EnhancerDB
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  3. vista51597[chr6:32572305-32572687]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51597[chr6:32572305-32572687]
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Tissue distribution of vista51597
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Transcription factor that possibly regulate vista51597[chr6:32572305-32572687]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32571740 32572853 POLR2A UCSC Txn Factor no Conserved 108539660
chr6 32571740 32572853 POLR2A UCSC Txn Factor no Conserved 108539661
chr6 32572197 32572577 TBP UCSC Txn Factor no Conserved 108539662
chr6 32572225 32572589 RFX5 UCSC Txn Factor no Conserved 108539663
chr6 32572248 32572612 NFYB UCSC Txn Factor no Conserved 108539664
chr6 32572318 32572323 ETS2 TRANSFAC yes 70347248
chr6 32572318 32572323 ETS2 TRANSFAC yes 101118255
chr6 32572318 32572329 FLI1 JASPAR yes 70347249
chr6 32572318 32572329 FLI1 JASPAR yes 101118256
chr6 32572318 32572331 ELF3 JASPAR yes 70347250
chr6 32572318 32572331 ELF3 JASPAR yes 101118257
chr6 32572319 32572329 ELK1 JASPAR yes 70347251
chr6 32572319 32572329 ELK3 JASPAR yes 70347252
chr6 32572319 32572329 ERF JASPAR yes 70347253
chr6 32572319 32572329 ERG JASPAR yes 70347254
chr6 32572319 32572329 ETS1 JASPAR yes 70347255
chr6 32572319 32572329 ETV1 JASPAR yes 70347256
chr6 32572319 32572329 ETV3 JASPAR yes 70347257
chr6 32572319 32572329 ETV4 JASPAR yes 70347258
chr6 32572319 32572329 ETV5 JASPAR yes 70347259
chr6 32572319 32572329 FEV JASPAR yes 70347260
chr6 32572319 32572329 FLI1 JASPAR yes 70347261
chr6 32572319 32572329 ELK1 JASPAR yes 101118258
chr6 32572319 32572329 ELK3 JASPAR yes 101118259
chr6 32572319 32572329 ERF JASPAR yes 101118260
chr6 32572319 32572329 ERG JASPAR yes 101118261
chr6 32572319 32572329 ETS1 JASPAR yes 101118262
chr6 32572319 32572329 ETV1 JASPAR yes 101118263
chr6 32572319 32572329 ETV3 JASPAR yes 101118264
chr6 32572319 32572329 ETV4 JASPAR yes 101118265
chr6 32572319 32572329 ETV5 JASPAR yes 101118266
chr6 32572319 32572329 FEV JASPAR yes 101118267
chr6 32572319 32572329 FLI1 JASPAR yes 101118268
chr6 32572319 32572330 ELF5 JASPAR yes 70347262
chr6 32572319 32572330 ETV2 JASPAR yes 70347263
chr6 32572319 32572330 ELF5 JASPAR yes 101118269
chr6 32572319 32572330 ETV2 JASPAR yes 101118270
chr6 32572319 32572331 EHF JASPAR yes 70347264
chr6 32572319 32572331 ELF4 JASPAR yes 70347265
chr6 32572319 32572331 EHF JASPAR yes 101118271
chr6 32572319 32572331 ELF4 JASPAR yes 101118272
chr6 32572321 32572327 ETS1 JASPAR yes 70347266
chr6 32572321 32572327 SPI1 JASPAR yes 70347267
chr6 32572321 32572327 ETS1 JASPAR yes 101118273
chr6 32572321 32572327 SPI1 JASPAR yes 101118274
chr6 32572321 32572331 ELK1 JASPAR yes 70347268
chr6 32572321 32572331 ELK1 JASPAR yes 101118275
chr6 32572334 32572338 YY1 TRANSFAC yes 70347269
chr6 32572334 32572338 YY1 TRANSFAC yes 101118276
chr6 32572347 32572362 PRDM1 JASPAR yes 70347270
chr6 32572347 32572362 PRDM1 JASPAR yes 101118277
chr6 32572356 32572371 STAT1 JASPAR yes 70347271
chr6 32572356 32572371 STAT1 JASPAR yes 101118278
chr6 32572358 32572369 STAT1 JASPAR yes 70347272
chr6 32572358 32572369 STAT3 JASPAR yes 70347273
chr6 32572358 32572369 STAT1 JASPAR yes 101118279
chr6 32572358 32572369 STAT3 JASPAR yes 101118280
