EnhancerDB
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  3. vista51620[chr6:32956037-32956271]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51620[chr6:32956037-32956271]
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Tissue distribution of vista51620
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Transcription factor that possibly regulate vista51620[chr6:32956037-32956271]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32956057 32956078 ZNF263 JASPAR yes 70348303
chr6 32956101 32956106 NFY TRANSFAC yes 70348304
chr6 32956106 32956112 PEA3 TRANSFAC yes 70348305
chr6 32956107 32956115 EHF JASPAR yes 70348306
chr6 32956124 32956139 ZIC3 JASPAR yes 70348307
chr6 32956124 32956139 ZIC4 JASPAR yes 70348308
chr6 32956125 32956139 GLIS2 JASPAR yes 70348309
chr6 32956125 32956139 ZIC1 JASPAR yes 70348310
chr6 32956143 32956156 ZBTB18 JASPAR yes 70348311
chr6 32956144 32956154 NEUROG2 JASPAR yes 70348312
chr6 32956149 32956153 NFE TRANSFAC yes 70348313
chr6 32956169 32956184 FOXP1 JASPAR yes 70348314
chr6 32956169 32956190 IRF1 JASPAR yes 70348315
chr6 32956172 32956183 FOXP2 JASPAR yes 70348316
chr6 32956172 32956186 IRF7 JASPAR yes 70348317
chr6 32956173 32956187 STAT1 JASPAR yes 70348318
chr6 32956173 32956188 STAT2 JASPAR yes 70348319
chr6 32956174 32956183 SRY JASPAR yes 70348320
chr6 32956174 32956186 IRF1 JASPAR yes 70348321
chr6 32956174 32956189 FOXP1 JASPAR yes 70348322
chr6 32956175 32956196 IRF1 JASPAR yes 70348323
chr6 32956177 32956192 IRF9 JASPAR yes 70348324
chr6 32956178 32956192 IRF7 JASPAR yes 70348325
chr6 32956178 32956192 IRF8 JASPAR yes 70348326
chr6 32956179 32956193 SPIC JASPAR yes 70348327
chr6 32956179 32956193 STAT1 JASPAR yes 70348328
chr6 32956200 32956207 SPIB JASPAR yes 70348329
chr6 32956211 32956232 IRF1 JASPAR yes 70348330
chr6 32956212 32956217 TFAP2A TRANSFAC yes 70348331
chr6 32956212 32956218 MZF1 JASPAR yes 70348332
chr6 32956214 32956228 IRF8 JASPAR yes 70348333
chr6 32956223 32956244 IRF1 JASPAR yes 70348334
chr6 32956227 32956242 PRDM1 JASPAR yes 70348335
chr6 32956227 32956242 STAT2 JASPAR yes 70348336
chr6 32956228 32956249 ZNF263 JASPAR yes 70348337
chr6 32956231 32956252 ZNF263 JASPAR yes 70348338
chr6 32956241 32956246 ETS2 TRANSFAC yes 70348339
chr6 32956242 32956256 STAT1 JASPAR yes 70348340
chr6 32956242 32956257 STAT2 JASPAR yes 70348341
chr6 32956245 32956265 PPARG JASPAR yes 70348342
chr6 32956246 32956261 IRF9 JASPAR yes 70348343
chr6 32956248 32956262 STAT1 JASPAR yes 70348344
SNP sites on vista51620[chr6:32956037-32956271]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32956043 rs72868710 T C no 8970457
chr6 32956049 rs575674266 G A no 8970458
Genes possibly regulated by vista51620[chr6:32956037-32956271]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32902406 32908847 - HLA-DMB ENSG00000242574.4 32908847 0.84 0.92 6455 52810
chr6 32905141 32920899 - XXbac-BPG181M17.5 ENSG00000248993.1 32920899 0.97 0.91 6456 64862
chr6 32916390 32936871 - HLA-DMA ENSG00000204257.10 32936871 0.86 0.94 6457 80834
chr6 32936437 32949282 + BRD2 ENSG00000204256.8 32936437 0.67 0.88 6458 80400
chr6 32971955 32977389 - HLA-DOA ENSG00000204252.8 32977389 0.86 0.94 6459 78882
chr6 33032346 33048552 - HLA-DPA1 ENSG00000231389.3 33048552 0.9 0.95 6460 7719
chr6 33043703 33054978 + HLA-DPB1 ENSG00000223865.6 33043703 0.81 0.98 6461 12568
Expression level of Genes
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miRNAs possibly regulated by vista51620[chr6:32956037-32956271]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results