EnhancerDB
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  3. vista51643[chr6:33538378-33538887]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51643[chr6:33538378-33538887]
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Tissue distribution of vista51643
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Transcription factor that possibly regulate vista51643[chr6:33538378-33538887]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 33538495 33539574 POLR2A UCSC Txn Factor no Conserved 108539743
chr6 33538495 33539574 POLR2A UCSC Txn Factor no Conserved 108539744
chr6 33538523 33539107 NFIC UCSC Txn Factor no Conserved 108539745
chr6 33538523 33539107 NFIC UCSC Txn Factor no Conserved 108539746
chr6 33538532 33538949 EP300 UCSC Txn Factor no Conserved 108539747
chr6 33538532 33538949 EP300 UCSC Txn Factor no Conserved 108539748
chr6 33538555 33538977 ATF2 UCSC Txn Factor no Conserved 108539749
chr6 33538555 33538977 ATF2 UCSC Txn Factor no Conserved 108539750
chr6 33538558 33539235 RUNX3 UCSC Txn Factor no Conserved 108539751
chr6 33538558 33539235 RUNX3 UCSC Txn Factor no Conserved 108539752
chr6 33538559 33538829 TCF12 UCSC Txn Factor no Conserved 108539753
chr6 33538566 33538846 TCF3 UCSC Txn Factor no Conserved 108539754
chr6 33538566 33538898 BATF UCSC Txn Factor no Conserved 108539755
chr6 33538595 33539068 IRF4 UCSC Txn Factor no Conserved 108539756
chr6 33538595 33539068 IRF4 UCSC Txn Factor no Conserved 108539757
chr6 33538734 33538958 SPI1 UCSC Txn Factor no Conserved 108539758
chr6 33538734 33538958 SPI1 UCSC Txn Factor no Conserved 108539759
chr6 33538862 33539328 MAX UCSC Txn Factor no Conserved 108539760
chr6 33538862 33539328 MAX UCSC Txn Factor no Conserved 108539761
chr6 33538378 33538390 FOXC2 JASPAR yes 70349424
chr6 33538379 33538390 FOXP2 JASPAR yes 70349425
chr6 33538380 33538395 STAT2 JASPAR yes 70349426
chr6 33538381 33538393 IRF1 JASPAR yes 70349427
chr6 33538381 33538396 FOXP1 JASPAR yes 70349428
chr6 33538381 33538402 IRF1 JASPAR yes 70349429
chr6 33538382 33538403 IRF1 JASPAR yes 70349430
chr6 33538383 33538403 RREB1 JASPAR yes 70349431
chr6 33538384 33538399 IRF9 JASPAR yes 70349432
chr6 33538386 33538398 IRF1 JASPAR yes 70349433
chr6 33538387 33538402 FOXP1 JASPAR yes 70349434
chr6 33538387 33538408 IRF1 JASPAR yes 70349435
chr6 33538388 33538409 IRF1 JASPAR yes 70349436
chr6 33538390 33538404 IRF7 JASPAR yes 70349437
chr6 33538409 33538415 ZNF354C JASPAR yes 70349438
chr6 33538411 33538416 GATA2 JASPAR yes 70349439
chr6 33538418 33538432 NR2F1 JASPAR yes 70349440
chr6 33538428 33538438 GSX2 JASPAR yes 70349441
chr6 33538437 33538449 POU2F1 JASPAR yes 70349442
chr6 33538437 33538450 POU3F3 JASPAR yes 70349443
chr6 33538438 33538450 POU3F1 JASPAR yes 70349444
chr6 33538438 33538450 POU3F2 JASPAR yes 70349445
chr6 33538438 33538451 POU2F2 JASPAR yes 70349446
chr6 33538439 33538448 POU5F1B JASPAR yes 70349447
chr6 33538449 33538453 YY1 TRANSFAC yes 70349448
chr6 33538459 33538479 ESR1 JASPAR yes 70349449
chr6 33538464 33538479 ESR2 JASPAR yes 70349450
chr6 33538470 33538488 ESR2 JASPAR yes 70349451
chr6 33538481 33538484 MYB TRANSFAC yes 70349452
chr6 33538514 33538519 ETS2 TRANSFAC yes 70349453
chr6 33538514 33538522 EHF JASPAR yes 70349454
chr6 33538532 33538538 TCF4 TRANSFAC yes 70349455
chr6 33538585 33538600 MEF2C JASPAR yes 70349456
chr6 33538586 33538601 MEF2A JASPAR yes 70349457
