EnhancerDB
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  3. vista51605[chr6:32653438-32653801]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51605[chr6:32653438-32653801]
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Tissue distribution of vista51605
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Transcription factor that possibly regulate vista51605[chr6:32653438-32653801]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32653323 32653752 RELA UCSC Txn Factor no Conserved 108539689
chr6 32653336 32653744 EP300 UCSC Txn Factor no Conserved 108539690
chr6 32653336 32653746 RUNX3 UCSC Txn Factor no Conserved 108539691
chr6 32653343 32653724 NFIC UCSC Txn Factor no Conserved 108539692
chr6 32653505 32653923 RFX5 UCSC Txn Factor no Conserved 108539693
chr6 32653430 32653440 NFATC3 JASPAR yes 70347674
chr6 32653430 32653440 NFATC3 JASPAR yes 101123329
chr6 32653456 32653476 RREB1 JASPAR yes 70347675
chr6 32653456 32653476 RREB1 JASPAR yes 101123330
chr6 32653457 32653469 FOXI1 JASPAR yes 70347676
chr6 32653457 32653469 FOXI1 JASPAR yes 101123331
chr6 32653485 32653488 MYB TRANSFAC yes 70347677
chr6 32653485 32653488 MYB TRANSFAC yes 101123332
chr6 32653492 32653504 GLI2 JASPAR yes 70347678
chr6 32653492 32653504 GLI2 JASPAR yes 101123333
chr6 32653493 32653503 RUNX3 JASPAR yes 70347679
chr6 32653493 32653503 RUNX3 JASPAR yes 101123334
chr6 32653498 32653504 SOX10 JASPAR yes 70347680
chr6 32653498 32653504 SOX10 JASPAR yes 101123335
chr6 32653501 32653506 ETS2 TRANSFAC yes 70347681
chr6 32653501 32653506 ETS2 TRANSFAC yes 101123336
chr6 32653501 32653509 FEV JASPAR yes 70347682
chr6 32653501 32653509 FEV JASPAR yes 101123337
chr6 32653515 32653525 MAX JASPAR yes 70347683
chr6 32653515 32653525 MAX JASPAR yes 101123338
chr6 32653515 32653526 USF1 JASPAR yes 70347684
chr6 32653515 32653526 USF2 JASPAR yes 70347685
chr6 32653515 32653526 USF1 JASPAR yes 101123339
chr6 32653515 32653526 USF2 JASPAR yes 101123340
chr6 32653516 32653526 TFE3 JASPAR yes 70347686
chr6 32653516 32653526 TFEB JASPAR yes 70347687
chr6 32653516 32653526 TFEC JASPAR yes 70347688
chr6 32653516 32653526 TFE3 JASPAR yes 101123341
chr6 32653516 32653526 TFEB JASPAR yes 101123342
chr6 32653516 32653526 TFEC JASPAR yes 101123343
chr6 32653533 32653542 SNAI2 JASPAR yes 70347689
chr6 32653533 32653542 SNAI2 JASPAR yes 101123344
chr6 32653533 32653543 TCF3 JASPAR yes 70347690
chr6 32653533 32653543 TCF3 JASPAR yes 101123345
chr6 32653559 32653569 GABPA JASPAR yes 70347691
chr6 32653559 32653569 GABPA JASPAR yes 101123346
chr6 32653559 32653570 FLI1 JASPAR yes 70347692
chr6 32653559 32653570 FLI1 JASPAR yes 101123347
chr6 32653560 32653565 ETS2 TRANSFAC yes 70347693
chr6 32653560 32653565 ETS2 TRANSFAC yes 101123348
chr6 32653560 32653568 FEV JASPAR yes 70347694
chr6 32653560 32653568 FEV JASPAR yes 101123349
chr6 32653561 32653568 SPI1 JASPAR yes 70347695
chr6 32653561 32653568 SPI1 JASPAR yes 101123350
chr6 32653584 32653602 SRF JASPAR yes 70347696
chr6 32653584 32653602 SRF JASPAR yes 101123351
chr6 32653586 32653589 MYB TRANSFAC yes 70347697
chr6 32653586 32653589 MYB TRANSFAC yes 101123352
chr6 32653586 32653602 SRF JASPAR yes 70347698
chr6 32653586 32653602 SRF JASPAR yes 101123353
