EnhancerDB
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  3. vista51562[chr6:31008975-31009347]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51562[chr6:31008975-31009347]
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Tissue distribution of vista51562
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Transcription factor that possibly regulate vista51562[chr6:31008975-31009347]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 31008959 31008980 IRF1 JASPAR yes 70345569
chr6 31008959 31008980 IRF1 JASPAR yes 101067574
chr6 31008961 31008976 PRDM1 JASPAR yes 70345570
chr6 31008961 31008976 PRDM1 JASPAR yes 101067575
chr6 31008970 31008975 GATA1 TRANSFAC yes 70345571
chr6 31008970 31008975 GATA1 TRANSFAC yes 101067577
chr6 31008970 31008976 GATA3 JASPAR yes 70345572
chr6 31008970 31008976 GATA3 JASPAR yes 101067578
chr6 31008978 31008989 NFE2L2 JASPAR yes 70345573
chr6 31008978 31008989 NFE2L2 JASPAR yes 101067579
chr6 31008989 31008995 SOX10 JASPAR yes 70345574
chr6 31008989 31008995 SOX10 JASPAR yes 101067580
chr6 31008999 31009003 YY1 TRANSFAC yes 70345575
chr6 31008999 31009003 YY1 TRANSFAC yes 101067581
chr6 31009019 31009034 NR2C2 JASPAR yes 70345576
chr6 31009019 31009034 NR2C2 JASPAR yes 101067582
chr6 31009025 31009034 THAP1 JASPAR yes 70345577
chr6 31009025 31009034 THAP1 JASPAR yes 101067583
chr6 31009026 31009041 TFAP2A JASPAR yes 70345578
chr6 31009026 31009041 TFAP2C JASPAR yes 70345579
chr6 31009026 31009041 TFAP2A JASPAR yes 101067584
chr6 31009026 31009041 TFAP2C JASPAR yes 101067585
chr6 31009037 31009046 VENTX JASPAR yes 70345580
chr6 31009037 31009046 VENTX JASPAR yes 101067586
chr6 31009041 31009047 ESR1 TRANSFAC yes 70345581
chr6 31009041 31009047 ESR1 TRANSFAC yes 101067587
chr6 31009043 31009047 ESR1 TRANSFAC yes 70345582
chr6 31009043 31009047 ESR1 TRANSFAC yes 101067588
chr6 31009048 31009064 NFYA JASPAR yes 70345583
chr6 31009048 31009064 NFYA JASPAR yes 101067589
chr6 31009053 31009057 H1TF2 TRANSFAC yes 70345584
chr6 31009053 31009057 NFE TRANSFAC yes 70345585
chr6 31009053 31009057 SRF TRANSFAC yes 70345586
chr6 31009053 31009057 H1TF2 TRANSFAC yes 101067590
chr6 31009053 31009057 NFE TRANSFAC yes 101067591
chr6 31009053 31009057 SRF TRANSFAC yes 101067592
chr6 31009067 31009081 RXRB JASPAR yes 70345587
chr6 31009067 31009081 RXRG JASPAR yes 70345588
chr6 31009067 31009081 RXRB JASPAR yes 101067593
chr6 31009067 31009081 RXRG JASPAR yes 101067594
chr6 31009077 31009082 ATF1 TRANSFAC yes 70345589
chr6 31009077 31009082 ATF1 TRANSFAC yes 101067595
chr6 31009116 31009119 MYB TRANSFAC yes 70345590
chr6 31009116 31009119 MYB TRANSFAC yes 101067596
chr6 31009132 31009147 FOXP1 JASPAR yes 70345591
chr6 31009132 31009147 FOXP1 JASPAR yes 101067597
chr6 31009133 31009154 IRF1 JASPAR yes 70345592
chr6 31009133 31009154 IRF1 JASPAR yes 101067598
chr6 31009135 31009146 FOXP2 JASPAR yes 70345593
chr6 31009135 31009146 FOXP2 JASPAR yes 101067599
chr6 31009135 31009150 IRF9 JASPAR yes 70345594
chr6 31009135 31009150 IRF9 JASPAR yes 101067600
chr6 31009136 31009144 FOXO3 JASPAR yes 70345595
chr6 31009136 31009144 FOXO3 JASPAR yes 101067601
chr6 31009136 31009150 IRF8 JASPAR yes 70345596
chr6 31009136 31009150 IRF8 JASPAR yes 101067602
chr6 31009137 31009151 STAT1 JASPAR yes 70345597
chr6 31009137 31009151 STAT1 JASPAR yes 101067603
chr6 31009137 31009152 STAT2 JASPAR yes 70345598
chr6 31009137 31009152 STAT2 JASPAR yes 101067604
chr6 31009155 31009160 GATA2 JASPAR yes 70345599
chr6 31009155 31009160 GATA2 JASPAR yes 101067605
chr6 31009158 31009162 YY1 TRANSFAC yes 70345600
chr6 31009158 31009162 YY1 TRANSFAC yes 101067606
chr6 31009159 31009173 PAX6 JASPAR yes 70345601
chr6 31009159 31009173 PAX6 JASPAR yes 101067607
chr6 31009164 31009178 TCF7L2 JASPAR yes 70345602
chr6 31009164 31009178 TCF7L2 JASPAR yes 101067608