chr6 33538587 33538599 MEF2A JASPAR yes 70349458
chr6 33538589 33538603 FOXF2 JASPAR yes 70349459
chr6 33538589 33538603 ONECUT3 JASPAR yes 70349460
chr6 33538591 33538602 FOXC1 JASPAR yes 70349461
chr6 33538592 33538604 FOXI1 JASPAR yes 70349462
chr6 33538620 33538625 SP1 TRANSFAC yes 70349463
chr6 33538621 33538631 ZNF740 JASPAR yes 70349464
chr6 33538623 33538633 SP1 JASPAR yes 70349465
chr6 33538623 33538644 ZNF263 JASPAR yes 70349466
chr6 33538626 33538631 SP1 TRANSFAC yes 70349467
chr6 33538628 33538633 TFAP2A TRANSFAC yes 70349468
chr6 33538628 33538634 MZF1 JASPAR yes 70349469
chr6 33538655 33538660 ETS2 TRANSFAC yes 70349470
chr6 33538655 33538663 EHF JASPAR yes 70349471
chr6 33538660 33538666 SP1 TRANSFAC yes 70349472
chr6 33538661 33538666 SP1 TRANSFAC yes 70349473
chr6 33538662 33538667 SP1 TRANSFAC yes 70349474
chr6 33538669 33538684 IRF9 JASPAR yes 70349475
chr6 33538672 33538684 IRF1 JASPAR yes 70349476
chr6 33538698 33538706 MEIS2 JASPAR yes 70349477
chr6 33538698 33538706 MEIS3 JASPAR yes 70349478
chr6 33538700 33538710 ID4 JASPAR yes 70349479
chr6 33538721 33538740 REST JASPAR yes 70349480
chr6 33538733 33538739 NFE2 TRANSFAC yes 70349481
chr6 33538742 33538757 JUND JASPAR yes 70349482
chr6 33538744 33538758 ATF7 JASPAR yes 70349483
chr6 33538745 33538757 JDP2 JASPAR yes 70349484
chr6 33538745 33538760 JUND JASPAR yes 70349485
chr6 33538746 33538759 JUN JASPAR yes 70349486
chr6 33538747 33538754 JUN TRANSFAC yes 70349487
chr6 33538777 33538781 YY1 TRANSFAC yes 70349488
chr6 33538779 33538791 E2F8 JASPAR yes 70349489
chr6 33538791 33538806 RUNX2 JASPAR yes 70349490
chr6 33538827 33538833 HiNF-A TRANSFAC yes 70349491
chr6 33538833 33538854 IRF1 JASPAR yes 70349492
chr6 33538837 33538851 IRF7 JASPAR yes 70349493
chr6 33538838 33538856 IRF2 JASPAR yes 70349494
chr6 33538839 33538859 PPARG JASPAR yes 70349495
chr6 33538839 33538860 IRF1 JASPAR yes 70349496
chr6 33538841 33538856 STAT2 JASPAR yes 70349497
chr6 33538842 33538856 STAT1 JASPAR yes 70349498
chr6 33538858 33538873 RUNX2 JASPAR yes 70349499
chr6 33538859 33538875 ZNF143 JASPAR yes 70349500
SNP sites on vista51643[chr6:33538378-33538887]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 33538427 rs544937322 A C
NR2F1
8974228
chr6 33538494 rs79494112 T C no 8974229
chr6 33538534 rs115775530 T A
EP300 NFIC POLR2A TCF4
8974230
chr6 33538756 rs548396107 CAG C
ATF2 ATF7 BATF EP300 IRF4 JDP2 JUN JUND NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
8974231
chr6 33538814 rs28434140 C T
ATF2 BATF EP300 IRF4 NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
8974232
chr6 33538842 rs28371443 T C
ATF2 BATF EP300 IRF1 IRF2 IRF4 IRF7 NFIC POLR2A PPARG RUNX3 SPI1 STAT1 STAT2 TCF3
8974233
chr6 33538865 rs62407569 A G
ATF2 BATF EP300 IRF4 MAX NFIC POLR2A RUNX2 RUNX3 SPI1 ZNF143
8974234
Genes possibly regulated by vista51643[chr6:33538378-33538887]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 33540329 33548019 - BAK1 ENSG00000030110.8 33548019 0.75 0.99 6481 90868
chr6 33551515 33556803 + GGNBP1 ENSG00000204188.3 33551515 0.97 1.0 6482 87372
chr6 33588142 33664351 + ITPR3 ENSG00000096433.6 33588142 0.84 1.0 6483 50745
Expression level of Genes
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miRNAs possibly regulated by vista51643[chr6:33538378-33538887]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results