EnhancerDB
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  3. vista51606[chr6:32657421-32657546]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51606[chr6:32657421-32657546]
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Tissue distribution of vista51606
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Transcription factor that possibly regulate vista51606[chr6:32657421-32657546]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32657283 32657758 RELA UCSC Txn Factor no Conserved 108539694
chr6 32657355 32657596 BATF UCSC Txn Factor no Conserved 108539695
chr6 32657362 32657618 RUNX3 UCSC Txn Factor no Conserved 108539696
chr6 32657395 32657644 TBP UCSC Txn Factor no Conserved 108539697
chr6 32657401 32657712 TAF1 UCSC Txn Factor no Conserved 108539698
chr6 32657403 32657672 PAX5 UCSC Txn Factor no Conserved 108539699
chr6 32657432 32657447 FOXP1 JASPAR yes 70347744
chr6 32657432 32657447 FOXP1 JASPAR yes 101124021
chr6 32657432 32657453 IRF1 JASPAR yes 70347745
chr6 32657432 32657453 IRF1 JASPAR yes 101124022
chr6 32657433 32657444 FOXP2 JASPAR yes 70347746
chr6 32657433 32657444 FOXP2 JASPAR yes 101124023
chr6 32657435 32657443 FOXO3 JASPAR yes 70347747
chr6 32657435 32657443 FOXO3 JASPAR yes 101124024
chr6 32657467 32657471 YY1 TRANSFAC yes 70347748
chr6 32657467 32657471 YY1 TRANSFAC yes 101124025
chr6 32657487 32657498 ETV2 JASPAR yes 70347749
chr6 32657487 32657498 ETV2 JASPAR yes 101124026
chr6 32657488 32657498 ERF JASPAR yes 70347750
chr6 32657488 32657498 ERG JASPAR yes 70347751
chr6 32657488 32657498 ETS1 JASPAR yes 70347752
chr6 32657488 32657498 FEV JASPAR yes 70347753
chr6 32657488 32657498 FLI1 JASPAR yes 70347754
chr6 32657488 32657498 ERF JASPAR yes 101124027
chr6 32657488 32657498 ERG JASPAR yes 101124028
chr6 32657488 32657498 ETS1 JASPAR yes 101124029
chr6 32657488 32657498 FEV JASPAR yes 101124030
chr6 32657488 32657498 FLI1 JASPAR yes 101124031
chr6 32657488 32657499 FLI1 JASPAR yes 70347755
chr6 32657488 32657499 FLI1 JASPAR yes 101124032
chr6 32657489 32657497 FEV JASPAR yes 70347756
chr6 32657489 32657497 FEV JASPAR yes 101124033
chr6 32657490 32657501 NFKB1 JASPAR yes 70347757
chr6 32657490 32657501 NFKB1 JASPAR yes 101124034
chr6 32657491 32657501 REL JASPAR yes 70347758
chr6 32657491 32657501 REL JASPAR yes 101124035
chr6 32657494 32657515 MAFG JASPAR yes 70347759
chr6 32657494 32657515 MAFG JASPAR yes 101124036
chr6 32657510 32657514 YY1 TRANSFAC yes 70347760
chr6 32657510 32657514 YY1 TRANSFAC yes 101124037
chr6 32657518 32657529 CEBPA JASPAR yes 70347761
chr6 32657518 32657529 CEBPA JASPAR yes 101124038
chr6 32657519 32657530 CEBPB JASPAR yes 70347762
chr6 32657519 32657530 CEBPB JASPAR yes 101124039
chr6 32657531 32657548 PAX1 JASPAR yes 70347763
chr6 32657531 32657548 PAX9 JASPAR yes 70347764
chr6 32657531 32657548 PAX1 JASPAR yes 101124040
chr6 32657531 32657548 PAX9 JASPAR yes 101124041
chr6 32657532 32657551 PAX5 JASPAR yes 70347765
chr6 32657532 32657551 PAX5 JASPAR yes 101124042
chr6 32657544 32657554 BHLHE22 JASPAR yes 70347766
chr6 32657544 32657554 NEUROD2 JASPAR yes 70347767
chr6 32657544 32657554 BHLHE22 JASPAR yes 101124043
chr6 32657544 32657554 NEUROD2 JASPAR yes 101124044
SNP sites on vista51606[chr6:32657421-32657546]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32657436 rs3129716 T C
BATF FOXO3 FOXP1 FOXP2 IRF1 PAX5 RELA RUNX3 TAF1 TBP
8968712
chr6 32657452 rs28371254 T C
BATF IRF1 PAX5 RELA RUNX3 TAF1 TBP
8968713
chr6 32657505 rs4538748 T C
BATF MAFG PAX5 RELA RUNX3 TAF1 TBP
8968714
chr6 32657510 rs112097452 C T
BATF MAFG PAX5 RELA RUNX3 TAF1 TBP YY1
8968715
chr6 32657543 rs4642516 G T
BATF PAX1 PAX5 PAX9 RELA RUNX3 TAF1 TBP
8968716
Genes possibly regulated by vista51606[chr6:32657421-32657546]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32546546 32557625 - HLA-DRB1 ENSG00000196126.6 32557625 0.86 0.94 6444 204
chr6 32595956 32614839 + HLA-DQA1 ENSG00000196735.7 32595956 0.92 1.0 6445 38535
chr6 32627244 32636160 - HLA-DQB1 ENSG00000179344.12 32636160 0.86 0.97 6446 78739
chr6 32709119 32714992 + HLA-DQA2 ENSG00000237541.3 32709119 0.91 1.0 6447 48427
chr6 32723875 32731311 - HLA-DQB2 ENSG00000232629.4 32731311 0.9 1.0 6448 26235
Expression level of Genes
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miRNAs possibly regulated by vista51606[chr6:32657421-32657546]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results