EnhancerDB
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  3. vista51602[chr6:32590770-32591146]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51602[chr6:32590770-32591146]
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Tissue distribution of vista51602
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Transcription factor that possibly regulate vista51602[chr6:32590770-32591146]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32590019 32591033 POLR2A UCSC Txn Factor no Conserved 108539677
chr6 32590209 32590810 CTCF UCSC Txn Factor no Conserved 108539678
chr6 32590394 32591164 RUNX3 UCSC Txn Factor no Conserved 108539679
chr6 32590420 32591152 NFIC UCSC Txn Factor no Conserved 108539680
chr6 32590749 32591164 ATF2 UCSC Txn Factor no Conserved 108539681
chr6 32590777 32591154 EP300 UCSC Txn Factor no Conserved 108539682
chr6 32590839 32591149 POU2F2 UCSC Txn Factor no Conserved 108539683
chr6 32590966 32591212 RFX5 UCSC Txn Factor no Conserved 108539684
chr6 32590777 32590787 HMBOX1 JASPAR yes 70347533
chr6 32590842 32590847 GATA2 JASPAR yes 70347534
chr6 32590852 32590856 NFE TRANSFAC yes 70347535
chr6 32590852 32590857 GATA1 TRANSFAC yes 70347536
chr6 32590852 32590858 GATA3 JASPAR yes 70347537
chr6 32590881 32590891 HMBOX1 JASPAR yes 70347538
chr6 32590883 32590886 MYB TRANSFAC yes 70347539
chr6 32590885 32590897 MEF2A JASPAR yes 70347540
chr6 32590885 32590897 MEF2B JASPAR yes 70347541
chr6 32590885 32590897 MEF2D JASPAR yes 70347542
chr6 32590886 32590896 MEF2A JASPAR yes 70347543
chr6 32590893 32590903 TBX21 JASPAR yes 70347544
chr6 32590893 32590904 TBX20 JASPAR yes 70347545
chr6 32590894 32590902 MGA JASPAR yes 70347546
chr6 32590894 32590902 TBX15 JASPAR yes 70347547
chr6 32590894 32590902 TBX1 JASPAR yes 70347548
chr6 32590894 32590902 TBX4 JASPAR yes 70347549
chr6 32590894 32590902 TBX5 JASPAR yes 70347550
chr6 32590902 32590917 STAT1 JASPAR yes 70347551
chr6 32590915 32590927 TAL1 JASPAR yes 70347552
chr6 32590916 32590934 NFYA JASPAR yes 70347553
chr6 32590917 32590927 MSC JASPAR yes 70347554
chr6 32590917 32590927 MYF6 JASPAR yes 70347555
chr6 32590928 32590932 ESR1 TRANSFAC yes 70347556
chr6 32590932 32590942 ERF JASPAR yes 70347557
chr6 32590932 32590942 ERG JASPAR yes 70347558
chr6 32590932 32590942 ETS1 JASPAR yes 70347559
chr6 32590932 32590943 FLI1 JASPAR yes 70347560
chr6 32590933 32590940 PEA3 TRANSFAC yes 70347561
chr6 32590945 32590954 POU3F4 JASPAR yes 70347562
chr6 32590945 32590954 POU5F1B JASPAR yes 70347563
chr6 32590952 32590967 RUNX2 JASPAR yes 70347564
chr6 32590956 32590966 RUNX3 JASPAR yes 70347565
chr6 32590957 32590966 RUNX2 JASPAR yes 70347566
chr6 32590969 32590974 ETS2 TRANSFAC yes 70347567
chr6 32590973 32590986 JUN JASPAR yes 70347568
chr6 32590974 32590987 ATF4 JASPAR yes 70347569
chr6 32590987 32591000 POU2F2 JASPAR yes 70347570
chr6 32590988 32591000 POU3F1 JASPAR yes 70347571
chr6 32590988 32591001 POU3F3 JASPAR yes 70347572
chr6 32590989 32591001 POU2F1 JASPAR yes 70347573
chr6 32590990 32590999 POU3F4 JASPAR yes 70347574
chr6 32590990 32590999 POU5F1B JASPAR yes 70347575
chr6 32590997 32591012 RUNX2 JASPAR yes 70347576
chr6 32590998 32591008 RUNX3 JASPAR yes 70347577
chr6 32590998 32591009 RUNX1 JASPAR yes 70347578
chr6 32591003 32591015 POU3F1 JASPAR yes 70347579
chr6 32591003 32591015 POU3F2 JASPAR yes 70347580
chr6 32591003 32591016 POU3F3 JASPAR yes 70347581
chr6 32591004 32591008 YY1 TRANSFAC yes 70347582
chr6 32591007 32591010 MYB TRANSFAC yes 70347583
chr6 32591027 32591043 SOX8 JASPAR yes 70347584
