EnhancerDB
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  3. vista51626[chr6:32997077-32997532]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51626[chr6:32997077-32997532]
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Tissue distribution of vista51626
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Transcription factor that possibly regulate vista51626[chr6:32997077-32997532]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 32995588 32998491 POLR2A UCSC Txn Factor no Conserved 108539718
chr6 32995588 32998491 POLR2A UCSC Txn Factor no Conserved 108539719
chr6 32997017 32997428 RELA UCSC Txn Factor no Conserved 108539721
chr6 32997110 32997307 BATF UCSC Txn Factor no Conserved 108539722
chr6 32997224 32997508 RFX5 UCSC Txn Factor no Conserved 108539723
chr6 32997254 32997509 NFYB UCSC Txn Factor no Conserved 108539724
chr6 32997065 32997081 POU4F2 JASPAR yes 70348688
chr6 32997065 32997081 POU4F2 JASPAR yes 101134889
chr6 32997068 32997078 HMBOX1 JASPAR yes 70348689
chr6 32997068 32997078 HMBOX1 JASPAR yes 101134890
chr6 32997077 32997083 GATA1 TRANSFAC yes 70348690
chr6 32997077 32997083 GATA1 TRANSFAC yes 101134892
chr6 32997096 32997102 ETS1 JASPAR yes 70348691
chr6 32997096 32997102 SPI1 JASPAR yes 70348692
chr6 32997096 32997102 ETS1 JASPAR yes 101134893
chr6 32997096 32997102 SPI1 JASPAR yes 101134894
chr6 32997108 32997118 POU6F2 JASPAR yes 70348693
chr6 32997108 32997118 POU6F2 JASPAR yes 101134895
chr6 32997112 32997116 YY1 TRANSFAC yes 70348694
chr6 32997112 32997116 YY1 TRANSFAC yes 101134896
chr6 32997112 32997128 RFX4 JASPAR yes 70348695
chr6 32997112 32997128 RFX4 JASPAR yes 101134897
chr6 32997158 32997171 SMAD2 JASPAR yes 70348696
chr6 32997158 32997171 SMAD2 JASPAR yes 101134898
chr6 32997170 32997179 NF-kappaB TRANSFAC yes 70348697
chr6 32997170 32997179 NF-kappaB TRANSFAC yes 101134899
chr6 32997170 32997180 NFKB1 JASPAR yes 70348698
chr6 32997170 32997180 RELA JASPAR yes 70348699
chr6 32997170 32997180 REL JASPAR yes 70348700
chr6 32997170 32997180 NFKB1 JASPAR yes 101134900
chr6 32997170 32997180 RELA JASPAR yes 101134901
chr6 32997170 32997180 REL JASPAR yes 101134902
chr6 32997170 32997181 NFKB1 JASPAR yes 70348701
chr6 32997170 32997181 NFKB1 JASPAR yes 101134903
chr6 32997172 32997189 BCL6B JASPAR yes 70348702
chr6 32997172 32997189 BCL6B JASPAR yes 101134904
chr6 32997212 32997230 ESR1 JASPAR yes 70348703
chr6 32997212 32997230 ESR1 JASPAR yes 101134905
chr6 32997219 32997225 MZF1 JASPAR yes 70348704
chr6 32997219 32997225 MZF1 JASPAR yes 101134906
chr6 32997220 32997230 SP1 JASPAR yes 70348705
chr6 32997220 32997230 SP1 JASPAR yes 101134907
chr6 32997239 32997259 PPARG JASPAR yes 70348706
chr6 32997239 32997259 PPARG JASPAR yes 101134908
chr6 32997244 32997259 LEF1 JASPAR yes 70348707
chr6 32997244 32997259 LEF1 JASPAR yes 101134909
chr6 32997245 32997259 TCF7L2 JASPAR yes 70348708
chr6 32997245 32997259 TCF7L2 JASPAR yes 101134910
chr6 32997256 32997277 ZNF263 JASPAR yes 70348709
chr6 32997256 32997277 ZNF263 JASPAR yes 101134911
chr6 32997259 32997279 PPARG JASPAR yes 70348710
chr6 32997259 32997279 PPARG JASPAR yes 101134912
chr6 32997264 32997271 SPIB JASPAR yes 70348711
chr6 32997264 32997271 SPIB JASPAR yes 101134913
chr6 32997265 32997286 ZNF263 JASPAR yes 70348712
chr6 32997265 32997286 ZNF263 JASPAR yes 101134914
chr6 32997375 32997386 NFE2L2 JASPAR yes 70348713
chr6 32997375 32997386 NFE2L2 JASPAR yes 101134915
chr6 32997387 32997401 RORA JASPAR yes 70348714
chr6 32997387 32997401 RORA JASPAR yes 101134916
chr6 32997396 32997406 HOXA13 JASPAR yes 70348715
chr6 32997396 32997406 HOXB13 JASPAR yes 70348716
chr6 32997396 32997406 HOXD13 JASPAR yes 70348717
chr6 32997396 32997406 HOXA13 JASPAR yes 101134917
chr6 32997396 32997406 HOXB13 JASPAR yes 101134918
chr6 32997396 32997406 HOXD13 JASPAR yes 101134919
chr6 32997396 32997407 HOXA10 JASPAR yes 70348718
