EnhancerDB
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  3. vista5156[chr1:220427006-220427444]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5156[chr1:220427006-220427444]
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Tissue distribution of vista5156
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Transcription factor that possibly regulate vista5156[chr1:220427006-220427444]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 220427008 220427019 CDX2 JASPAR yes 118461125
chr1 220427010 220427019 CDX1 JASPAR yes 118461126
chr1 220427043 220427047 YY1 TRANSFAC yes 118461127
chr1 220427113 220427117 H1TF2 TRANSFAC yes 118461128
chr1 220427113 220427117 NFE TRANSFAC yes 118461129
chr1 220427113 220427117 SRF TRANSFAC yes 118461130
chr1 220427114 220427126 POU3F2 JASPAR yes 118461131
chr1 220427115 220427136 MAFG JASPAR yes 118461132
chr1 220427122 220427137 HSF1 JASPAR yes 118461133
chr1 220427123 220427136 HSF4 JASPAR yes 118461134
chr1 220427133 220427147 TCF7L2 JASPAR yes 118461135
chr1 220427139 220427154 NFYB JASPAR yes 118461136
chr1 220427141 220427154 DUXA JASPAR yes 118461137
chr1 220427141 220427157 NFYA JASPAR yes 118461138
chr1 220427142 220427153 DUX4 JASPAR yes 118461139
chr1 220427142 220427160 NFYA JASPAR yes 118461140
chr1 220427146 220427150 H1TF2 TRANSFAC yes 118461141
chr1 220427146 220427150 NFE TRANSFAC yes 118461142
chr1 220427146 220427150 SRF TRANSFAC yes 118461143
chr1 220427153 220427172 REST JASPAR yes 118461144
chr1 220427153 220427174 ZNF263 JASPAR yes 118461145
chr1 220427169 220427174 ETS2 TRANSFAC yes 118461146
chr1 220427180 220427193 NFKB1 JASPAR yes 118461147
chr1 220427180 220427193 NFKB2 JASPAR yes 118461148
chr1 220427181 220427191 NFKB1 JASPAR yes 118461149
chr1 220427181 220427192 NFKB1 JASPAR yes 118461150
chr1 220427185 220427191 NFE2 TRANSFAC yes 118461151
chr1 220427185 220427197 INSM1 JASPAR yes 118461152
chr1 220427199 220427211 TAL1 JASPAR yes 118461153
chr1 220427201 220427211 NEUROG2 JASPAR yes 118461154
chr1 220427201 220427213 TAL1 JASPAR yes 118461155
chr1 220427223 220427244 IRF1 JASPAR yes 118461156
chr1 220427227 220427242 PRDM1 JASPAR yes 118461157
chr1 220427229 220427250 IRF1 JASPAR yes 118461158
chr1 220427231 220427246 IRF9 JASPAR yes 118461159
chr1 220427232 220427246 IRF7 JASPAR yes 118461160
chr1 220427232 220427246 IRF8 JASPAR yes 118461161
chr1 220427234 220427246 IRF1 JASPAR yes 118461162
chr1 220427243 220427258 LEF1 JASPAR yes 118461163
chr1 220427244 220427255 FOXA1 JASPAR yes 118461164
chr1 220427244 220427259 AR JASPAR yes 118461165
chr1 220427244 220427265 IRF1 JASPAR yes 118461166
chr1 220427250 220427265 FOXP1 JASPAR yes 118461167
chr1 220427257 220427270 ZBTB18 JASPAR yes 118461168
chr1 220427258 220427268 FIGLA JASPAR yes 118461169
chr1 220427258 220427268 ID4 JASPAR yes 118461170
chr1 220427258 220427268 TCF3 JASPAR yes 118461171
chr1 220427258 220427268 TCF4 JASPAR yes 118461172
chr1 220427260 220427265 USF2 TRANSFAC yes 118461173
chr1 220427285 220427299 PLAG1 JASPAR yes 118461174
chr1 220427344 220427357 JUN JASPAR yes 118461175
chr1 220427344 220427358 SPIC JASPAR yes 118461176
chr1 220427429 220427439 ALX3 JASPAR yes 118461177
chr1 220427429 220427439 EMX1 JASPAR yes 118461178
chr1 220427429 220427439 EMX2 JASPAR yes 118461179
chr1 220427429 220427439 EN2 JASPAR yes 118461180
chr1 220427429 220427439 EVX1 JASPAR yes 118461181
chr1 220427429 220427439 EVX2 JASPAR yes 118461182
chr1 220427429 220427439 GBX2 JASPAR yes 118461183
chr1 220427429 220427439 HOXA2 JASPAR yes 118461184
chr1 220427429 220427439 HOXB2 JASPAR yes 118461185
chr1 220427429 220427439 HOXB3 JASPAR yes 118461186
chr1 220427429 220427439 MEOX1 JASPAR yes 118461187
chr1 220427429 220427439 MEOX2 JASPAR yes 118461188
chr1 220427429 220427439 MNX1 JASPAR yes 118461189
chr1 220427429 220427439 NOTO JASPAR yes 118461190
chr1 220427430 220427438 LMX1A JASPAR yes 118461191
chr1 220427430 220427438 LMX1B JASPAR yes 118461192
chr1 220427430 220427438 NKX6-1 JASPAR yes 118461193
chr1 220427430 220427438 NKX6-2 JASPAR yes 118461194
chr1 220427430 220427438 PDX1 JASPAR yes 118461195
chr1 220427430 220427438 VAX1 JASPAR yes 118461196
chr1 220427430 220427438 VAX2 JASPAR yes 118461197
chr1 220427430 220427438 VSX1 JASPAR yes 118461198
SNP sites on vista5156[chr1:220427006-220427444]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 220427107 rs183012520 G T no 959109
chr1 220427144 rs147558065 A C
DUX4 DUXA NFYA NFYB TCF7L2
959110
Genes possibly regulated by vista5156[chr1:220427006-220427444]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 220321635 220445796 - RAB3GAP2 ENSG00000118873.11 220445796 0.68 0.99 1856 81648
Expression level of Genes
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miRNAs possibly regulated by vista5156[chr1:220427006-220427444]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results