EnhancerDB
  1. Home
  2. Enhancers
  3. vista5157[chr1:220443411-220443639]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5157[chr1:220443411-220443639]
Back to top
Tissue distribution of vista5157
Back to top
Transcription factor that possibly regulate vista5157[chr1:220443411-220443639]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 220443422 220443436 ONECUT3 JASPAR yes 118461199
chr1 220443423 220443439 NFYA JASPAR yes 118461200
chr1 220443424 220443442 NFYA JASPAR yes 118461201
chr1 220443427 220443442 MAFK JASPAR yes 118461202
chr1 220443428 220443432 H1TF2 TRANSFAC yes 118461203
chr1 220443428 220443432 NFE TRANSFAC yes 118461204
chr1 220443428 220443432 SRF TRANSFAC yes 118461205
chr1 220443428 220443442 POU1F1 JASPAR yes 118461206
chr1 220443429 220443442 POU3F3 JASPAR yes 118461207
chr1 220443436 220443440 YY1 TRANSFAC yes 118461208
chr1 220443443 220443447 NFE TRANSFAC yes 118461209
chr1 220443444 220443449 GATA2 JASPAR yes 118461210
chr1 220443455 220443468 NR2F1 JASPAR yes 118461211
chr1 220443471 220443475 YY1 TRANSFAC yes 118461212
chr1 220443477 220443495 MAFF JASPAR yes 118461213
chr1 220443479 220443490 NRL JASPAR yes 118461214
chr1 220443479 220443494 MAFK JASPAR yes 118461215
chr1 220443516 220443524 EHF JASPAR yes 118461216
chr1 220443541 220443552 USF2 JASPAR yes 118461217
chr1 220443542 220443552 TFEB JASPAR yes 118461218
chr1 220443542 220443552 TFEC JASPAR yes 118461219
chr1 220443550 220443564 SPIC JASPAR yes 118461220
chr1 220443551 220443572 IRF1 JASPAR yes 118461221
chr1 220443551 220443572 ZNF263 JASPAR yes 118461222
chr1 220443553 220443560 SPIB JASPAR yes 118461223
chr1 220443553 220443574 IRF1 JASPAR yes 118461224
chr1 220443554 220443575 ZNF263 JASPAR yes 118461225
chr1 220443557 220443578 ZNF263 JASPAR yes 118461226
chr1 220443566 220443587 ZNF263 JASPAR yes 118461227
chr1 220443567 220443588 ZNF263 JASPAR yes 118461228
chr1 220443583 220443598 RFX5 JASPAR yes 118461229
chr1 220443591 220443594 MYB TRANSFAC yes 118461230
SNP sites on vista5157[chr1:220443411-220443639]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 220443463 rs114365814 C T
NR2F1
959118
chr1 220443592 rs539419761 T C
MYB RFX5
959119
chr1 220443593 rs78359370 A T
MYB RFX5
959120
Genes possibly regulated by vista5157[chr1:220443411-220443639]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 220321635 220445796 - RAB3GAP2 ENSG00000118873.11 220445796 0.68 0.99 1856 97843
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5157[chr1:220443411-220443639]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results