EnhancerDB
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  3. vista51603[chr6:32591414-32591731]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51603[chr6:32591414-32591731]
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Tissue distribution of vista51603
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Transcription factor that possibly regulate vista51603[chr6:32591414-32591731]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32591439 32592033 POLR2A UCSC Txn Factor no Conserved 108539685
chr6 32591488 32591781 RUNX3 UCSC Txn Factor no Conserved 108539686
chr6 32591514 32591757 SPI1 UCSC Txn Factor no Conserved 108539687
chr6 32591414 32591425 NFIL3 JASPAR yes 70347599
chr6 32591420 32591424 TEAD2 TRANSFAC yes 70347600
chr6 32591420 32591425 TBP TRANSFAC yes 70347601
chr6 32591451 32591457 TCF4 TRANSFAC yes 70347602
chr6 32591451 32591463 FOXI1 JASPAR yes 70347603
chr6 32591477 32591480 MYB TRANSFAC yes 70347604
chr6 32591477 32591488 PROP1 JASPAR yes 70347605
chr6 32591486 32591489 MYB TRANSFAC yes 70347606
chr6 32591491 32591495 YY1 TRANSFAC yes 70347607
chr6 32591516 32591520 YY1 TRANSFAC yes 70347608
chr6 32591527 32591539 YY1 JASPAR yes 70347609
chr6 32591566 32591569 MYB TRANSFAC yes 70347610
chr6 32591566 32591583 RARA JASPAR yes 70347611
chr6 32591566 32591583 RXRA JASPAR yes 70347612
chr6 32591569 32591573 YY1 TRANSFAC yes 70347613
chr6 32591586 32591603 NR3C1 JASPAR yes 70347614
chr6 32591586 32591603 NR3C2 JASPAR yes 70347615
chr6 32591599 32591608 VENTX JASPAR yes 70347616
chr6 32591599 32591609 GSX2 JASPAR yes 70347617
chr6 32591599 32591614 MYBL2 JASPAR yes 70347618
chr6 32591600 32591608 BSX JASPAR yes 70347619
chr6 32591600 32591610 HOXB13 JASPAR yes 70347620
chr6 32591600 32591610 HOXD13 JASPAR yes 70347621
chr6 32591602 32591606 YY1 TRANSFAC yes 70347622
chr6 32591615 32591636 ZNF263 JASPAR yes 70347623
chr6 32591616 32591622 MZF1 JASPAR yes 70347624
chr6 32591618 32591639 ZNF263 JASPAR yes 70347625
chr6 32591624 32591645 ZNF263 JASPAR yes 70347626
chr6 32591625 32591636 ELK4 JASPAR yes 70347627
chr6 32591625 32591636 FLI1 JASPAR yes 70347628
chr6 32591625 32591638 ELF3 JASPAR yes 70347629
chr6 32591626 32591636 ETV6 JASPAR yes 70347630
chr6 32591626 32591637 ELF5 JASPAR yes 70347631
chr6 32591626 32591638 EHF JASPAR yes 70347632
chr6 32591626 32591639 ELF1 JASPAR yes 70347633
chr6 32591627 32591634 SPI1 JASPAR yes 70347634
chr6 32591627 32591635 EHF JASPAR yes 70347635
chr6 32591632 32591647 RFX5 JASPAR yes 70347636
chr6 32591640 32591649 RUNX2 JASPAR yes 70347637
chr6 32591640 32591650 RUNX3 JASPAR yes 70347638
chr6 32591640 32591651 RUNX1 JASPAR yes 70347639
chr6 32591667 32591680 POU2F2 JASPAR yes 70347640
chr6 32591697 32591709 PBX1 JASPAR yes 70347641
SNP sites on vista51603[chr6:32591414-32591731]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32591416 rs34694997 T C
NFIL3
8965090
chr6 32591422 rs34915133 A G
NFIL3 TBP TEAD2
8965091
chr6 32591424 rs36006606 A G
NFIL3 TBP TEAD2
8965092
chr6 32591428 rs3129765 A G no 8965093
chr6 32591429 rs202219366 C A no 8965094
chr6 32591430 rs9271604 A G no 8965095
chr6 32591432 rs34394532 G T no 8965096
chr6 32591448 rs9271605 G A
POLR2A
8965097
chr6 32591469 rs112396255 A G
POLR2A
8965098
chr6 32591476 rs3135003 C T
POLR2A
8965099
chr6 32591500 rs112953812 G A
POLR2A RUNX3
8965100
chr6 32591531 rs143365466 A AC
POLR2A RUNX3 SPI1 YY1
8965101
chr6 32591531 rs9281959 A AC
POLR2A RUNX3 SPI1 YY1
8965102
chr6 32591566 rs9271607 A G
MYB POLR2A RARA RUNX3 RXRA SPI1
8965103
chr6 32591567 rs73728618 T A
MYB POLR2A RARA RUNX3 RXRA SPI1
8965104
chr6 32591588 rs9271608 A G
NR3C1 NR3C2 POLR2A RUNX3 SPI1
8965105
chr6 32591597 rs9271609 T C
NR3C1 NR3C2 POLR2A RUNX3 SPI1
8965106
chr6 32591601 rs9271610 C T
BSX GSX2 HOXB13 HOXD13 MYBL2 NR3C1 NR3C2 POLR2A RUNX3 SPI1 VENTX
8965107
chr6 32591609 rs9271611 A G
GSX2 HOXB13 HOXD13 MYBL2 POLR2A RUNX3 SPI1
8965108
chr6 32591629 rs73728619 C T
EHF ELF1 ELF3 ELF5 ELK4 ETV6 FLI1 POLR2A RUNX3 SPI1 ZNF263
8965109
chr6 32591654 rs9271612 A G
POLR2A RUNX3 SPI1
8965110
chr6 32591664 rs35001273 G A
POLR2A RUNX3 SPI1
8965111
chr6 32591666 rs9271613 C T
POLR2A RUNX3 SPI1
8965112
chr6 32591681 rs547538693 A G
POLR2A RUNX3 SPI1
8965113
chr6 32591682 rs4959029 T C,G
POLR2A RUNX3 SPI1
8965114
chr6 32591686 rs9271615 A G
POLR2A RUNX3 SPI1
8965115
chr6 32591687 rs201769738 G A
POLR2A RUNX3 SPI1
8965116
chr6 32591689 rs66598674 GCA G
POLR2A RUNX3 SPI1
8965117
chr6 32591690 rs4959107 C T
POLR2A RUNX3 SPI1
8965118
chr6 32591695 rs556499677 T G
POLR2A RUNX3 SPI1
8965119
chr6 32591717 rs114076271 G A
POLR2A RUNX3 SPI1
8965120
Genes possibly regulated by vista51603[chr6:32591414-32591731]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32485120 32498064 - HLA-DRB5 ENSG00000198502.5 32498064 0.85 1.0 6443 6650
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 66211
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 95775
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 55571
Expression level of Genes
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miRNAs possibly regulated by vista51603[chr6:32591414-32591731]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results