chr6 32653587 32653599 SRF JASPAR yes 70347699
chr6 32653587 32653599 SRF JASPAR yes 101123354
chr6 32653607 32653622 FOXP1 JASPAR yes 70347700
chr6 32653607 32653622 FOXP1 JASPAR yes 101123355
chr6 32653608 32653623 FOXP1 JASPAR yes 70347701
chr6 32653608 32653623 FOXP1 JASPAR yes 101123356
chr6 32653609 32653615 TBP TRANSFAC yes 70347702
chr6 32653609 32653615 TBP TRANSFAC yes 101123357
chr6 32653609 32653624 FOXP1 JASPAR yes 70347703
chr6 32653609 32653624 FOXP1 JASPAR yes 101123358
chr6 32653609 32653630 IRF1 JASPAR yes 70347704
chr6 32653609 32653630 IRF1 JASPAR yes 101123359
chr6 32653610 32653625 FOXP1 JASPAR yes 70347705
chr6 32653610 32653625 FOXP1 JASPAR yes 101123360
chr6 32653610 32653631 IRF1 JASPAR yes 70347706
chr6 32653610 32653631 IRF1 JASPAR yes 101123361
chr6 32653611 32653626 FOXP1 JASPAR yes 70347707
chr6 32653611 32653626 FOXP1 JASPAR yes 101123362
chr6 32653611 32653632 IRF1 JASPAR yes 70347708
chr6 32653611 32653632 IRF1 JASPAR yes 101123363
chr6 32653612 32653627 FOXP1 JASPAR yes 70347709
chr6 32653612 32653627 FOXP1 JASPAR yes 101123364
chr6 32653612 32653633 IRF1 JASPAR yes 70347710
chr6 32653612 32653633 IRF1 JASPAR yes 101123365
chr6 32653613 32653628 FOXP1 JASPAR yes 70347711
chr6 32653613 32653628 FOXP1 JASPAR yes 101123366
chr6 32653613 32653634 IRF1 JASPAR yes 70347712
chr6 32653613 32653634 IRF1 JASPAR yes 101123367
chr6 32653614 32653629 FOXP1 JASPAR yes 70347713
chr6 32653614 32653629 FOXP1 JASPAR yes 101123368
chr6 32653615 32653630 FOXP1 JASPAR yes 70347714
chr6 32653615 32653630 FOXP1 JASPAR yes 101123369
chr6 32653615 32653636 IRF1 JASPAR yes 70347715
chr6 32653615 32653636 IRF1 JASPAR yes 101123370
chr6 32653616 32653631 FOXP1 JASPAR yes 70347716
chr6 32653616 32653631 FOXP1 JASPAR yes 101123371
chr6 32653618 32653633 FOXP1 JASPAR yes 70347717
chr6 32653618 32653633 FOXP1 JASPAR yes 101123372
chr6 32653662 32653669 NKX3-1 JASPAR yes 70347718
chr6 32653662 32653669 NKX3-1 JASPAR yes 101123373
chr6 32653665 32653680 PRDM1 JASPAR yes 70347719
chr6 32653665 32653680 PRDM1 JASPAR yes 101123374
chr6 32653670 32653675 ETS2 TRANSFAC yes 70347720
chr6 32653670 32653675 ETS2 TRANSFAC yes 101123375
chr6 32653674 32653689 NFYB JASPAR yes 70347721
chr6 32653674 32653689 NFYB JASPAR yes 101123376
chr6 32653676 32653692 NFYA JASPAR yes 70347722
chr6 32653676 32653692 NFYA JASPAR yes 101123377
chr6 32653677 32653695 NFYA JASPAR yes 70347723
chr6 32653677 32653695 NFYA JASPAR yes 101123378
chr6 32653681 32653685 H1TF2 TRANSFAC yes 70347724
chr6 32653681 32653685 NFE TRANSFAC yes 70347725
chr6 32653681 32653685 SRF TRANSFAC yes 70347726
chr6 32653681 32653685 H1TF2 TRANSFAC yes 101123379
chr6 32653681 32653685 NFE TRANSFAC yes 101123380
chr6 32653681 32653685 SRF TRANSFAC yes 101123381
chr6 32653706 32653710 YY1 TRANSFAC yes 70347727
chr6 32653706 32653710 YY1 TRANSFAC yes 101123382
chr6 32653740 32653755 FOXP1 JASPAR yes 70347728
chr6 32653740 32653755 FOXP1 JASPAR yes 101123383
chr6 32653742 32653757 FOXP1 JASPAR yes 70347729
chr6 32653742 32653757 FOXP1 JASPAR yes 101123384
chr6 32653743 32653758 FOXP1 JASPAR yes 70347730
chr6 32653743 32653758 FOXP1 JASPAR yes 101123385
chr6 32653744 32653759 FOXP1 JASPAR yes 70347731
