR1 JASPAR yes 70345330
chr6 30845477 30845494 ESR1 JASPAR yes 101062246
chr6 30845478 30845493 ESR2 JASPAR yes 70345331
chr6 30845478 30845493 ESR2 JASPAR yes 101062247
chr6 30845478 30845498 ESR1 JASPAR yes 70345332
chr6 30845478 30845498 ESR1 JASPAR yes 101062248
chr6 30845479 30845483 ESR1 TRANSFAC yes 70345333
chr6 30845479 30845483 ESR1 TRANSFAC yes 101062249
chr6 30845486 30845501 MEF2C JASPAR yes 70345334
chr6 30845486 30845501 MEF2C JASPAR yes 101062250
chr6 30845487 30845502 MEF2A JASPAR yes 70345335
chr6 30845487 30845502 MEF2A JASPAR yes 101062251
chr6 30845501 30845513 NHLH1 JASPAR yes 70345336
chr6 30845501 30845513 NHLH1 JASPAR yes 101062252
chr6 30845502 30845512 NHLH1 JASPAR yes 70345337
chr6 30845502 30845512 NHLH1 JASPAR yes 101062253
chr6 30845508 30845519 TFAP2C JASPAR yes 70345338
chr6 30845508 30845519 TFAP2C JASPAR yes 101062254
chr6 30845509 30845518 TFAP2A JASPAR yes 70345339
chr6 30845509 30845518 TFAP2A JASPAR yes 101062255
chr6 30845525 30845540 ESR2 JASPAR yes 70345340
chr6 30845525 30845540 ESR2 JASPAR yes 101062256
chr6 30845530 30845543 NR2F1 JASPAR yes 70345341
chr6 30845530 30845543 NR2F1 JASPAR yes 101062257
chr6 30845545 30845565 RREB1 JASPAR yes 70345342
chr6 30845545 30845565 RREB1 JASPAR yes 101062258
chr6 30845564 30845575 ELK4 JASPAR yes 70345343
chr6 30845564 30845575 FLI1 JASPAR yes 70345344
chr6 30845564 30845575 ELK4 JASPAR yes 101062259
chr6 30845564 30845575 FLI1 JASPAR yes 101062260
chr6 30845577 30845597 TP63 JASPAR yes 70345345
chr6 30845577 30845597 TP63 JASPAR yes 101062261
chr6 30845604 30845622 ESR1 JASPAR yes 70345346
chr6 30845604 30845622 ESR1 JASPAR yes 101062262
chr6 30845605 30845623 IRF2 JASPAR yes 70345347
chr6 30845605 30845623 IRF2 JASPAR yes 101062263
chr6 30845606 30845627 IRF1 JASPAR yes 70345348
chr6 30845606 30845627 IRF1 JASPAR yes 101062264
chr6 30845608 30845623 PRDM1 JASPAR yes 70345349
chr6 30845608 30845623 STAT2 JASPAR yes 70345350
chr6 30845608 30845623 PRDM1 JASPAR yes 101062265
chr6 30845608 30845623 STAT2 JASPAR yes 101062266
chr6 30845609 30845623 STAT1 JASPAR yes 70345351
chr6 30845609 30845623 STAT1 JASPAR yes 101062267
chr6 30845610 30845622 IRF1 JASPAR yes 70345352
chr6 30845610 30845622 IRF1 JASPAR yes 101062268
chr6 30845610 30845624 IRF7 JASPAR yes 70345353
chr6 30845610 30845624 IRF8 JASPAR yes 70345354
chr6 30845610 30845624 IRF7 JASPAR yes 101062269
chr6 30845610 30845624 IRF8 JASPAR yes 101062270
chr6 30845610 30845625 IRF9 JASPAR yes 70345355
chr6 30845610 30845625 IRF9 JASPAR yes 101062271
chr6 30845614 30845629 PRDM1 JASPAR yes 70345356
chr6 30845614 30845629 PRDM1 JASPAR yes 101062272
chr6 30845616 30845634 IRF2 JASPAR yes 70345357
chr6 30845616 30845634 IRF2 JASPAR yes 101062273
chr6 30845617 30845638 IRF1 JASPAR yes 70345358
chr6 30845617 30845638 IRF1 JASPAR yes 101062274
chr6 30845619 30845624 ETS2 TRANSFAC yes 70345359
chr6 30845619 30845624 ETS2 TRANSFAC yes 101062275
chr6 30845619 30845634 STAT2 JASPAR yes 70345360
