EnhancerDB
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  3. vista516[chr1:16438237-16438733]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista516[chr1:16438237-16438733]
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Tissue distribution of vista516
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Transcription factor that possibly regulate vista516[chr1:16438237-16438733]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 16438240 16438244 NFE TRANSFAC yes 27025713
chr1 16438240 16438244 NFE TRANSFAC yes 118238385
chr1 16438248 16438263 LEF1 JASPAR yes 27025714
chr1 16438248 16438263 LEF1 JASPAR yes 118238386
chr1 16438252 16438270 RARA JASPAR yes 27025715
chr1 16438252 16438270 RARA JASPAR yes 118238387
chr1 16438258 16438273 PRDM1 JASPAR yes 27025716
chr1 16438258 16438273 PRDM1 JASPAR yes 118238388
chr1 16438259 16438280 ZNF263 JASPAR yes 27025717
chr1 16438259 16438280 ZNF263 JASPAR yes 118238389
chr1 16438260 16438281 ZNF263 JASPAR yes 27025718
chr1 16438260 16438281 ZNF263 JASPAR yes 118238390
chr1 16438261 16438272 E2F6 JASPAR yes 27025719
chr1 16438261 16438272 E2F6 JASPAR yes 118238391
chr1 16438309 16438315 NFE2 TRANSFAC yes 27025720
chr1 16438309 16438315 NFE2 TRANSFAC yes 118238392
chr1 16438323 16438336 SMAD2 JASPAR yes 27025721
chr1 16438323 16438336 SMAD2 JASPAR yes 118238393
chr1 16438327 16438331 NFE TRANSFAC yes 27025722
chr1 16438327 16438331 NFE TRANSFAC yes 118238394
chr1 16438327 16438340 SMAD2 JASPAR yes 27025723
chr1 16438327 16438340 SMAD2 JASPAR yes 118238395
chr1 16438378 16438387 THAP1 JASPAR yes 27025724
chr1 16438378 16438387 THAP1 JASPAR yes 118238396
chr1 16438382 16438397 JUND JASPAR yes 27025725
chr1 16438382 16438397 JUND JASPAR yes 118238397
chr1 16438383 16438396 JUN JASPAR yes 27025726
chr1 16438383 16438396 NR2F1 JASPAR yes 27025727
chr1 16438383 16438396 JUN JASPAR yes 118238398
chr1 16438383 16438396 NR2F1 JASPAR yes 118238399
chr1 16438384 16438398 ATF7 JASPAR yes 27025728
chr1 16438384 16438398 ATF7 JASPAR yes 118238400
chr1 16438385 16438397 JDP2 JASPAR yes 27025729
chr1 16438385 16438397 JDP2 JASPAR yes 118238401
chr1 16438385 16438400 JUND JASPAR yes 27025730
chr1 16438385 16438400 JUND JASPAR yes 118238402
chr1 16438386 16438399 JUN JASPAR yes 27025731
chr1 16438386 16438399 JUN JASPAR yes 118238403
chr1 16438387 16438395 CREB1 JASPAR yes 27025732
chr1 16438387 16438395 CREB1 JASPAR yes 118238404
chr1 16438387 16438397 RORA JASPAR yes 27025733
chr1 16438387 16438397 RORA JASPAR yes 118238405
chr1 16438396 16438402 MZF1 JASPAR yes 27025734
chr1 16438396 16438402 MZF1 JASPAR yes 118238406
chr1 16438400 16438410 MAX JASPAR yes 27025735
chr1 16438400 16438410 MAX JASPAR yes 118238407
chr1 16438401 16438411 CLOCK JASPAR yes 27025736
chr1 16438401 16438411 MAX JASPAR yes 27025737
chr1 16438401 16438411 MLX JASPAR yes 27025738
chr1 16438401 16438411 MNT JASPAR yes 27025739
chr1 16438401 16438411 CLOCK JASPAR yes 118238408
chr1 16438401 16438411 MAX JASPAR yes 118238409
chr1 16438401 16438411 MLX JASPAR yes 118238410
chr1 16438401 16438411 MNT JASPAR yes 118238411
chr1 16438402 16438409 USF1 JASPAR yes 27025740
chr1 16438402 16438409 USF1 JASPAR yes 118238412
chr1 16438402 16438412 MAX JASPAR yes 27025741
chr1 16438402 16438412 MAX JASPAR yes 118238413
chr1 16438403 16438408 MYC TRANSFAC yes 27025742
chr1 16438403 16438408 USF1 TRANSFAC yes 27025743
chr1 16438403 16438408 USF2 TRANSFAC yes 27025744
chr1 16438403 16438408 MYC TRANSFAC yes 118238414
chr1 16438403 16438408 USF1 TRANSFAC yes 118238415
chr1 16438403 16438408 USF2 TRANSFAC yes 118238416
chr1 16438409 16438429 RREB1 JASPAR yes 27025745
chr1 16438409 16438429 RREB1 JASPAR yes 118238417
chr1 16438411 16438431 RREB1 JASPAR yes 27025746
chr1 16438411 16438431 RREB1 JASPAR yes 118238418
chr1 16438413 16438433 RREB1 JASPAR yes 27025747
chr1 16438413 16438433 RREB1 JASPAR yes 118238419
chr1 16438415 16438435 RREB1 JASPAR yes 27025748
chr1 16438415 16438435 RREB1 JASPAR yes 118238420
chr1 16438433 16438437 NFE TRANSFAC yes 27025749
chr1 16438433 16438437 NFE TRANSFAC yes 118238421
chr1 16438440 16438460 RREB1 JASPAR yes 27025750
chr1 16438440 16438460 RREB1 JASPAR yes 118238422
