EnhancerDB
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  3. vista51629[chr6:33029858-33030076]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51629[chr6:33029858-33030076]
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Tissue distribution of vista51629
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Transcription factor that possibly regulate vista51629[chr6:33029858-33030076]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 33029772 33030053 SPI1 UCSC Txn Factor no Conserved 108539726
chr6 33029823 33030084 SRF UCSC Txn Factor no Conserved 108539727
chr6 33029859 33029863 NFE TRANSFAC yes 70348779
chr6 33029859 33029863 NFE TRANSFAC yes 101136410
chr6 33029864 33029879 SCRT1 JASPAR yes 70348780
chr6 33029864 33029879 SCRT1 JASPAR yes 101136411
chr6 33029880 33029895 FOXP1 JASPAR yes 70348781
chr6 33029880 33029895 FOXP1 JASPAR yes 101136412
chr6 33029881 33029892 FOXP2 JASPAR yes 70348782
chr6 33029881 33029892 FOXP2 JASPAR yes 101136413
chr6 33029882 33029890 FOXG1 JASPAR yes 70348783
chr6 33029882 33029890 FOXG1 JASPAR yes 101136414
chr6 33029887 33029902 FOXP1 JASPAR yes 70348784
chr6 33029887 33029902 FOXP1 JASPAR yes 101136415
chr6 33029889 33029904 MEF2C JASPAR yes 70348785
chr6 33029889 33029904 MEF2C JASPAR yes 101136416
chr6 33029890 33029898 GATA3 JASPAR yes 70348786
chr6 33029890 33029898 GATA3 JASPAR yes 101136417
chr6 33029890 33029911 IRF1 JASPAR yes 70348787
chr6 33029890 33029911 IRF1 JASPAR yes 101136418
chr6 33029894 33029908 SPI1 JASPAR yes 70348788
chr6 33029894 33029908 SPIC JASPAR yes 70348789
chr6 33029894 33029908 SPI1 JASPAR yes 101136419
chr6 33029894 33029908 SPIC JASPAR yes 101136420
chr6 33029894 33029909 STAT2 JASPAR yes 70348790
chr6 33029894 33029909 STAT2 JASPAR yes 101136421
chr6 33029895 33029908 ELF1 JASPAR yes 70348791
chr6 33029895 33029908 ELF1 JASPAR yes 101136422
chr6 33029896 33029908 EHF JASPAR yes 70348792
chr6 33029896 33029908 ELF1 JASPAR yes 70348793
chr6 33029896 33029908 ELF4 JASPAR yes 70348794
chr6 33029896 33029908 EHF JASPAR yes 101136423
chr6 33029896 33029908 ELF1 JASPAR yes 101136424
chr6 33029896 33029908 ELF4 JASPAR yes 101136425
chr6 33029896 33029909 ELF3 JASPAR yes 70348795
chr6 33029896 33029909 ELF3 JASPAR yes 101136426
chr6 33029897 33029908 ELF5 JASPAR yes 70348796
chr6 33029897 33029908 ETV2 JASPAR yes 70348797
chr6 33029897 33029908 SPDEF JASPAR yes 70348798
chr6 33029897 33029908 ELF5 JASPAR yes 101136427
chr6 33029897 33029908 ETV2 JASPAR yes 101136428
chr6 33029897 33029908 SPDEF JASPAR yes 101136429
chr6 33029898 33029908 ELK1 JASPAR yes 70348799
chr6 33029898 33029908 ELK3 JASPAR yes 70348800
chr6 33029898 33029908 ERF JASPAR yes 70348801
chr6 33029898 33029908 ERG JASPAR yes 70348802
chr6 33029898 33029908 ETS1 JASPAR yes 70348803
chr6 33029898 33029908 ETV1 JASPAR yes 70348804
chr6 33029898 33029908 ETV3 JASPAR yes 70348805
chr6 33029898 33029908 ETV4 JASPAR yes 70348806
chr6 33029898 33029908 ETV6 JASPAR yes 70348807
chr6 33029898 33029908 FEV JASPAR yes 70348808
chr6 33029898 33029908 FLI1 JASPAR yes 70348809
chr6 33029898 33029908 GABPA JASPAR yes 70348810
chr6 33029898 33029908 ELK1 JASPAR yes 101136430
chr6 33029898 33029908 ELK3 JASPAR yes 101136431
chr6 33029898 33029908 ERF JASPAR yes 101136432
chr6 33029898 33029908 ERG JASPAR yes 101136433
chr6 33029898 33029908 ETS1 JASPAR yes 101136434
chr6 33029898 33029908 ETV1 JASPAR yes 101136435
