EnhancerDB
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  3. vista51560[chr6:30923441-30923743]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51560[chr6:30923441-30923743]
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Tissue distribution of vista51560
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Transcription factor that possibly regulate vista51560[chr6:30923441-30923743]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 30923088 30923884 POLR2A UCSC Txn Factor no Conserved 108539590
chr6 30923261 30923651 TAF1 UCSC Txn Factor no Conserved 108539591
chr6 30923273 30923755 MAZ UCSC Txn Factor no Conserved 108539592
chr6 30923309 30923671 GABPA UCSC Txn Factor no Conserved 108539593
chr6 30923397 30923655 RUNX3 UCSC Txn Factor no Conserved 108539594
chr6 30923435 30923729 EGR1 UCSC Txn Factor no Conserved 108539595
chr6 30923449 30923459 ELK1 JASPAR yes 70345492
chr6 30923451 30923460 ELK4 JASPAR yes 70345493
chr6 30923451 30923461 ELK1 JASPAR yes 70345494
chr6 30923451 30923461 ELK3 JASPAR yes 70345495
chr6 30923451 30923461 ETS1 JASPAR yes 70345496
chr6 30923451 30923461 ETV1 JASPAR yes 70345497
chr6 30923451 30923461 ETV4 JASPAR yes 70345498
chr6 30923451 30923461 ETV5 JASPAR yes 70345499
chr6 30923451 30923461 FEV JASPAR yes 70345500
chr6 30923451 30923461 FLI1 JASPAR yes 70345501
chr6 30923451 30923461 GABPA JASPAR yes 70345502
chr6 30923451 30923462 ELK4 JASPAR yes 70345503
chr6 30923451 30923462 FLI1 JASPAR yes 70345504
chr6 30923453 30923459 ETS1 JASPAR yes 70345505
chr6 30923453 30923459 SPI1 JASPAR yes 70345506
chr6 30923462 30923466 NFE TRANSFAC yes 70345507
chr6 30923476 30923491 ZIC4 JASPAR yes 70345508
chr6 30923477 30923491 GLIS2 JASPAR yes 70345509
chr6 30923477 30923491 GLIS3 JASPAR yes 70345510
chr6 30923477 30923491 ZIC1 JASPAR yes 70345511
chr6 30923506 30923515 SP1 TRANSFAC yes 70345512
chr6 30923510 30923521 E2F6 JASPAR yes 70345513
chr6 30923527 30923541 SPI1 JASPAR yes 70345514
chr6 30923538 30923547 THAP1 JASPAR yes 70345515
chr6 30923541 30923546 SP1 TRANSFAC yes 70345516
chr6 30923589 30923599 SP1 JASPAR yes 70345517
chr6 30923591 30923596 SP1 TRANSFAC yes 70345518
chr6 30923591 30923597 SP1 TRANSFAC yes 70345519
chr6 30923591 30923598 SP1 TRANSFAC yes 70345520
chr6 30923592 30923600 WT1 TRANSFAC yes 70345521
chr6 30923595 30923609 PLAG1 JASPAR yes 70345522
chr6 30923627 30923633 SP1 TRANSFAC yes 70345523
chr6 30923627 30923637 SP1 JASPAR yes 70345524
chr6 30923631 30923652 ZNF263 JASPAR yes 70345525
chr6 30923634 30923644 SP1 JASPAR yes 70345526
chr6 30923635 30923643 SP1 TRANSFAC yes 70345527
chr6 30923635 30923645 SP1 JASPAR yes 70345528
chr6 30923638 30923650 INSM1 JASPAR yes 70345529
chr6 30923642 30923650 SP1 TRANSFAC yes 70345530
chr6 30923642 30923652 SP1 JASPAR yes 70345531
chr6 30923643 30923658 TFAP2C JASPAR yes 70345532
chr6 30923644 30923658 GLIS3 JASPAR yes 70345533
chr6 30923645 30923657 TFAP2A JASPAR yes 70345534
chr6 30923645 30923657 TFAP2B JASPAR yes 70345535
chr6 30923645 30923657 TFAP2C JASPAR yes 70345536
chr6 30923645 30923659 EBF1 JASPAR yes 70345537
chr6 30923645 30923660 TFAP2A JASPAR yes 70345538
chr6 30923646 30923657 EBF1 JASPAR yes 70345539
chr6 30923653 30923659 MAZ TRANSFAC yes 70345540
chr6 30923657 30923662 SP1 TRANSFAC yes 70345541
chr6 30923696 30923707 ESRRA JASPAR yes 70345542
chr6 30923704 30923715 CDX2 JASPAR yes 70345543
chr6 30923705 30923716 HOXA10 JASPAR yes 70345544
chr6 30923705 30923716 HOXD12 JASPAR yes 70345545
chr6 30923706 30923715 CDX1 JASPAR yes 70345546
chr6 30923706 30923716 HOXA13 JASPAR yes 70345547
chr6 30923706 30923716 HOXB13 JASPAR yes 70345548
chr6 30923706 30923716 HOXD13 JASPAR yes 70345549
chr6 30923708 30923723 IRF9 JASPAR yes 70345550
chr6 30923711 30923723 IRF1 JASPAR yes 70345551
SNP sites on vista51560[chr6:30923441-30923743]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 30923527 rs17189763 C T
EGR1 GABPA MAZ POLR2A RUNX3 SPI1 TAF1
8950818
chr6 30923564 rs541895045 G A
EGR1 GABPA MAZ POLR2A RUNX3 TAF1
8950819
chr6 30923608 rs151334887 C G
EGR1 GABPA MAZ PLAG1 POLR2A RUNX3 TAF1
8950820
chr6 30923629 rs2532920 C T
EGR1 GABPA MAZ POLR2A RUNX3 SP1 TAF1
8950821
chr6 30923704 rs540145764 T C
CDX2 EGR1 ESRRA MAZ POLR2A
8950822
chr6 30923735 rs73727141 T C
MAZ POLR2A
8950823
Genes possibly regulated by vista51560[chr6:30923441-30923743]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30844198 30867933 + DDR1 ENSG00000204580.7 30844198 0.83 0.82 6353 20757
chr6 30875961 30881883 + GTF2H4 ENSG00000213780.6 30875961 0.64 0.83 6354 52520
chr6 30876019 30894236 + VARS2 ENSG00000137411.12 30876019 0.64 0.72 6355 52578
chr6 30899130 30899952 - SFTA2 ENSG00000196260.3 30899952 1.0 0.0 6356 76511
chr6 30908749 30921998 + DPCR1 ENSG00000168631.7 30908749 0.99 0.93 6357 85308
chr6 30951495 30957680 + MUC21 ENSG00000204544.5 30951495 1.0 0.0 6358 72248
chr6 30978251 31003179 + MUC22 ENSG00000261272.1 30978251 0.98 0.97 6359 45492
Expression level of Genes
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miRNAs possibly regulated by vista51560[chr6:30923441-30923743]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results