chr6 32653744 32653759 FOXP1 JASPAR yes 101123386
chr6 32653752 32653766 ONECUT3 JASPAR yes 70347732
chr6 32653752 32653766 ONECUT3 JASPAR yes 101123387
chr6 32653768 32653779 CDX2 JASPAR yes 70347733
chr6 32653768 32653779 CDX2 JASPAR yes 101123388
chr6 32653769 32653780 FOXH1 JASPAR yes 70347734
chr6 32653769 32653780 HOXA10 JASPAR yes 70347735
chr6 32653769 32653780 FOXH1 JASPAR yes 101123389
chr6 32653769 32653780 HOXA10 JASPAR yes 101123390
chr6 32653770 32653779 CDX1 JASPAR yes 70347736
chr6 32653770 32653779 CDX1 JASPAR yes 101123391
chr6 32653770 32653780 HOXA13 JASPAR yes 70347737
chr6 32653770 32653780 HOXB13 JASPAR yes 70347738
chr6 32653770 32653780 HOXD13 JASPAR yes 70347739
chr6 32653770 32653780 HOXA13 JASPAR yes 101123392
chr6 32653770 32653780 HOXB13 JASPAR yes 101123393
chr6 32653770 32653780 HOXD13 JASPAR yes 101123394
chr6 32653773 32653781 FOXG1 JASPAR yes 70347740
chr6 32653773 32653781 FOXG1 JASPAR yes 101123395
chr6 32653774 32653782 FOXL1 JASPAR yes 70347741
chr6 32653774 32653782 FOXL1 JASPAR yes 101123396
chr6 32653784 32653798 TCF7L2 JASPAR yes 70347742
chr6 32653784 32653798 TCF7L2 JASPAR yes 101123397
chr6 32653784 32653799 LEF1 JASPAR yes 70347743
chr6 32653784 32653799 LEF1 JASPAR yes 101123398
SNP sites on vista51605[chr6:32653438-32653801]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32653442 rs28746973 T A
EP300 NFIC RELA RUNX3
8968517
chr6 32653443 rs28746974 G A
EP300 NFIC RELA RUNX3
8968518
chr6 32653536 rs28746976 C A
EP300 NFIC RELA RFX5 RUNX3 SNAI2 TCF3
8968519
chr6 32653558 rs28746977 C T
EP300 NFIC RELA RFX5 RUNX3
8968520
chr6 32653598 rs12526612 G A
EP300 NFIC RELA RFX5 RUNX3 SRF
8968521
chr6 32653608 rs12528365 T C
EP300 FOXP1 NFIC RELA RFX5 RUNX3
8968522
chr6 32653643 rs12528368 T C
EP300 NFIC RELA RFX5 RUNX3
8968523
chr6 32653648 rs28746979 C A
EP300 NFIC RELA RFX5 RUNX3
8968524
chr6 32653650 rs142150439 T C
EP300 NFIC RELA RFX5 RUNX3
8968525
chr6 32653651 rs28746980 G A
EP300 NFIC RELA RFX5 RUNX3
8968526
chr6 32653668 rs113251386 A G
EP300 NFIC NKX3-1 PRDM1 RELA RFX5 RUNX3
8968527
chr6 32653676 rs9275168 T C
EP300 NFIC NFYA NFYB PRDM1 RELA RFX5 RUNX3
8968528
chr6 32653677 rs28746981 G T
EP300 NFIC NFYA NFYB PRDM1 RELA RFX5 RUNX3
8968529
chr6 32653703 rs28746982 G A
EP300 NFIC RELA RFX5 RUNX3
8968530
chr6 32653721 rs9275169 T A
EP300 NFIC RELA RFX5 RUNX3
8968531
chr6 32653726 rs9275170 G A
EP300 RELA RFX5 RUNX3
8968532
chr6 32653732 rs28371252 G A
EP300 RELA RFX5 RUNX3
8968533
chr6 32653760 rs28746983 C T
ONECUT3 RFX5
8968534
chr6 32653769 rs145960884 G C
CDX2 FOXH1 HOXA10 RFX5
8968535
chr6 32653792 rs34100078 A G
LEF1 RFX5 TCF7L2
8968536
Genes possibly regulated by vista51605[chr6:32653438-32653801]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 4187
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 42518
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 82722
chr6 32709119 32714992 + HLA-DQA2 ENSG00000237541.3 32709119 0.91 1.0 6447 44682
chr6 32723875 32731311 - HLA-DQB2 ENSG00000232629.4 32731311 0.9 1.0 6448 22490
Expression level of Genes
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miRNAs possibly regulated by vista51605[chr6:32653438-32653801]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results