chr6 33029898 33029908 ETV3 JASPAR yes 101136436
chr6 33029898 33029908 ETV4 JASPAR yes 101136437
chr6 33029898 33029908 ETV6 JASPAR yes 101136438
chr6 33029898 33029908 FEV JASPAR yes 101136439
chr6 33029898 33029908 FLI1 JASPAR yes 101136440
chr6 33029898 33029908 GABPA JASPAR yes 101136441
chr6 33029898 33029909 ELK4 JASPAR yes 70348811
chr6 33029898 33029909 FLI1 JASPAR yes 70348812
chr6 33029898 33029909 ELK4 JASPAR yes 101136442
chr6 33029898 33029909 FLI1 JASPAR yes 101136443
chr6 33029899 33029907 EHF JASPAR yes 70348813
chr6 33029899 33029907 FEV JASPAR yes 70348814
chr6 33029899 33029907 EHF JASPAR yes 101136444
chr6 33029899 33029907 FEV JASPAR yes 101136445
chr6 33029900 33029907 SPI1 JASPAR yes 70348815
chr6 33029900 33029907 SPI1 JASPAR yes 101136446
chr6 33029900 33029914 STAT1 JASPAR yes 70348816
chr6 33029900 33029914 STAT1 JASPAR yes 101136447
chr6 33029900 33029915 STAT2 JASPAR yes 70348817
chr6 33029900 33029915 STAT2 JASPAR yes 101136448
chr6 33029922 33029926 H1TF2 TRANSFAC yes 70348818
chr6 33029922 33029926 NFE TRANSFAC yes 70348819
chr6 33029922 33029926 SRF TRANSFAC yes 70348820
chr6 33029922 33029926 H1TF2 TRANSFAC yes 101136449
chr6 33029922 33029926 NFE TRANSFAC yes 101136450
chr6 33029922 33029926 SRF TRANSFAC yes 101136451
chr6 33029924 33029935 HOXA10 JASPAR yes 70348821
chr6 33029924 33029935 HOXA10 JASPAR yes 101136452
chr6 33029925 33029934 CDX1 JASPAR yes 70348822
chr6 33029925 33029934 CDX1 JASPAR yes 101136453
chr6 33029925 33029936 CDX2 JASPAR yes 70348823
chr6 33029925 33029936 CDX2 JASPAR yes 101136454
chr6 33029937 33029952 FOXA1 JASPAR yes 70348824
chr6 33029937 33029952 FOXA1 JASPAR yes 101136455
chr6 33029941 33029952 FOXA1 JASPAR yes 70348825
chr6 33029941 33029952 FOXA1 JASPAR yes 101136456
chr6 33029942 33029960 SRF JASPAR yes 70348826
chr6 33029942 33029960 SRF JASPAR yes 101136457
chr6 33029944 33029960 SRF JASPAR yes 70348827
chr6 33029944 33029960 SRF JASPAR yes 101136458
chr6 33029944 33029962 SRF JASPAR yes 70348828
chr6 33029944 33029962 SRF JASPAR yes 101136459
chr6 33029945 33029957 SRF JASPAR yes 70348829
chr6 33029945 33029957 SRF JASPAR yes 101136460
chr6 33029947 33029956 SRF TRANSFAC yes 70348830
chr6 33029947 33029956 SRF TRANSFAC yes 101136461
chr6 33029947 33029959 SRF JASPAR yes 70348831
chr6 33029947 33029959 SRF JASPAR yes 101136462
chr6 33029955 33029959 LFA1 TRANSFAC yes 70348832
chr6 33029955 33029959 LFA1 TRANSFAC yes 101136463
chr6 33029959 33029969 SREBF1 JASPAR yes 70348833
chr6 33029959 33029969 SREBF2 JASPAR yes 70348834
chr6 33029959 33029969 SREBF1 JASPAR yes 101136464
chr6 33029959 33029969 SREBF2 JASPAR yes 101136465
chr6 33029966 33029977 NFE2 JASPAR yes 70348835
chr6 33029966 33029977 NFE2 JASPAR yes 101136466
chr6 33029971 33029984 POU2F2 JASPAR yes 70348836
chr6 33029971 33029984 POU2F2 JASPAR yes 101136467
chr6 33029973 33029977 YY1 TRANSFAC yes 70348837
chr6 33029973 33029977 YY1 TRANSFAC yes 101136468
chr6 33029979 33029991 SRF JASPAR yes 70348838
chr6 33029979 33029991 SRF JASPAR yes 101136469
chr6 33030003 33030013 NFIA JASPAR yes 70348839
chr6 33030003 33030013 NFIA JASPAR yes 101136470
chr6 33030005 33030011 NFIC JASPAR yes 70348840
chr6 33030005 33030011 NFIC JASPAR yes 101136471
chr6 33030009 33030027 NFYA JASPAR yes 70348841
chr6 33030009 33030027 NFYA JASPAR yes 101136472
chr6 33030012 33030028 NFYA JASPAR yes 70348842