chr6 32591029 32591033 YY1 TRANSFAC yes 70347585
chr6 32591033 32591054 IRF1 JASPAR yes 70347586
chr6 32591035 32591050 PRDM1 JASPAR yes 70347587
chr6 32591041 32591056 FOXP1 JASPAR yes 70347588
chr6 32591045 32591053 GATA3 JASPAR yes 70347589
chr6 32591045 32591063 SRF JASPAR yes 70347590
chr6 32591067 32591085 MAFF JASPAR yes 70347591
chr6 32591068 32591083 MAFK JASPAR yes 70347592
chr6 32591072 32591083 NRL JASPAR yes 70347593
chr6 32591080 32591084 YY1 TRANSFAC yes 70347594
chr6 32591102 32591106 NFE TRANSFAC yes 70347595
chr6 32591102 32591109 MEIS1 JASPAR yes 70347596
chr6 32591109 32591129 TP53 JASPAR yes 70347597
chr6 32591129 32591141 INSM1 JASPAR yes 70347598
SNP sites on vista51602[chr6:32590770-32591146]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32590771 rs2097432 T C
ATF2 CTCF NFIC POLR2A RUNX3
8965060
chr6 32590774 rs9271582 T C
ATF2 CTCF NFIC POLR2A RUNX3
8965061
chr6 32590778 rs35236701 C T
ATF2 CTCF EP300 HMBOX1 NFIC POLR2A RUNX3
8965062
chr6 32590780 rs9271583 T C
ATF2 CTCF EP300 HMBOX1 NFIC POLR2A RUNX3
8965063
chr6 32590800 rs201446144 GT G
ATF2 CTCF EP300 NFIC POLR2A RUNX3
8965064
chr6 32590803 rs114282479 C A
ATF2 CTCF EP300 NFIC POLR2A RUNX3
8965065
chr6 32590833 rs2097431 A G,T
ATF2 EP300 NFIC POLR2A RUNX3
8965066
chr6 32590844 rs17533167 G C
ATF2 EP300 GATA2 NFIC POLR2A POU2F2 RUNX3
8965067
chr6 32590870 rs9271584 T A,C
ATF2 EP300 NFIC POLR2A POU2F2 RUNX3
8965068
chr6 32590879 rs9271585 C A
ATF2 EP300 NFIC POLR2A POU2F2 RUNX3
8965069
chr6 32590893 rs12526593 A G
ATF2 EP300 MEF2A MEF2B MEF2D NFIC POLR2A POU2F2 RUNX3 TBX20 TBX21
8965070
chr6 32590899 rs9271586 G T
ATF2 EP300 MGA NFIC POLR2A POU2F2 RUNX3 TBX1 TBX15 TBX20 TBX21 TBX4 TBX5
8965071
chr6 32590916 rs9271587 A G
ATF2 EP300 NFIC NFYA POLR2A POU2F2 RUNX3 STAT1 TAL1
8965072
chr6 32590925 rs3129763 G A
ATF2 EP300 MSC MYF6 NFIC NFYA POLR2A POU2F2 RUNX3 TAL1
8965073
chr6 32590953 rs9271588 T C
ATF2 EP300 NFIC POLR2A POU2F2 POU3F4 POU5F1B RUNX2 RUNX3
8965074
chr6 32590990 rs35399661 T C
ATF2 EP300 NFIC POLR2A POU2F1 POU2F2 POU3F1 POU3F3 POU3F4 POU5F1B RFX5 RUNX3
8965075
chr6 32591001 rs34136716 A G
ATF2 EP300 NFIC POLR2A POU2F1 POU2F2 POU3F3 RFX5 RUNX1 RUNX2 RUNX3
8965076
chr6 32591008 rs146492780 TA T
ATF2 EP300 MYB NFIC POLR2A POU2F2 POU3F1 POU3F2 POU3F3 RFX5 RUNX1 RUNX2 RUNX3 YY1
8965077
chr6 32591008 rs369294565 TA T
ATF2 EP300 MYB NFIC POLR2A POU2F2 POU3F1 POU3F2 POU3F3 RFX5 RUNX1 RUNX2 RUNX3 YY1
8965078
chr6 32591038 rs28383319 A G
ATF2 EP300 IRF1 NFIC POU2F2 PRDM1 RFX5 RUNX3 SOX8
8965079
chr6 32591058 rs17599077 A C
ATF2 EP300 NFIC POU2F2 RFX5 RUNX3 SRF
8965080
chr6 32591106 rs35014460 T C
ATF2 EP300 MEIS1 NFE NFIC POU2F2 RFX5 RUNX3
8965081
chr6 32591128 rs9271589 G A
ATF2 EP300 NFIC POU2F2 RFX5 RUNX3 TP53
8965082
chr6 32591129 rs35424967 G A
ATF2 EP300 INSM1 NFIC POU2F2 RFX5 RUNX3 TP53
8965083
chr6 32591138 rs9271590 G A,T
ATF2 EP300 INSM1 NFIC POU2F2 RFX5 RUNX3
8965084
chr6 32591141 rs9271591 G A
ATF2 EP300 INSM1 NFIC POU2F2 RFX5 RUNX3
8965085
Genes possibly regulated by vista51602[chr6:32590770-32591146]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32485120 32498064 - HLA-DRB5 ENSG00000198502.5 32498064 0.85 1.0 6443 7294
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 66855
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 95190
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 54986
Expression level of Genes
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miRNAs possibly regulated by vista51602[chr6:32590770-32591146]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results