EnhancerDB
  1. Home
  2. Enhancers
  3. vista51627[chr6:33017498-33017699]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51627[chr6:33017498-33017699]
Back to top
Tissue distribution of vista51627
Back to top
Transcription factor that possibly regulate vista51627[chr6:33017498-33017699]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 33017070 33017528 CTCF UCSC Txn Factor no Conserved 108539725
chr6 33017514 33017526 INSM1 JASPAR yes 70348740
chr6 33017520 33017534 IRF7 JASPAR yes 70348741
chr6 33017521 33017536 PRDM1 JASPAR yes 70348742
chr6 33017521 33017536 STAT2 JASPAR yes 70348743
chr6 33017521 33017539 IRF2 JASPAR yes 70348744
chr6 33017523 33017544 IRF1 JASPAR yes 70348745
chr6 33017529 33017550 IRF1 JASPAR yes 70348746
chr6 33017533 33017547 SPI1 JASPAR yes 70348747
chr6 33017533 33017548 STAT2 JASPAR yes 70348748
chr6 33017538 33017543 ETS2 TRANSFAC yes 70348749
chr6 33017550 33017564 JUN JASPAR yes 70348750
chr6 33017552 33017564 HNF1B JASPAR yes 70348751
chr6 33017553 33017564 JUNB JASPAR yes 70348752
chr6 33017554 33017565 FOSL1 JASPAR yes 70348753
chr6 33017554 33017565 JUND JASPAR yes 70348754
chr6 33017556 33017562 JUN TRANSFAC yes 70348755
chr6 33017559 33017573 SPIC JASPAR yes 70348756
chr6 33017578 33017595 BCL6B JASPAR yes 70348757
chr6 33017586 33017596 RELA JASPAR yes 70348758
chr6 33017586 33017596 REL JASPAR yes 70348759
chr6 33017586 33017597 NFKB1 JASPAR yes 70348760
chr6 33017587 33017597 RELA JASPAR yes 70348761
chr6 33017589 33017594 H4TF1 TRANSFAC yes 70348762
chr6 33017601 33017611 SP1 JASPAR yes 70348763
chr6 33017602 33017610 SP1 TRANSFAC yes 70348764
chr6 33017603 33017608 SP1 TRANSFAC yes 70348765
chr6 33017604 33017609 SP1 TRANSFAC yes 70348766
chr6 33017604 33017610 SP1 TRANSFAC yes 70348767
chr6 33017626 33017637 CEBPB JASPAR yes 70348768
chr6 33017626 33017639 ATF4 JASPAR yes 70348769
chr6 33017670 33017674 TEAD2 TRANSFAC yes 70348770
chr6 33017670 33017675 TBP TRANSFAC yes 70348771
chr6 33017670 33017676 TFIID TRANSFAC yes 70348772
chr6 33017679 33017684 MYB TRANSFAC yes 70348773
chr6 33017681 33017693 YY1 JASPAR yes 70348774
SNP sites on vista51627[chr6:33017498-33017699]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 33017502 rs3130177 G A
CTCF
8970762
chr6 33017528 rs150651897 T C
CTCF IRF1 IRF2 IRF7 PRDM1 STAT2
8970763
chr6 33017548 rs527502373 C T
IRF1 STAT2
8970764
chr6 33017564 rs34137960 TC T
FOSL1 HNF1B JUN JUNB JUND SPIC
8970765
chr6 33017602 rs117905160 C T
SP1
8970766
Genes possibly regulated by vista51627[chr6:33017498-33017699]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32905141 32920899 - XXbac-BPG181M17.5 ENSG00000248993.1 32920899 0.97 0.91 6456 3401
chr6 32916390 32936871 - HLA-DMA ENSG00000204257.10 32936871 0.86 0.94 6457 19373
chr6 32936437 32949282 + BRD2 ENSG00000204256.8 32936437 0.67 0.88 6458 18939
chr6 32971955 32977389 - HLA-DOA ENSG00000204252.8 32977389 0.86 0.94 6459 59891
chr6 33032346 33048552 - HLA-DPA1 ENSG00000231389.3 33048552 0.9 0.95 6460 69147
chr6 33043703 33054978 + HLA-DPB1 ENSG00000223865.6 33043703 0.81 0.98 6461 73996
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51627[chr6:33017498-33017699]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results