chr6 33030012 33030028 NFYA JASPAR yes 101136473
chr6 33030015 33030030 NFYB JASPAR yes 70348843
chr6 33030015 33030030 NFYB JASPAR yes 101136474
chr6 33030017 33030022 NFY TRANSFAC yes 70348844
chr6 33030017 33030022 NFY TRANSFAC yes 101136475
chr6 33030024 33030042 MAFF JASPAR yes 70348845
chr6 33030024 33030042 MAFF JASPAR yes 101136476
chr6 33030025 33030040 MAFK JASPAR yes 70348846
chr6 33030025 33030040 MAFK JASPAR yes 101136477
chr6 33030035 33030039 YY1 TRANSFAC yes 70348847
chr6 33030035 33030039 YY1 TRANSFAC yes 101136478
chr6 33030035 33030046 HOXA10 JASPAR yes 70348848
chr6 33030035 33030046 HOXA10 JASPAR yes 101136479
chr6 33030036 33030045 CDX1 JASPAR yes 70348849
chr6 33030036 33030045 CDX1 JASPAR yes 101136480
chr6 33030039 33030052 ATF4 JASPAR yes 70348850
chr6 33030039 33030052 ATF4 JASPAR yes 101136481
chr6 33030066 33030081 FOXA1 JASPAR yes 70348851
chr6 33030066 33030081 FOXA1 JASPAR yes 101136482
chr6 33030068 33030080 FOXC2 JASPAR yes 70348852
chr6 33030068 33030080 FOXC2 JASPAR yes 101136483
chr6 33030068 33030082 POU1F1 JASPAR yes 70348853
chr6 33030068 33030082 POU1F1 JASPAR yes 101136484
chr6 33030069 33030080 FOXB1 JASPAR yes 70348854
chr6 33030069 33030080 FOXC1 JASPAR yes 70348855
chr6 33030069 33030080 FOXB1 JASPAR yes 101136485
chr6 33030069 33030080 FOXC1 JASPAR yes 101136486
chr6 33030069 33030081 POU3F1 JASPAR yes 70348856
chr6 33030069 33030081 POU3F2 JASPAR yes 70348857
chr6 33030069 33030081 POU3F1 JASPAR yes 101136487
chr6 33030069 33030081 POU3F2 JASPAR yes 101136488
chr6 33030070 33030081 FOXA1 JASPAR yes 70348858
chr6 33030070 33030081 FOXA1 JASPAR yes 101136489
chr6 33030070 33030082 POU2F1 JASPAR yes 70348859
chr6 33030070 33030082 POU2F1 JASPAR yes 101136490
chr6 33030071 33030080 POU3F4 JASPAR yes 70348860
chr6 33030071 33030080 POU5F1B JASPAR yes 70348861
chr6 33030071 33030080 POU3F4 JASPAR yes 101136491
chr6 33030071 33030080 POU5F1B JASPAR yes 101136492
SNP sites on vista51629[chr6:33029858-33030076]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 33029879 rs118099378 G A
SCRT1 SPI1 SRF
8970965
chr6 33029925 rs116108798 A G
CDX1 CDX2 H1TF2 HOXA10 NFE SPI1 SRF
8970966
chr6 33029926 rs114620642 A G
CDX1 CDX2 H1TF2 HOXA10 NFE SPI1 SRF
8970967
chr6 33029930 rs80087810 A G
CDX1 CDX2 HOXA10 SPI1 SRF
8970968
chr6 33029937 rs55763051 C T
FOXA1 SPI1 SRF
8970969
chr6 33029962 rs149479188 G A
SPI1 SREBF1 SREBF2 SRF
8970970
chr6 33029964 rs6927519 C T
SPI1 SREBF1 SREBF2 SRF
8970971
chr6 33030012 rs143972420 G A
NFIA NFYA SPI1 SRF
8970972
chr6 33030044 rs148611767 A G
ATF4 CDX1 HOXA10 SPI1 SRF
8970973
chr6 33030076 rs79541122 G C
FOXA1 FOXB1 FOXC1 FOXC2 POU1F1 POU2F1 POU3F1 POU3F2 POU3F4 POU5F1B SRF
8970974
Genes possibly regulated by vista51629[chr6:33029858-33030076]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 32916390 32936871 - HLA-DMA ENSG00000204257.10 32936871 0.86 0.94 6457 7013
chr6 32936437 32949282 + BRD2 ENSG00000204256.8 32936437 0.67 0.88 6458 6579
chr6 32971955 32977389 - HLA-DOA ENSG00000204252.8 32977389 0.86 0.94 6459 47531
chr6 33032346 33048552 - HLA-DPA1 ENSG00000231389.3 33048552 0.9 0.95 6460 81524
chr6 33043703 33054978 + HLA-DPB1 ENSG00000223865.6 33043703 0.81 0.98 6461 86373
Expression level of Genes
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miRNAs possibly regulated by vista51629[chr6:33029858-33030076]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results