EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr6	32604729	32608519	POLR2A	UCSC Txn Factor	no	Conserved	108539688
chr6	32608263	32608267	YY1	TRANSFAC	yes		70347642
chr6	32608267	32608274	SPIB	JASPAR	yes		70347643
chr6	32608274	32608284	TBX21	JASPAR	yes		70347644
chr6	32608274	32608285	TBX20	JASPAR	yes		70347645
chr6	32608274	32608285	TBX2	JASPAR	yes		70347646
chr6	32608274	32608287	EOMES	JASPAR	yes		70347647
chr6	32608275	32608283	MGA	JASPAR	yes		70347648
chr6	32608275	32608283	TBX15	JASPAR	yes		70347649
chr6	32608275	32608283	TBX1	JASPAR	yes		70347650
chr6	32608275	32608283	TBX4	JASPAR	yes		70347651
chr6	32608275	32608283	TBX5	JASPAR	yes		70347652
chr6	32608275	32608285	TBR1	JASPAR	yes		70347653
chr6	32608283	32608287	TEAD2	TRANSFAC	yes		70347654
chr6	32608283	32608301	MAFF	JASPAR	yes		70347655
chr6	32608288	32608299	BATF	JASPAR	yes		70347656
chr6	32608289	32608300	FOSL2	JASPAR	yes		70347657
chr6	32608290	32608301	FOSL1	JASPAR	yes		70347658
chr6	32608292	32608299	JUN	TRANSFAC	yes		70347659
chr6	32608292	32608303	BATF	JASPAR	yes		70347660
chr6	32608311	32608315	YY1	TRANSFAC	yes		70347661
chr6	32608328	32608343	FOXP1	JASPAR	yes		70347662
chr6	32608332	32608347	FOXP1	JASPAR	yes		70347663
chr6	32608333	32608348	FOXP1	JASPAR	yes		70347664
chr6	32608333	32608354	IRF1	JASPAR	yes		70347665
chr6	32608334	32608349	FOXP1	JASPAR	yes		70347666
chr6	32608335	32608350	FOXP1	JASPAR	yes		70347667
chr6	32608348	32608353	SP1	TRANSFAC	yes		70347668
chr6	32608349	32608359	ZNF740	JASPAR	yes		70347669
chr6	32608379	32608397	IRF2	JASPAR	yes		70347670
chr6	32608380	32608401	IRF1	JASPAR	yes		70347671
chr6	32608383	32608397	SPI1	JASPAR	yes		70347672
chr6	32608396	32608400	YY1	TRANSFAC	yes		70347673

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr6	32608269	rs41269955	G	A	POLR2A SPIB	8966112
chr6	32608276	rs73729513	A	G	EOMES MGA POLR2A TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5	8966113
chr6	32608279	rs28383409	T	G	EOMES MGA POLR2A TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5	8966114
chr6	32608282	rs146682150	G	GA	EOMES MGA POLR2A TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5	8966115
chr6	32608282	rs9282024	G	GA	EOMES MGA POLR2A TBR1 TBX1 TBX15 TBX2 TBX20 TBX21 TBX4 TBX5	8966116
chr6	32608289	rs28383410	G	A	BATF FOSL2 MAFF POLR2A	8966117
chr6	32608294	rs9272641	G	A	BATF FOSL1 FOSL2 JUN MAFF POLR2A	8966118
chr6	32608303	rs9272642	T	C	BATF POLR2A	8966119
chr6	32608304	rs9272643	G	A	POLR2A	8966120
chr6	32608308	rs28383411	T	C	POLR2A	8966121
chr6	32608322	rs9272644	T	C	POLR2A	8966122
chr6	32608331	rs9272645	C	G	FOXP1 POLR2A	8966123
chr6	32608334	rs531139227	GAAA	G	FOXP1 IRF1 POLR2A	8966124
chr6	32608334	rs774435918	GAAA	G	FOXP1 IRF1 POLR2A	8966125
chr6	32608350	rs36220784	G	A	FOXP1 IRF1 POLR2A SP1 ZNF740	8966126
chr6	32608357	rs140779686	G	GA	POLR2A ZNF740	8966127
chr6	32608357	rs9282025	G	GA	POLR2A ZNF740	8966128
chr6	32608392	rs148817405	C	CT	IRF1 IRF2 POLR2A SPI1	8966129
chr6	32608392	rs28383903	C	CT	IRF1 IRF2 POLR2A SPI1	8966130
chr6	32608392	rs397709393	C	CT	IRF1 IRF2 POLR2A SPI1	8966131
chr6	32608392	rs559049065	C	T	IRF1 IRF2 POLR2A SPI1	8966132
chr6	32608394	rs9272646	T	C	IRF1 IRF2 POLR2A SPI1	8966133

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id
chr6	32546546	32557625	-	HLA-DRB1	ENSG00000196126.6	32557625	0.86	0.94	6444	49366
chr6	32595956	32614839	+	HLA-DQA1	ENSG00000196735.7	32595956	0.92	1.0	6445	87697
chr6	32627244	32636160	-	HLA-DQB1	ENSG00000179344.12	32636160	0.86	0.97	6446	72242

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results