EnhancerDB
  1. Home
  2. Enhancers
  3. vista51595[chr6:32555783-32556185]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51595[chr6:32555783-32556185]
Back to top
Tissue distribution of vista51595
Back to top
Transcription factor that possibly regulate vista51595[chr6:32555783-32556185]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32555140 32557813 POLR2A UCSC Txn Factor no Conserved 108539659
chr6 32555789 32555810 IRF1 JASPAR yes 70347173
chr6 32555789 32555810 IRF1 JASPAR yes 101117694
chr6 32555791 32555806 PRDM1 JASPAR yes 70347174
chr6 32555791 32555806 PRDM1 JASPAR yes 101117695
chr6 32555793 32555807 IRF7 JASPAR yes 70347175
chr6 32555793 32555807 IRF8 JASPAR yes 70347176
chr6 32555793 32555807 IRF7 JASPAR yes 101117696
chr6 32555793 32555807 IRF8 JASPAR yes 101117697
chr6 32555798 32555802 YY1 TRANSFAC yes 70347177
chr6 32555798 32555802 YY1 TRANSFAC yes 101117698
chr6 32555818 32555828 SP1 JASPAR yes 70347178
chr6 32555818 32555828 SP1 JASPAR yes 101117699
chr6 32555847 32555868 ZNF263 JASPAR yes 70347179
chr6 32555847 32555868 ZNF263 JASPAR yes 101117700
chr6 32555849 32555863 SPI1 JASPAR yes 70347180
chr6 32555849 32555863 SPI1 JASPAR yes 101117701
chr6 32555850 32555871 ZNF263 JASPAR yes 70347181
chr6 32555850 32555871 ZNF263 JASPAR yes 101117702
chr6 32555888 32555903 FOXP1 JASPAR yes 70347182
chr6 32555888 32555903 FOXP1 JASPAR yes 101117703
chr6 32555889 32555903 GATA2 JASPAR yes 70347183
chr6 32555889 32555903 GATA2 JASPAR yes 101117704
chr6 32555891 32555899 GATA3 JASPAR yes 70347184
chr6 32555891 32555899 GATA3 JASPAR yes 101117705
chr6 32555891 32555905 STAT1 JASPAR yes 70347185
chr6 32555891 32555905 STAT1 JASPAR yes 101117706
chr6 32555912 32555926 SPIC JASPAR yes 70347186
chr6 32555912 32555926 SPIC JASPAR yes 101117707
chr6 32555913 32555927 STAT1 JASPAR yes 70347187
chr6 32555913 32555927 STAT1 JASPAR yes 101117708
chr6 32555917 32555922 ETS2 TRANSFAC yes 70347188
chr6 32555917 32555922 ETS2 TRANSFAC yes 101117709
chr6 32555917 32555925 FEV JASPAR yes 70347189
chr6 32555917 32555925 FEV JASPAR yes 101117710
chr6 32555926 32555936 HOXD13 JASPAR yes 70347190
chr6 32555926 32555936 HOXD13 JASPAR yes 101117711
chr6 32555926 32555937 HOXA10 JASPAR yes 70347191
chr6 32555926 32555937 HOXA10 JASPAR yes 101117712
chr6 32555928 32555940 MEF2D JASPAR yes 70347192
chr6 32555928 32555940 MEF2D JASPAR yes 101117713
chr6 32555934 32555943 JDP2 JASPAR yes 70347193
chr6 32555934 32555943 JDP2 JASPAR yes 101117714
chr6 32555935 32555946 BATF JASPAR yes 70347194
chr6 32555935 32555946 BATF JASPAR yes 101117715
chr6 32555948 32555963 RFX5 JASPAR yes 70347195
chr6 32555948 32555963 RFX5 JASPAR yes 101117716
chr6 32555948 32555968 ESR1 JASPAR yes 70347196
chr6 32555948 32555968 ESR1 JASPAR yes 101117717
chr6 32555954 32555958 LFA1 TRANSFAC yes 70347197
chr6 32555954 32555958 LFA1 TRANSFAC yes 101117718
chr6 32555973 32555977 TEAD2 TRANSFAC yes 70347198
chr6 32555973 32555977 TEAD2 TRANSFAC yes 101117719
chr6 32555974 32555982 OTX2 JASPAR yes 70347199
chr6 32555974 32555982 OTX2 JASPAR yes 101117720
chr6 32556041 32556045 LFA1 TRANSFAC yes 70347200
chr6 32556041 32556045 LFA1 TRANSFAC yes 101117721
chr6 32556044 32556056 YY1 JASPAR yes 70347201
chr6 32556044 32556056 YY1 JASPAR yes 101117722
chr6 32556071 32556082 NFIL3 JASPAR yes 70347202
chr6 32556071 32556082 NFIL3 JASPAR yes 101117723
chr6 32556088 32556098 SP1 JASPAR yes 70347203
chr6 32556088 32556098 SP1 JASPAR yes 101117724
chr6 32556131 32556138 CEBPA TRANSFAC yes 70347204