chr6 31009164 31009179 LEF1 JASPAR yes 70345603
chr6 31009164 31009179 LEF1 JASPAR yes 101067609
chr6 31009194 31009202 FOXG1 JASPAR yes 70345604
chr6 31009194 31009202 FOXG1 JASPAR yes 101067610
chr6 31009194 31009205 FOXB1 JASPAR yes 70345605
chr6 31009194 31009205 FOXC1 JASPAR yes 70345606
chr6 31009194 31009205 FOXB1 JASPAR yes 101067611
chr6 31009194 31009205 FOXC1 JASPAR yes 101067612
chr6 31009199 31009203 TEAD2 TRANSFAC yes 70345607
chr6 31009199 31009203 TEAD2 TRANSFAC yes 101067613
chr6 31009199 31009204 TBP TRANSFAC yes 70345608
chr6 31009199 31009204 TBP TRANSFAC yes 101067614
chr6 31009199 31009205 TFIID TRANSFAC yes 70345609
chr6 31009199 31009205 TFIID TRANSFAC yes 101067615
chr6 31009206 31009215 NKX2-8 JASPAR yes 70345610
chr6 31009206 31009215 NKX2-8 JASPAR yes 101067616
chr6 31009226 31009231 SP1 TRANSFAC yes 70345611
chr6 31009226 31009231 SP1 TRANSFAC yes 101067617
chr6 31009252 31009263 FOSL2 JASPAR yes 70345612
chr6 31009252 31009263 FOSL2 JASPAR yes 101067618
chr6 31009253 31009264 FOS JASPAR yes 70345613
chr6 31009253 31009264 JUND JASPAR yes 70345614
chr6 31009253 31009264 FOS JASPAR yes 101067619
chr6 31009253 31009264 JUND JASPAR yes 101067620
chr6 31009266 31009270 ESR1 TRANSFAC yes 70345615
chr6 31009266 31009270 ESR1 TRANSFAC yes 101067621
chr6 31009286 31009291 SP1 TRANSFAC yes 70345616
chr6 31009286 31009291 SP1 TRANSFAC yes 101067622
chr6 31009294 31009298 YY1 TRANSFAC yes 70345617
chr6 31009294 31009298 YY1 TRANSFAC yes 101067623
chr6 31009317 31009332 HNF1A JASPAR yes 70345618
chr6 31009317 31009332 HNF1A JASPAR yes 101067624
chr6 31009318 31009330 HNF1B JASPAR yes 70345619
chr6 31009318 31009330 HNF1B JASPAR yes 101067625
chr6 31009318 31009331 HNF1B JASPAR yes 70345620
chr6 31009318 31009331 HNF1B JASPAR yes 101067626
chr6 31009324 31009328 YY1 TRANSFAC yes 70345621
chr6 31009324 31009328 YY1 TRANSFAC yes 101067627
chr6 31009339 31009354 ZIC3 JASPAR yes 70345622
chr6 31009339 31009354 ZIC4 JASPAR yes 70345623
chr6 31009339 31009354 ZIC3 JASPAR yes 101067628
chr6 31009339 31009354 ZIC4 JASPAR yes 101067629
chr6 31009340 31009354 ZIC1 JASPAR yes 70345624
chr6 31009340 31009354 ZIC1 JASPAR yes 101067630
SNP sites on vista51562[chr6:31008975-31009347]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 31008985 rs9500872 G A
NFE2L2
8951592
chr6 31008996 rs191634447 A C,G,T no 8951593
chr6 31009055 rs2517546 C T
H1TF2 NFE NFYA SRF
8951594
chr6 31009070 rs533946583 A T
RXRB RXRG
8951595
chr6 31009079 rs9262563 C A
ATF1 RXRB RXRG
8951596
chr6 31009094 rs13191523 A G no 8951597
chr6 31009137 rs2523901 T C
FOXO3 FOXP1 FOXP2 IRF1 IRF8 IRF9 STAT1 STAT2
8951598
chr6 31009138 rs183772840 G A
FOXO3 FOXP1 FOXP2 IRF1 IRF8 IRF9 STAT1 STAT2
8951599
chr6 31009152 rs542293830 C T
IRF1 STAT2
8951600
chr6 31009195 rs9262565 A G
FOXB1 FOXC1 FOXG1
8951601
chr6 31009198 rs9262566 T C
FOXB1 FOXC1 FOXG1
8951602
chr6 31009209 rs9262567 A G
NKX2-8
8951603
chr6 31009235 rs10947128 T C no 8951604
chr6 31009300 rs186573296 G C no 8951605
chr6 31009302 rs2517545 A G no 8951606
Genes possibly regulated by vista51562[chr6:31008975-31009347]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 30951495 30957680 + MUC21 ENSG00000204544.5 30951495 1.0 0.0 6358 42520
chr6 30978251 31003179 + MUC22 ENSG00000261272.1 30978251 0.98 0.97 6359 69276
chr6 31079000 31080336 - C6orf15 ENSG00000204542.2 31080336 0.95 1.0 6360 29011
chr6 31082527 31107869 + PSORS1C1 ENSG00000204540.6 31082527 0.8 0.92 6361 26820
chr6 31082867 31088223 - CDSN ENSG00000204539.3 31088223 0.99 0.97 6362 21124
chr6 31105313 31107127 - PSORS1C2 ENSG00000204538.3 31107127 0.73 0.94 6363 2220
Expression level of Genes
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miRNAs possibly regulated by vista51562[chr6:31008975-31009347]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results