EnhancerDB
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  3. vista51578[chr6:31789672-31790268]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51578[chr6:31789672-31790268]
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Tissue distribution of vista51578
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Transcription factor that possibly regulate vista51578[chr6:31789672-31790268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 31788988 31791228 POLR2A UCSC Txn Factor no Conserved 108539626
chr6 31788988 31791228 POLR2A UCSC Txn Factor no Conserved 108539627
chr6 31789375 31790302 TAF1 UCSC Txn Factor no Conserved 108539628
chr6 31789491 31789767 EGR1 UCSC Txn Factor no Conserved 108539629
chr6 31789502 31790274 TBP UCSC Txn Factor no Conserved 108539630
chr6 31789869 31790177 MAFK UCSC Txn Factor no Conserved 108539631
chr6 31789911 31790196 MAFF UCSC Txn Factor no Conserved 108539632
chr6 31789690 31789696 TCF4 TRANSFAC yes 70346446
chr6 31789694 31789705 NFIL3 JASPAR yes 70346447
chr6 31789709 31789713 H1TF2 TRANSFAC yes 70346448
chr6 31789709 31789713 NFE TRANSFAC yes 70346449
chr6 31789709 31789713 SRF TRANSFAC yes 70346450
chr6 31789713 31789717 YY1 TRANSFAC yes 70346451
chr6 31789721 31789732 HOXC13 JASPAR yes 70346452
chr6 31789756 31789760 H4TF2 TRANSFAC yes 70346453
chr6 31789763 31789784 ZNF263 JASPAR yes 70346454
chr6 31789773 31789782 PITX3 JASPAR yes 70346455
chr6 31789773 31789783 GSC2 JASPAR yes 70346456
chr6 31789773 31789783 GSC JASPAR yes 70346457
chr6 31789774 31789782 OTX1 JASPAR yes 70346458
chr6 31789774 31789782 OTX2 JASPAR yes 70346459
chr6 31789774 31789782 RHOXF1 JASPAR yes 70346460
chr6 31789776 31789794 SRF JASPAR yes 70346461
chr6 31789781 31789792 STAT3 JASPAR yes 70346462
chr6 31789784 31789794 NFATC3 JASPAR yes 70346463
chr6 31789786 31789793 NFATC2 JASPAR yes 70346464
chr6 31789820 31789825 GATA2 JASPAR yes 70346465
chr6 31789826 31789845 REST JASPAR yes 70346466
chr6 31789842 31789848 SP1 TRANSFAC yes 70346467
chr6 31789842 31789852 SP1 JASPAR yes 70346468
chr6 31789843 31789858 TFAP2A JASPAR yes 70346469
chr6 31789843 31789858 TFAP2C JASPAR yes 70346470
chr6 31789844 31789849 SP1 TRANSFAC yes 70346471
chr6 31789845 31789857 TFAP2A JASPAR yes 70346472
chr6 31789845 31789857 TFAP2B JASPAR yes 70346473
chr6 31789845 31789857 TFAP2C JASPAR yes 70346474
chr6 31789845 31789860 TFAP2A JASPAR yes 70346475
chr6 31789845 31789860 TFAP2C JASPAR yes 70346476
chr6 31789864 31789870 SP1 TRANSFAC yes 70346477
chr6 31789868 31789889 ZNF263 JASPAR yes 70346478
chr6 31789870 31789891 ZNF263 JASPAR yes 70346479
chr6 31789871 31789892 ZNF263 JASPAR yes 70346480
chr6 31789872 31789893 ZNF263 JASPAR yes 70346481
chr6 31789873 31789894 ZNF263 JASPAR yes 70346482
chr6 31789878 31789887 SP1 TRANSFAC yes 70346483
chr6 31789878 31789898 RREB1 JASPAR yes 70346484
chr6 31789879 31789885 SP1 TRANSFAC yes 70346485
chr6 31789879 31789889 SP1 JASPAR yes 70346486
chr6 31789880 31789887 SP1 TRANSFAC yes 70346487
chr6 31789881 31789886 SP1 TRANSFAC yes 70346488
chr6 31789881 31789887 SP1 TRANSFAC yes 70346489
chr6 31789881 31789888 SP1 TRANSFAC yes 70346490
