EnhancerDB
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  3. vista51598[chr6:32576157-32576293]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51598[chr6:32576157-32576293]
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Tissue distribution of vista51598
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Transcription factor that possibly regulate vista51598[chr6:32576157-32576293]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32575247 32576340 POLR2A UCSC Txn Factor no Conserved 108539665
chr6 32576192 32576622 CTCF UCSC Txn Factor no Conserved 108539666
chr6 32576161 32576174 HSF1 JASPAR yes 70347319
chr6 32576161 32576174 HSF2 JASPAR yes 70347320
chr6 32576161 32576174 HSF4 JASPAR yes 70347321
chr6 32576161 32576174 HSF1 JASPAR yes 101118956
chr6 32576161 32576174 HSF2 JASPAR yes 101118957
chr6 32576161 32576174 HSF4 JASPAR yes 101118958
chr6 32576169 32576181 PBX1 JASPAR yes 70347322
chr6 32576169 32576181 PBX1 JASPAR yes 101118959
chr6 32576173 32576187 PAX6 JASPAR yes 70347323
chr6 32576173 32576187 PAX6 JASPAR yes 101118960
chr6 32576178 32576192 POU4F1 JASPAR yes 70347324
chr6 32576178 32576192 POU4F1 JASPAR yes 101118961
chr6 32576178 32576194 POU4F2 JASPAR yes 70347325
chr6 32576178 32576194 POU4F3 JASPAR yes 70347326
chr6 32576178 32576194 POU4F2 JASPAR yes 101118962
chr6 32576178 32576194 POU4F3 JASPAR yes 101118963
chr6 32576199 32576205 JUN TRANSFAC yes 70347327
chr6 32576199 32576205 JUN TRANSFAC yes 101118964
chr6 32576206 32576211 GATA2 JASPAR yes 70347328
chr6 32576206 32576211 GATA2 JASPAR yes 101118965
chr6 32576209 32576223 SPI1 JASPAR yes 70347329
chr6 32576209 32576223 SPI1 JASPAR yes 101118966
chr6 32576220 32576240 TBX19 JASPAR yes 70347330
chr6 32576220 32576240 TBX19 JASPAR yes 101118967
chr6 32576233 32576244 NFKB1 JASPAR yes 70347331
chr6 32576233 32576244 NFKB1 JASPAR yes 101118968
chr6 32576234 32576244 NFKB1 JASPAR yes 70347332
chr6 32576234 32576244 RELA JASPAR yes 70347333
chr6 32576234 32576244 REL JASPAR yes 70347334
chr6 32576234 32576244 NFKB1 JASPAR yes 101118969
chr6 32576234 32576244 RELA JASPAR yes 101118970
chr6 32576234 32576244 REL JASPAR yes 101118971
chr6 32576243 32576247 NFE TRANSFAC yes 70347335
chr6 32576243 32576247 NFE TRANSFAC yes 101118972
chr6 32576254 32576269 FOXP1 JASPAR yes 70347336
chr6 32576254 32576269 FOXP1 JASPAR yes 101118973
SNP sites on vista51598[chr6:32576157-32576293]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32576165 rs9271086 T A
HSF1 HSF2 HSF4 POLR2A
8964615
chr6 32576170 rs9271087 C A
HSF1 HSF2 HSF4 PBX1 POLR2A
8964616
chr6 32576175 rs9271088 A C
PAX6 PBX1 POLR2A
8964617
chr6 32576177 rs9271089 T G
PAX6 PBX1 POLR2A
8964618
chr6 32576247 rs9271090 T C
CTCF NFE POLR2A
8964619
chr6 32576265 rs34811813 G T
CTCF FOXP1 POLR2A
8964620
chr6 32576275 rs9271091 G T
CTCF POLR2A
8964621
chr6 32576282 rs9281938 T TA
CTCF POLR2A
8964622
chr6 32576283 rs77632534 G A
CTCF POLR2A
8964623
Genes possibly regulated by vista51598[chr6:32576157-32576293]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32485120 32498064 - HLA-DRB5 ENSG00000198502.5 32498064 0.85 1.0 6443 21907
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 81468
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 80337
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 40133
Expression level of Genes
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miRNAs possibly regulated by vista51598[chr6:32576157-32576293]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results