EnhancerDB
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  3. vista51644[chr6:33538911-33539356]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51644[chr6:33538911-33539356]
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Tissue distribution of vista51644
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Transcription factor that possibly regulate vista51644[chr6:33538911-33539356]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 33538495 33539574 POLR2A UCSC Txn Factor no Conserved 108539743
chr6 33538495 33539574 POLR2A UCSC Txn Factor no Conserved 108539744
chr6 33538523 33539107 NFIC UCSC Txn Factor no Conserved 108539745
chr6 33538523 33539107 NFIC UCSC Txn Factor no Conserved 108539746
chr6 33538532 33538949 EP300 UCSC Txn Factor no Conserved 108539747
chr6 33538532 33538949 EP300 UCSC Txn Factor no Conserved 108539748
chr6 33538555 33538977 ATF2 UCSC Txn Factor no Conserved 108539749
chr6 33538555 33538977 ATF2 UCSC Txn Factor no Conserved 108539750
chr6 33538558 33539235 RUNX3 UCSC Txn Factor no Conserved 108539751
chr6 33538558 33539235 RUNX3 UCSC Txn Factor no Conserved 108539752
chr6 33538595 33539068 IRF4 UCSC Txn Factor no Conserved 108539756
chr6 33538595 33539068 IRF4 UCSC Txn Factor no Conserved 108539757
chr6 33538734 33538958 SPI1 UCSC Txn Factor no Conserved 108539758
chr6 33538734 33538958 SPI1 UCSC Txn Factor no Conserved 108539759
chr6 33538862 33539328 MAX UCSC Txn Factor no Conserved 108539760
chr6 33538862 33539328 MAX UCSC Txn Factor no Conserved 108539761
chr6 33539006 33539394 YY1 UCSC Txn Factor no Conserved 108539762
chr6 33539013 33539416 THAP1 UCSC Txn Factor no Conserved 108539763
chr6 33539085 33539317 REST UCSC Txn Factor no Conserved 108539764
chr6 33539098 33539264 IRF1 UCSC Txn Factor no Conserved 108539765
chr6 33539112 33539328 EGR1 UCSC Txn Factor no Conserved 108539766
chr6 33538919 33538922 MYB TRANSFAC yes 70349501
chr6 33538924 33538943 CTCF JASPAR yes 70349502
chr6 33538945 33538950 GATA2 JASPAR yes 70349503
chr6 33538963 33538977 PLAG1 JASPAR yes 70349504
chr6 33538969 33538979 ZNF740 JASPAR yes 70349505
chr6 33538973 33538980 SP1 TRANSFAC yes 70349506
chr6 33538975 33538980 SP1 TRANSFAC yes 70349507
chr6 33539002 33539008 NFE2 TRANSFAC yes 70349508
chr6 33539016 33539026 ERF JASPAR yes 70349509
chr6 33539016 33539026 ERG JASPAR yes 70349510
chr6 33539016 33539026 ETS1 JASPAR yes 70349511
chr6 33539016 33539026 FEV JASPAR yes 70349512
chr6 33539016 33539026 FLI1 JASPAR yes 70349513
chr6 33539016 33539027 ETV2 JASPAR yes 70349514
chr6 33539018 33539024 ETS1 JASPAR yes 70349515
chr6 33539018 33539028 ELK1 JASPAR yes 70349516
chr6 33539054 33539069 RUNX2 JASPAR yes 70349517
chr6 33539055 33539058 MYB TRANSFAC yes 70349518
chr6 33539055 33539064 RUNX2 JASPAR yes 70349519
chr6 33539089 33539101 TAL1 JASPAR yes 70349520
chr6 33539119 33539133 TCF7L2 JASPAR yes 70349521
chr6 33539120 33539135 HNF4A JASPAR yes 70349522
chr6 33539123 33539129 TCF1 TRANSFAC yes 70349523
chr6 33539123 33539130 TCF4 TRANSFAC yes 70349524
chr6 33539128 33539143 TFAP2A JASPAR yes 70349525
chr6 33539128 33539143 TFAP2C JASPAR yes 70349526
chr6 33539150 33539163 TFAP2A JASPAR yes 70349527
chr6 33539150 33539163 TFAP2B JASPAR yes 70349528
chr6 33539150 33539163 TFAP2C JASPAR yes 70349529
chr6 33539161 33539167 SP1 TRANSFAC yes 70349530
chr6 33539161 33539171 SP1 JASPAR yes 70349531
chr6 33539163 33539168 SP1 TRANSFAC yes 70349532
chr6 33539169 33539174 ETS2 TRANSFAC yes 70349533
chr6 33539169 33539177 EHF JASPAR yes 70349534
chr6 33539175 33539179 LFA1 TRANSFAC yes 70349535
chr6 33539176 33539195 PAX5 JASPAR yes 70349536
chr6 33539199 33539211 YY1 JASPAR yes 70349537
chr6 33539202 33539208 YY1 JASPAR yes 70349538
chr6 33539215 33539226 NRF1 JASPAR yes 70349539
chr6 33539216 33539220 LFA1 TRANSFAC yes 70349540
chr6 33539222 33539227 SP1 TRANSFAC yes 70349541
chr6 33539226 33539241 NR2C2 JASPAR yes 70349542
chr6 33539233 33539236 MYB TRANSFAC yes 70349543
chr6 33539247 33539262 ZIC3 JASPAR yes 70349544
chr6 33539254 33539260 MAZ TRANSFAC yes 70349545
chr6 33539254 33539265 E2F6 JASPAR yes 70349546
chr6 33539291 33539306 ZBTB33 JASPAR yes 70349547
chr6 33539294 33539309 ZBTB33 JASPAR yes 70349548
SNP sites on vista51644[chr6:33538911-33539356]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 33539242 rs5745603 A G,T
EGR1 IRF1 MAX POLR2A REST THAP1 YY1
8974235
chr6 33539249 rs534047538 C G
EGR1 IRF1 MAX POLR2A REST THAP1 YY1 ZIC3
8974236
chr6 33539254 rs572556228 C T
E2F6 EGR1 IRF1 MAX MAZ POLR2A REST THAP1 YY1 ZIC3
8974237
chr6 33539327 rs5745602 C A
EGR1 MAX POLR2A THAP1 YY1
8974238
Genes possibly regulated by vista51644[chr6:33538911-33539356]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 33540329 33548019 - BAK1 ENSG00000030110.8 33548019 0.75 0.99 6481 91337
chr6 33551515 33556803 + GGNBP1 ENSG00000204188.3 33551515 0.97 1.0 6482 87841
chr6 33588142 33664351 + ITPR3 ENSG00000096433.6 33588142 0.84 1.0 6483 51214
Expression level of Genes
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miRNAs possibly regulated by vista51644[chr6:33538911-33539356]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results