chr6 30845619 30845634 STAT2 JASPAR yes 101062276
chr6 30845626 30845630 YY1 TRANSFAC yes 70345361
chr6 30845626 30845630 YY1 TRANSFAC yes 101062277
chr6 30845626 30845643 BCL6B JASPAR yes 70345362
chr6 30845626 30845643 BCL6B JASPAR yes 101062278
chr6 30845627 30845637 NFATC3 JASPAR yes 70345363
chr6 30845627 30845637 NFATC3 JASPAR yes 101062279
chr6 30845627 30845642 STAT1 JASPAR yes 70345364
chr6 30845627 30845642 STAT1 JASPAR yes 101062280
chr6 30845628 30845635 NFATC2 JASPAR yes 70345365
chr6 30845628 30845635 NFATC2 JASPAR yes 101062281
chr6 30845629 30845640 STAT1 JASPAR yes 70345366
chr6 30845629 30845640 STAT1 JASPAR yes 101062282
chr6 30845633 30845641 HOXA5 JASPAR yes 70345367
chr6 30845633 30845641 HOXA5 JASPAR yes 101062283
chr6 30845635 30845643 BSX JASPAR yes 70345368
chr6 30845635 30845643 DLX6 JASPAR yes 70345369
chr6 30845635 30845643 MSX1 JASPAR yes 70345370
chr6 30845635 30845643 MSX2 JASPAR yes 70345371
chr6 30845635 30845643 BSX JASPAR yes 101062284
chr6 30845635 30845643 DLX6 JASPAR yes 101062285
chr6 30845635 30845643 MSX1 JASPAR yes 101062286
chr6 30845635 30845643 MSX2 JASPAR yes 101062287
chr6 30845647 30845651 ESR1 TRANSFAC yes 70345372
chr6 30845647 30845651 ESR1 TRANSFAC yes 101062288
chr6 30845647 30845658 USF1 JASPAR yes 70345373
chr6 30845647 30845658 USF2 JASPAR yes 70345374
chr6 30845647 30845658 USF1 JASPAR yes 101062289
chr6 30845647 30845658 USF2 JASPAR yes 101062290
chr6 30845648 30845655 USF2 TRANSFAC yes 70345375
chr6 30845648 30845655 USF2 TRANSFAC yes 101062291
chr6 30845650 30845655 USF2 TRANSFAC yes 70345376
chr6 30845650 30845655 USF2 TRANSFAC yes 101062292
chr6 30845662 30845681 CTCF JASPAR yes 70345377
chr6 30845662 30845681 CTCF JASPAR yes 101062293
chr6 30845677 30845687 GABPA JASPAR yes 70345378
chr6 30845677 30845687 GABPA JASPAR yes 101062294
chr6 30845678 30845686 EHF JASPAR yes 70345379
chr6 30845678 30845686 EHF JASPAR yes 101062295
chr6 30845690 30845694 NFE TRANSFAC yes 70345380
chr6 30845690 30845694 NFE TRANSFAC yes 101062296
chr6 30845708 30845717 GATA1 TRANSFAC yes 70345381
chr6 30845708 30845717 GATA1 TRANSFAC yes 101062297
SNP sites on vista51556[chr6:30845366-30845734]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30845542 rs185472796 T C
CTCF IRF1 NR2F1 PRDM1 RAD21 SMC3 STAT3
8950644
chr6 30845563 rs1264332 G C
CTCF IRF1 PRDM1 RAD21 RREB1 SMC3 STAT3
8950645
Genes possibly regulated by vista51556[chr6:30845366-30845734]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 98832
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 0.64 0.83 6354 69773
chr6 30876019 30894236 + VARS2 ENSG00000137411.12 30876019 0.64 0.72 6355 69715
chr6 30899130 30899952 - SFTA2 ENSG00000196260.3 30899952 1.0 0.0 6356 45782
chr6 30908749 30921998 + DPCR1 ENSG00000168631.7 30908749 0.99 0.93 6357 36985
Expression level of Genes
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miRNAs possibly regulated by vista51556[chr6:30845366-30845734]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results