chr6 32997396 32997407 HOXA10 JASPAR yes 101134920
chr6 32997397 32997406 CDX1 JASPAR yes 70348719
chr6 32997397 32997406 CDX1 JASPAR yes 101134921
chr6 32997397 32997408 CDX2 JASPAR yes 70348720
chr6 32997397 32997408 CDX2 JASPAR yes 101134922
chr6 32997404 32997409 GATA2 JASPAR yes 70348721
chr6 32997404 32997409 GATA2 JASPAR yes 101134923
chr6 32997412 32997418 HiNF-A TRANSFAC yes 70348722
chr6 32997412 32997418 HiNF-A TRANSFAC yes 101134924
chr6 32997427 32997442 STAT1 JASPAR yes 70348723
chr6 32997427 32997442 STAT1 JASPAR yes 101134925
chr6 32997428 32997439 STAT3 JASPAR yes 70348724
chr6 32997428 32997439 STAT3 JASPAR yes 101134926
chr6 32997444 32997458 TCF7L2 JASPAR yes 70348725
chr6 32997444 32997458 TCF7L2 JASPAR yes 101134927
chr6 32997449 32997467 TP73 JASPAR yes 70348726
chr6 32997449 32997467 TP73 JASPAR yes 101134928
chr6 32997490 32997494 YY1 TRANSFAC yes 70348727
chr6 32997490 32997494 YY1 TRANSFAC yes 101134929
chr6 32997492 32997503 E2F6 JASPAR yes 70348728
chr6 32997492 32997503 E2F6 JASPAR yes 101134930
chr6 32997494 32997510 ZNF143 JASPAR yes 70348729
chr6 32997494 32997510 ZNF143 JASPAR yes 101134931
chr6 32997494 32997515 ZNF263 JASPAR yes 70348730
chr6 32997494 32997515 ZNF263 JASPAR yes 101134932
chr6 32997502 32997512 MZF1 JASPAR yes 70348731
chr6 32997502 32997512 MZF1 JASPAR yes 101134933
chr6 32997505 32997511 SP1 TRANSFAC yes 70348732
chr6 32997505 32997511 SP1 TRANSFAC yes 101134934
chr6 32997505 32997515 SP1 JASPAR yes 70348733
chr6 32997505 32997515 SP1 JASPAR yes 101134935
chr6 32997506 32997527 ZNF263 JASPAR yes 70348734
chr6 32997506 32997527 ZNF263 JASPAR yes 101134936
chr6 32997524 32997543 REST JASPAR yes 70348735
chr6 32997524 32997543 REST JASPAR yes 101134937
chr6 32997525 32997543 TP53 JASPAR yes 70348736
chr6 32997525 32997543 TP73 JASPAR yes 70348737
chr6 32997525 32997543 TP53 JASPAR yes 101134938
chr6 32997525 32997543 TP73 JASPAR yes 101134939
chr6 32997526 32997546 TP53 JASPAR yes 70348738
chr6 32997526 32997546 TP53 JASPAR yes 101134940
chr6 32997527 32997542 TP53 JASPAR yes 70348739
chr6 32997527 32997542 TP53 JASPAR yes 101134941
SNP sites on vista51626[chr6:32997077-32997532]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 32997102 rs149264958 G A
ETS1 POLR2A RELA SPI1
8970681
chr6 32997210 rs114732508 T C
BATF POLR2A RELA
8970682
chr6 32997301 rs144512488 G A
BATF NFYB POLR2A RELA RFX5
8970683
chr6 32997399 rs148400013 T C
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13 NFYB POLR2A RELA RFX5 RORA
8970684
chr6 32997434 rs145076379 C G
NFYB POLR2A RFX5 STAT1 STAT3
8970685
chr6 32997471 rs188916975 A G
NFYB POLR2A RFX5
8970686
chr6 32997483 rs372360250 TC T
NFYB POLR2A RFX5
8970687
chr6 32997483 rs9280266 TC T
NFYB POLR2A RFX5
8970688
chr6 32997504 rs11464668 T TC
MZF1 NFYB POLR2A RFX5 ZNF143 ZNF263
8970689
chr6 32997504 rs369452322 T TC
MZF1 NFYB POLR2A RFX5 ZNF143 ZNF263
8970690
chr6 32997504 rs9282379 T TC
MZF1 NFYB POLR2A RFX5 ZNF143 ZNF263
8970691
Genes possibly regulated by vista51626[chr6:32997077-32997532]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32902406 32908847 - HLA-DMB ENSG00000242574.4 32908847 0.84 0.92 6455 11770
chr6 32905141 32920899 - XXbac-BPG181M17.5 ENSG00000248993.1 32920899 0.97 0.91 6456 23822
chr6 32916390 32936871 - HLA-DMA ENSG00000204257.10 32936871 0.86 0.94 6457 39794
chr6 32936437 32949282 + BRD2 ENSG00000204256.8 32936437 0.67 0.88 6458 39360
chr6 32971955 32977389 - HLA-DOA ENSG00000204252.8 32977389 0.86 0.94 6459 80312
chr6 33032346 33048552 - HLA-DPA1 ENSG00000231389.3 33048552 0.9 0.95 6460 48980
chr6 33043703 33054978 + HLA-DPB1 ENSG00000223865.6 33043703 0.81 0.98 6461 53829
Expression level of Genes
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miRNAs possibly regulated by vista51626[chr6:32997077-32997532]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results