chr6 32572363 32572373 RELA JASPAR yes 70347274
chr6 32572363 32572373 RELA JASPAR yes 101118281
chr6 32572363 32572374 NFKB1 JASPAR yes 70347275
chr6 32572363 32572374 NFKB1 JASPAR yes 101118282
chr6 32572364 32572374 NFKB1 JASPAR yes 70347276
chr6 32572364 32572374 RELA JASPAR yes 70347277
chr6 32572364 32572374 REL JASPAR yes 70347278
chr6 32572364 32572374 NFKB1 JASPAR yes 101118283
chr6 32572364 32572374 RELA JASPAR yes 101118284
chr6 32572364 32572374 REL JASPAR yes 101118285
chr6 32572369 32572375 MZF1 JASPAR yes 70347279
chr6 32572369 32572375 MZF1 JASPAR yes 101118286
chr6 32572378 32572389 TBX20 JASPAR yes 70347280
chr6 32572378 32572389 TBX20 JASPAR yes 101118287
chr6 32572378 32572398 TBX19 JASPAR yes 70347281
chr6 32572378 32572398 TBX19 JASPAR yes 101118288
chr6 32572380 32572396 T JASPAR yes 70347282
chr6 32572380 32572396 T JASPAR yes 101118289
chr6 32572399 32572414 STAT1 JASPAR yes 70347283
chr6 32572399 32572414 STAT1 JASPAR yes 101118290
chr6 32572401 32572412 STAT1 JASPAR yes 70347284
chr6 32572401 32572412 STAT1 JASPAR yes 101118291
chr6 32572406 32572422 NFYA JASPAR yes 70347285
chr6 32572406 32572422 NFYA JASPAR yes 101118292
chr6 32572408 32572411 MYB TRANSFAC yes 70347286
chr6 32572408 32572411 MYB TRANSFAC yes 101118293
chr6 32572411 32572415 H1TF2 TRANSFAC yes 70347287
chr6 32572411 32572415 NFE TRANSFAC yes 70347288
chr6 32572411 32572415 SRF TRANSFAC yes 70347289
chr6 32572411 32572415 H1TF2 TRANSFAC yes 101118294
chr6 32572411 32572415 NFE TRANSFAC yes 101118295
chr6 32572411 32572415 SRF TRANSFAC yes 101118296
chr6 32572411 32572417 NFYC TRANSFAC yes 70347290
chr6 32572411 32572417 NFYC TRANSFAC yes 101118297
chr6 32572418 32572423 GATA2 JASPAR yes 70347291
chr6 32572418 32572423 GATA2 JASPAR yes 101118298
chr6 32572418 32572439 IRF1 JASPAR yes 70347292
chr6 32572418 32572439 IRF1 JASPAR yes 101118299
chr6 32572456 32572466 TFAP4 JASPAR yes 70347293
chr6 32572456 32572466 TFAP4 JASPAR yes 101118300
chr6 32572472 32572483 NFIL3 JASPAR yes 70347294
chr6 32572472 32572483 NFIL3 JASPAR yes 101118301
chr6 32572478 32572482 TEAD2 TRANSFAC yes 70347295
chr6 32572478 32572482 TEAD2 TRANSFAC yes 101118302
chr6 32572478 32572483 TBP TRANSFAC yes 70347296
chr6 32572478 32572483 TBP TRANSFAC yes 101118303
chr6 32572504 32572519 AR JASPAR yes 70347297
chr6 32572504 32572519 AR JASPAR yes 101118304
chr6 32572510 32572521 BATF JASPAR yes 70347298
chr6 32572510 32572521 BATF JASPAR yes 101118305
chr6 32572513 32572526 DUXA JASPAR yes 70347299
chr6 32572513 32572526 DUXA JASPAR yes 101118306
chr6 32572514 32572525 PHOX2A JASPAR yes 70347300
chr6 32572514 32572525 PROP1 JASPAR yes 70347301
chr6 32572514 32572525 PHOX2A JASPAR yes 101118307
chr6 32572514 32572525 PROP1 JASPAR yes 101118308
chr6 32572529 32572538 GATA1 TRANSFAC yes 70347302
chr6 32572529 32572538 GATA1 TRANSFAC yes 101118309
chr6 32572530 32572536 GATA1 TRANSFAC yes 70347303
chr6 32572530 32572536 GATA1 TRANSFAC yes 101118310
chr6 32572530 32572538 GATA5 JASPAR yes 70347304
chr6 32572530 32572538 GATA5 JASPAR yes 101118311
chr6 32572548 32572555 SPI1 JASPAR yes 70347305
chr6 32572548 32572555 SPI1 JASPAR yes 101118312
chr6 32572548 32572556 FEV JASPAR yes 70347306
chr6 32572548 32572556 FEV JASPAR yes 101118313
chr6 32572550 32572555 ETS2 TRANSFAC yes 70347307