chr6 31789883 31789893 ZNF740 JASPAR yes 70346491
chr6 31789883 31789904 ZNF263 JASPAR yes 70346492
chr6 31789884 31789894 SP1 JASPAR yes 70346493
chr6 31789884 31789894 ZNF740 JASPAR yes 70346494
chr6 31789885 31789895 SP1 JASPAR yes 70346495
chr6 31789885 31789895 ZNF740 JASPAR yes 70346496
chr6 31789886 31789896 ZNF740 JASPAR yes 70346497
chr6 31789887 31789907 RREB1 JASPAR yes 70346498
chr6 31789888 31789898 ZNF740 JASPAR yes 70346499
chr6 31789888 31789909 ZNF263 JASPAR yes 70346500
chr6 31789893 31789914 ZNF263 JASPAR yes 70346501
chr6 31789896 31789917 ZNF263 JASPAR yes 70346502
chr6 31789898 31789904 MZF1 JASPAR yes 70346503
chr6 31789907 31789921 SPIC JASPAR yes 70346504
chr6 31789948 31789957 THAP1 JASPAR yes 70346505
chr6 31789948 31789963 HSF1 JASPAR yes 70346506
chr6 31789949 31789962 HSF1 JASPAR yes 70346507
chr6 31789949 31789962 HSF2 JASPAR yes 70346508
chr6 31789949 31789962 HSF4 JASPAR yes 70346509
chr6 31789953 31789968 HSF1 JASPAR yes 70346510
chr6 31789954 31789967 HSF1 JASPAR yes 70346511
chr6 31789954 31789967 HSF2 JASPAR yes 70346512
chr6 31789954 31789967 HSF4 JASPAR yes 70346513
chr6 31789958 31789973 HSF1 JASPAR yes 70346514
chr6 31789959 31789972 HSF1 JASPAR yes 70346515
chr6 31789959 31789972 HSF2 JASPAR yes 70346516
chr6 31789959 31789972 HSF4 JASPAR yes 70346517
chr6 31789963 31789978 ESR2 JASPAR yes 70346518
chr6 31789970 31789981 ESRRA JASPAR yes 70346519
chr6 31789970 31789981 ESRRB JASPAR yes 70346520
chr6 31789971 31789979 NR4A2 JASPAR yes 70346521
chr6 31789972 31789982 RORA JASPAR yes 70346522
chr6 31789991 31790002 NFE2L2 JASPAR yes 70346523
chr6 31790006 31790019 NFKB2 JASPAR yes 70346524
chr6 31790007 31790018 NFKB1 JASPAR yes 70346525
chr6 31790014 31790020 MZF1 JASPAR yes 70346526
chr6 31790040 31790051 E2F6 JASPAR yes 70346527
chr6 31790068 31790083 LEF1 JASPAR yes 70346528
chr6 31790088 31790103 MEF2A JASPAR yes 70346529
chr6 31790090 31790102 HNF1B JASPAR yes 70346530
chr6 31790090 31790102 MEF2A JASPAR yes 70346531
chr6 31790090 31790102 MEF2B JASPAR yes 70346532
chr6 31790090 31790102 MEF2D JASPAR yes 70346533
chr6 31790091 31790101 MEF2A JASPAR yes 70346534
chr6 31790094 31790098 YY1 TRANSFAC yes 70346535
chr6 31790098 31790101 MYB TRANSFAC yes 70346536
chr6 31790098 31790108 HINFP JASPAR yes 70346537
chr6 31790101 31790111 ELK1 JASPAR yes 70346538
chr6 31790101 31790116 HSF1 JASPAR yes 70346539
chr6 31790102 31790115 HSF1 JASPAR yes 70346540
chr6 31790102 31790115 HSF2 JASPAR yes 70346541
chr6 31790102 31790115 HSF4 JASPAR yes 70346542
chr6 31790105 31790111 ETS1 JASPAR yes 70346543
chr6 31790105 31790111 SPI1 JASPAR yes 70346544
chr6 31790125 31790134 HIC2 JASPAR yes 70346545
chr6 31790126 31790132 NFIC JASPAR yes 70346546
chr6 31790132 31790148 RFX2 JASPAR yes 70346547
chr6 31790132 31790148 RFX5 JASPAR yes 70346548
chr6 31790133 31790152 RFX2 JASPAR yes 70346549
chr6 31790143 31790146 MYB TRANSFAC yes 70346550
chr6 31790146 31790157 NFKB1 JASPAR yes 70346551
chr6 31790146 31790159 NFKB1 JASPAR yes 70346552
chr6 31790146 31790159 NFKB2 JASPAR yes 70346553
chr6 31790147 31790157 NFKB1 JASPAR yes 70346554
chr6 31790147 31790158 NFKB1 JASPAR yes 70346555
chr6 31790151 31790172 ZNF263 JASPAR yes 70346556