chr6 32556131 32556138 CEBPA TRANSFAC yes 101117725
chr6 32556132 32556143 E2F6 JASPAR yes 70347205
chr6 32556132 32556143 E2F6 JASPAR yes 101117726
chr6 32556153 32556162 NKX3-2 JASPAR yes 70347206
chr6 32556153 32556162 NKX3-2 JASPAR yes 101117727
chr6 32556155 32556170 NR2C2 JASPAR yes 70347207
chr6 32556155 32556170 NR2C2 JASPAR yes 101117728
chr6 32556163 32556180 ESR1 JASPAR yes 70347208
chr6 32556163 32556180 ESR1 JASPAR yes 101117729
chr6 32556163 32556181 ESR2 JASPAR yes 70347209
chr6 32556163 32556181 ESR2 JASPAR yes 101117730
chr6 32556182 32556192 SREBF1 JASPAR yes 70347210
chr6 32556182 32556192 SREBF2 JASPAR yes 70347211
chr6 32556182 32556192 SREBF1 JASPAR yes 101117731
chr6 32556182 32556192 SREBF2 JASPAR yes 101117732
chr6 32556183 32556191 MGA JASPAR yes 70347212
chr6 32556183 32556191 MGA JASPAR yes 101117733
SNP sites on vista51595[chr6:32555783-32556185]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32555804 rs544544799 T C
IRF1 IRF7 IRF8 POLR2A PRDM1
8963919
chr6 32555805 rs9270180 A G
IRF1 IRF7 IRF8 POLR2A PRDM1
8963920
chr6 32555832 rs5000802 C T
POLR2A
8963921
chr6 32555833 rs9270182 A C,G
POLR2A
8963922
chr6 32555838 rs5000803 T G
POLR2A
8963923
chr6 32555855 rs66962766 CTTT C
POLR2A SPI1 ZNF263
8963924
chr6 32555858 rs28724166 T A,C
POLR2A SPI1 ZNF263
8963925
chr6 32555861 rs34139413 T G
POLR2A SPI1 ZNF263
8963926
chr6 32555892 rs34801804 A C,G
FOXP1 GATA2 GATA3 POLR2A STAT1
8963927
chr6 32555923 rs9270184 A C
FEV POLR2A SPIC STAT1
8963928
chr6 32555924 rs9270185 A C,T
FEV POLR2A SPIC STAT1
8963929
chr6 32555926 rs17203839 T C
HOXA10 HOXD13 POLR2A SPIC STAT1
8963930
chr6 32555935 rs9270186 A G
BATF HOXA10 HOXD13 JDP2 MEF2D POLR2A
8963931
chr6 32555944 rs35773267 C T
BATF POLR2A
8963932
chr6 32555946 rs563043597 C CT
BATF POLR2A
8963933
chr6 32555946 rs66851698 C CT
BATF POLR2A
8963934
chr6 32555962 rs112240819 G A,C,T
ESR1 POLR2A RFX5
8963935
chr6 32555965 rs9270187 T G
ESR1 POLR2A
8963936
chr6 32555987 rs17210202 T C
POLR2A
8963937
chr6 32555989 rs17203846 T A
POLR2A
8963938
chr6 32556002 rs6924922 G T
POLR2A
8963939
chr6 32556007 rs6904562 A T
POLR2A
8963940
chr6 32556019 rs150394154 G A
POLR2A
8963941
chr6 32556020 rs17203867 T A,C,G
POLR2A
8963942
chr6 32556027 rs542744272 G A
POLR2A
8963943
chr6 32556030 rs9270189 C T
POLR2A
8963944
chr6 32556064 rs9270190 G C,T
POLR2A
8963945
chr6 32556121 rs34756259 C T
POLR2A
8963946
chr6 32556124 rs34594152 T C
POLR2A
8963947
chr6 32556129 rs13211585 C G
POLR2A
8963948
chr6 32556130 rs17210258 C T
POLR2A
8963949
chr6 32556141 rs17210265 G A
E2F6 POLR2A
8963950
chr6 32556145 rs13211672 C T
POLR2A
8963951
chr6 32556146 rs13211570 A G
POLR2A
8963952
chr6 32556154 rs6919993 A G,T
NKX3-2 POLR2A
8963953
chr6 32556156 rs9270192 A G,T
NKX3-2 NR2C2 POLR2A
8963954
chr6 32556157 rs9270193 A G
NKX3-2 NR2C2 POLR2A
8963955
chr6 32556159 rs9270194 T A,C
NKX3-2 NR2C2 POLR2A
8963956
chr6 32556165 rs17210293 A T
ESR1 ESR2 NR2C2 POLR2A
8963957
Genes possibly regulated by vista51595[chr6:32555783-32556185]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32485120 32498064 - HLA-DRB5 ENSG00000198502.5 32498064 0.85 1.0 6443 42281
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 98560
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 60229
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 20025
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51595[chr6:32555783-32556185]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results