chr6 32572550 32572555 ETS2 TRANSFAC yes 101118314
chr6 32572553 32572559 SOX10 JASPAR yes 70347308
chr6 32572553 32572559 SOX10 JASPAR yes 101118315
chr6 32572562 32572576 RORA JASPAR yes 70347309
chr6 32572562 32572576 RORA JASPAR yes 101118316
chr6 32572600 32572618 MAFF JASPAR yes 70347310
chr6 32572600 32572618 MAFF JASPAR yes 101118317
chr6 32572602 32572606 YY1 TRANSFAC yes 70347311
chr6 32572602 32572606 YY1 TRANSFAC yes 101118318
chr6 32572634 32572639 NFY TRANSFAC yes 70347312
chr6 32572634 32572639 NFY TRANSFAC yes 101118319
chr6 32572644 32572653 HIC2 JASPAR yes 70347313
chr6 32572644 32572653 HIC2 JASPAR yes 101118320
chr6 32572647 32572651 LFA1 TRANSFAC yes 70347314
chr6 32572647 32572651 LFA1 TRANSFAC yes 101118321
chr6 32572650 32572654 YY1 TRANSFAC yes 70347315
chr6 32572650 32572654 YY1 TRANSFAC yes 101118322
chr6 32572679 32572689 NFATC3 JASPAR yes 70347316
chr6 32572679 32572689 NFATC3 JASPAR yes 101118323
chr6 32572680 32572687 NFATC2 JASPAR yes 70347317
chr6 32572680 32572687 NFATC2 JASPAR yes 101118324
chr6 32572683 32572695 TEAD1 JASPAR yes 70347318
chr6 32572683 32572695 TEAD1 JASPAR yes 101118325
SNP sites on vista51597[chr6:32572305-32572687]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32572305 rs9270919 G T
NFYB POLR2A RFX5 TBP
8964333
chr6 32572311 rs586610 T C
NFYB POLR2A RFX5 TBP
8964334
chr6 32572322 rs9270920 C T
EHF ELF3 ELF4 ELF5 ELK1 ELK3 ERF ERG ETS1 ETS2 ETV1 ETV2 ETV3 ETV4 ETV5 FEV FLI1 NFYB POLR2A RFX5 SPI1 TBP
8964335
chr6 32572326 rs9270921 C T
EHF ELF3 ELF4 ELF5 ELK1 ELK3 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV5 FEV FLI1 NFYB POLR2A RFX5 SPI1 TBP
8964336
chr6 32572344 rs576394551 G GA
NFYB POLR2A RFX5 TBP
8964337
chr6 32572388 rs9270922 T C
NFYB POLR2A RFX5 T TBP TBX19 TBX20
8964338
chr6 32572405 rs9270923 C T
NFYB POLR2A RFX5 STAT1 TBP
8964339
chr6 32572408 rs9270924 G A
MYB NFYA NFYB POLR2A RFX5 STAT1 TBP
8964340
chr6 32572412 rs191590337 C T
H1TF2 NFE NFYA NFYB NFYC POLR2A RFX5 SRF STAT1 TBP
8964341
chr6 32572415 rs183930356 A G
H1TF2 NFE NFYA NFYB NFYC POLR2A RFX5 SRF TBP
8964342
chr6 32572433 rs9270925 A G
IRF1 NFYB POLR2A RFX5 TBP
8964343
chr6 32572435 rs9270926 C A
IRF1 NFYB POLR2A RFX5 TBP
8964344
chr6 32572451 rs9270927 A G
NFYB POLR2A RFX5 TBP
8964345
chr6 32572461 rs9270928 G A,T
NFYB POLR2A RFX5 TBP TFAP4
8964346
chr6 32572495 rs4520043 A C,G
NFYB POLR2A RFX5 TBP
8964347
chr6 32572499 rs587495 T C,G
NFYB POLR2A RFX5 TBP
8964348
chr6 32572547 rs9270931 A T
NFYB POLR2A RFX5 TBP
8964349
chr6 32572571 rs67141839 GGACAT G
NFYB POLR2A RFX5 RORA TBP
8964350
chr6 32572583 rs77102498 G A
NFYB POLR2A RFX5
8964351
chr6 32572659 rs9270933 C G
POLR2A
8964352
chr6 32572666 rs2858869 A G
POLR2A
8964353
chr6 32572681 rs144163673 T C
NFATC2 NFATC3 POLR2A
8964354
Genes possibly regulated by vista51597[chr6:32572305-32572687]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32485120 32498064 - HLA-DRB5 ENSG00000198502.5 32498064 0.85 1.0 6443 25759
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 85320
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 76731
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 36527
Expression level of Genes
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miRNAs possibly regulated by vista51597[chr6:32572305-32572687]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results