EnhancerDB
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  3. vista51645[chr6:33546480-33546561]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51645[chr6:33546480-33546561]
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Tissue distribution of vista51645
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Transcription factor that possibly regulate vista51645[chr6:33546480-33546561]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 33546327 33546683 IRF1 UCSC Txn Factor no Conserved 108539767
chr6 33546355 33546591 RUNX3 UCSC Txn Factor no Conserved 108539768
chr6 33546469 33546483 ZIC1 JASPAR yes 70349549
chr6 33546469 33546483 ZIC1 JASPAR yes 101157025
chr6 33546469 33546484 ZIC3 JASPAR yes 70349550
chr6 33546469 33546484 ZIC3 JASPAR yes 101157026
chr6 33546513 33546523 MSC JASPAR yes 70349551
chr6 33546513 33546523 TFAP4 JASPAR yes 70349552
chr6 33546513 33546523 MSC JASPAR yes 101157027
chr6 33546513 33546523 TFAP4 JASPAR yes 101157028
chr6 33546513 33546524 NRL JASPAR yes 70349553
chr6 33546513 33546524 NRL JASPAR yes 101157029
chr6 33546515 33546536 IRF1 JASPAR yes 70349554
chr6 33546515 33546536 IRF1 JASPAR yes 101157030
chr6 33546517 33546532 PRDM1 JASPAR yes 70349555
chr6 33546517 33546532 STAT2 JASPAR yes 70349556
chr6 33546517 33546532 PRDM1 JASPAR yes 101157031
chr6 33546517 33546532 STAT2 JASPAR yes 101157032
chr6 33546518 33546532 STAT1 JASPAR yes 70349557
chr6 33546518 33546532 STAT1 JASPAR yes 101157033
chr6 33546519 33546531 IRF1 JASPAR yes 70349558
chr6 33546519 33546531 IRF1 JASPAR yes 101157034
chr6 33546519 33546533 IRF7 JASPAR yes 70349559
chr6 33546519 33546533 IRF8 JASPAR yes 70349560
chr6 33546519 33546533 IRF7 JASPAR yes 101157035
chr6 33546519 33546533 IRF8 JASPAR yes 101157036
chr6 33546519 33546534 IRF9 JASPAR yes 70349561
chr6 33546519 33546534 IRF9 JASPAR yes 101157037
chr6 33546520 33546538 IRF2 JASPAR yes 70349562
chr6 33546520 33546538 IRF2 JASPAR yes 101157038
chr6 33546521 33546542 IRF1 JASPAR yes 70349563
chr6 33546521 33546542 IRF1 JASPAR yes 101157039
chr6 33546523 33546538 STAT2 JASPAR yes 70349564
chr6 33546523 33546538 STAT2 JASPAR yes 101157040
chr6 33546524 33546538 STAT1 JASPAR yes 70349565
chr6 33546524 33546538 STAT1 JASPAR yes 101157041
chr6 33546525 33546537 IRF1 JASPAR yes 70349566
chr6 33546525 33546537 IRF1 JASPAR yes 101157042
chr6 33546525 33546539 IRF7 JASPAR yes 70349567
chr6 33546525 33546539 IRF7 JASPAR yes 101157043
chr6 33546525 33546540 IRF9 JASPAR yes 70349568
chr6 33546525 33546540 IRF9 JASPAR yes 101157044
chr6 33546539 33546545 SP1 TRANSFAC yes 70349569
chr6 33546539 33546545 SP1 TRANSFAC yes 101157045
chr6 33546539 33546549 SP1 JASPAR yes 70349570
chr6 33546539 33546549 SP1 JASPAR yes 101157046
chr6 33546541 33546555 PLAG1 JASPAR yes 70349571
chr6 33546541 33546555 PLAG1 JASPAR yes 101157047
chr6 33546554 33546558 YY1 TRANSFAC yes 70349572
chr6 33546554 33546558 YY1 TRANSFAC yes 101157048
chr6 33546554 33546569 TFAP2C JASPAR yes 70349573
chr6 33546554 33546569 TFAP2C JASPAR yes 101157049
chr6 33546558 33546564 MZF1 JASPAR yes 70349574
chr6 33546558 33546564 MZF1 JASPAR yes 101157050
SNP sites on vista51645[chr6:33546480-33546561]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 33546498 rs5745582 C T
IRF1 RUNX3
8974275
chr6 33546513 rs189736325 T C
IRF1 MSC NRL RUNX3 TFAP4
8974276
Genes possibly regulated by vista51645[chr6:33546480-33546561]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 33540329 33548019 - BAK1 ENSG00000030110.8 33548019 0.75 0.99 6481 98542
chr6 33551515 33556803 + GGNBP1 ENSG00000204188.3 33551515 0.97 1.0 6482 95046
chr6 33588142 33664351 + ITPR3 ENSG00000096433.6 33588142 0.84 1.0 6483 58419
Expression level of Genes
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miRNAs possibly regulated by vista51645[chr6:33546480-33546561]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results