chr1 16438442 16438453 FOXH1 JASPAR yes 27025751
chr1 16438442 16438453 FOXH1 JASPAR yes 118238423
chr1 16438445 16438465 RREB1 JASPAR yes 27025752
chr1 16438445 16438465 RREB1 JASPAR yes 118238424
chr1 16438446 16438452 ZNF354C JASPAR yes 27025753
chr1 16438446 16438452 ZNF354C JASPAR yes 118238425
chr1 16438470 16438476 SOX10 JASPAR yes 27025754
chr1 16438470 16438476 SOX10 JASPAR yes 118238426
chr1 16438472 16438490 ESR2 JASPAR yes 27025755
chr1 16438472 16438490 ESR2 JASPAR yes 118238427
chr1 16438473 16438488 ESR2 JASPAR yes 27025756
chr1 16438473 16438488 ESR2 JASPAR yes 118238428
chr1 16438493 16438506 POU2F2 JASPAR yes 27025757
chr1 16438493 16438506 POU2F2 JASPAR yes 118238429
chr1 16438493 16438507 POU1F1 JASPAR yes 27025758
chr1 16438493 16438507 POU1F1 JASPAR yes 118238430
chr1 16438494 16438506 POU3F1 JASPAR yes 27025759
chr1 16438494 16438506 POU3F2 JASPAR yes 27025760
chr1 16438494 16438506 POU3F1 JASPAR yes 118238431
chr1 16438494 16438506 POU3F2 JASPAR yes 118238432
chr1 16438496 16438505 POU3F4 JASPAR yes 27025761
chr1 16438496 16438505 POU3F4 JASPAR yes 118238433
chr1 16438497 16438505 FOXL1 JASPAR yes 27025762
chr1 16438497 16438505 FOXL1 JASPAR yes 118238434
chr1 16438503 16438513 NFATC3 JASPAR yes 27025763
chr1 16438503 16438513 NFATC3 JASPAR yes 118238435
chr1 16438505 16438513 FOXO3 JASPAR yes 27025764
chr1 16438505 16438513 FOXO3 JASPAR yes 118238436
chr1 16438508 16438514 HiNF-A TRANSFAC yes 27025765
chr1 16438508 16438514 HiNF-A TRANSFAC yes 118238437
chr1 16438521 16438532 NRF1 JASPAR yes 27025766
chr1 16438521 16438532 NRF1 JASPAR yes 118238438
chr1 16438528 16438533 SP1 TRANSFAC yes 27025767
chr1 16438528 16438533 SP1 TRANSFAC yes 118238439
chr1 16438562 16438581 REST JASPAR yes 27025768
chr1 16438562 16438581 REST JASPAR yes 118238440
chr1 16438579 16438583 H4TF2 TRANSFAC yes 27025769
chr1 16438579 16438583 H4TF2 TRANSFAC yes 118238441
chr1 16438602 16438616 CREB3 JASPAR yes 27025770
chr1 16438602 16438616 CREB3L1 JASPAR yes 27025771
chr1 16438602 16438616 CREB3 JASPAR yes 118238442
chr1 16438602 16438616 CREB3L1 JASPAR yes 118238443
chr1 16438603 16438617 XBP1 JASPAR yes 27025772
chr1 16438603 16438617 XBP1 JASPAR yes 118238444
chr1 16438605 16438610 ATF1 TRANSFAC yes 27025773
chr1 16438605 16438610 ATF1 TRANSFAC yes 118238445
chr1 16438613 16438623 SP1 JASPAR yes 27025774
chr1 16438613 16438623 SP1 JASPAR yes 118238446
chr1 16438655 16438670 RFX5 JASPAR yes 27025775
chr1 16438655 16438670 RFX5 JASPAR yes 118238447
chr1 16438658 16438662 H4TF2 TRANSFAC yes 27025776
chr1 16438658 16438662 H4TF2 TRANSFAC yes 118238448
chr1 16438683 16438697 ZIC1 JASPAR yes 27025777
chr1 16438683 16438697 ZIC1 JASPAR yes 118238449
chr1 16438710 16438716 ETS1 JASPAR yes 27025778
chr1 16438710 16438716 ETS1 JASPAR yes 118238450
SNP sites on vista516[chr1:16438237-16438733]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 16438297 rs566223143 G C no 110060
chr1 16438345 rs114568963 T C no 110061
chr1 16438406 rs557955084 C T
CLOCK MAX MLX MNT MYC USF1 USF2
110062
chr1 16438409 rs369671550 GCACACA G
CLOCK MAX MLX MNT RREB1 USF1
110063
chr1 16438409 rs531559148 G GCA
CLOCK MAX MLX MNT RREB1 USF1
110064
chr1 16438409 rs55834432 G GCA
CLOCK MAX MLX MNT RREB1 USF1
110065
chr1 16438409 rs560803435 GCACACA G
CLOCK MAX MLX MNT RREB1 USF1
110066
chr1 16438409 rs755677872 G GCA
CLOCK MAX MLX MNT RREB1 USF1
110067
chr1 16438630 rs188083976 C T no 110068
chr1 16438648 rs144042435 G A no 110069
Genes possibly regulated by vista516[chr1:16438237-16438733]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 16340523 16346089 - HSPB7 ENSG00000173641.13 16346089 0.98 0.91 221 7852
chr1 16345370 16360545 + CLCNKA ENSG00000186510.7 16345370 0.95 1.0 222 7133
chr1 16370272 16383803 + CLCNKB ENSG00000184908.13 16370272 0.99 1.0 223 32035
chr1 16384264 16400127 - FAM131C ENSG00000185519.8 16400127 0.9 1.0 224 61890
chr1 16450832 16482582 - EPHA2 ENSG00000142627.9 16482582 0.81 1.0 225 56151
Expression level of Genes
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miRNAs possibly regulated by vista516[chr1:16438237-16438733]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results