chr6 31790152 31790162 MZF1 JASPAR yes 70346557
chr6 31790153 31790174 ZNF263 JASPAR yes 70346558
chr6 31790154 31790175 ZNF263 JASPAR yes 70346559
chr6 31790155 31790161 SP1 TRANSFAC yes 70346560
chr6 31790158 31790173 PRDM1 JASPAR yes 70346561
chr6 31790160 31790181 ZNF263 JASPAR yes 70346562
chr6 31790176 31790187 CEBPA JASPAR yes 70346563
chr6 31790180 31790195 AR JASPAR yes 70346564
chr6 31790192 31790196 NFE TRANSFAC yes 70346565
chr6 31790196 31790202 ETS1 JASPAR yes 70346566
chr6 31790201 31790222 ZNF263 JASPAR yes 70346567
chr6 31790210 31790230 ESR1 JASPAR yes 70346568
chr6 31790210 31790231 ZNF263 JASPAR yes 70346569
chr6 31790216 31790237 ZNF263 JASPAR yes 70346570
chr6 31790219 31790240 ZNF263 JASPAR yes 70346571
chr6 31790226 31790247 ZNF263 JASPAR yes 70346572
chr6 31790229 31790234 SP1 TRANSFAC yes 70346573
chr6 31790231 31790236 TFAP2A TRANSFAC yes 70346574
chr6 31790231 31790237 MZF1 JASPAR yes 70346575
chr6 31790233 31790238 ETS2 TRANSFAC yes 70346576
chr6 31790252 31790257 SP1 TRANSFAC yes 70346577
SNP sites on vista51578[chr6:31789672-31790268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 31789674 rs545985830 G A
EGR1 POLR2A TAF1 TBP
8959099
chr6 31789892 rs3763298 C A,G
MAFK POLR2A RREB1 SP1 TAF1 TBP ZNF263 ZNF740
8959100
chr6 31790089 rs114691438 A G
MAFF MAFK MEF2A POLR2A TAF1 TBP
8959101
chr6 31790169 rs183597695 C T
MAFF MAFK POLR2A PRDM1 TAF1 TBP ZNF263
8959102
chr6 31790197 rs569954199 C G,T
ETS1 POLR2A TAF1 TBP
8959103
Genes possibly regulated by vista51578[chr6:31789672-31790268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 31694815 31698394 - DDAH2 ENSG00000213722.4 31698394 0.74 0.91 6400 8722
chr6 31698358 31707540 - CLIC1 ENSG00000213719.4 31707540 0.73 0.91 6401 17868
chr6 31707725 31732622 + MSH5 ENSG00000204410.10 31707725 0.83 0.87 6402 18053
chr6 31707797 31732628 + MSH5-SAPCD1 ENSG00000255152.4 31707797 0.94 0.94 6403 18125
chr6 31730576 31732628 + SAPCD1 ENSG00000228727.4 31730576 0.76 0.94 6404 40904
chr6 31733367 31745108 - VWA7 ENSG00000204396.6 31745108 0.88 0.74 6405 55436
chr6 31745295 31763730 - VARS ENSG00000204394.8 31763730 0.77 0.91 6406 74058
chr6 31765173 31774761 - LSM2 ENSG00000204392.6 31774761 0.82 0.88 6407 85089
chr6 31777396 31783437 - HSPA1L ENSG00000204390.8 31783437 0.73 0.87 6408 93765
chr6 31783291 31785723 + HSPA1A ENSG00000204389.8 31783291 0.88 0.92 6409 93619
chr6 31795512 31798031 + HSPA1B ENSG00000204388.5 31795512 0.91 0.68 6410 94756
chr6 31802385 31807541 + C6orf48 ENSG00000204387.8 31802385 0.79 0.83 6411 87883
chr6 31825436 31830683 - NEU1 ENSG00000204386.6 31830683 0.74 0.92 6412 59585
chr6 31830969 31846823 - SLC44A4 ENSG00000204385.6 31846823 0.88 0.93 6413 43445
chr6 31847536 31865464 - EHMT2 ENSG00000204371.7 31865464 0.66 0.61 6414 24804
chr6 31865562 31913449 + C2 ENSG00000166278.10 31865562 0.98 1.0 6415 24706
chr6 31867384 31869769 - ZBTB12 ENSG00000204366.3 31869769 0.84 0.74 6416 20499
Expression level of Genes
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miRNAs possibly regulated by vista51578[chr6:31789672-31790268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results