EnhancerDB
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  3. vista51669[chr6:34112239-34112588]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51669[chr6:34112239-34112588]
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Tissue distribution of vista51669
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Transcription factor that possibly regulate vista51669[chr6:34112239-34112588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 34112240 34112260 ESR1 JASPAR yes 70350394
chr6 34112244 34112262 ESR2 JASPAR yes 70350395
chr6 34112252 34112263 ESRRA JASPAR yes 70350396
chr6 34112254 34112264 RORA JASPAR yes 70350397
chr6 34112278 34112289 NFKB1 JASPAR yes 70350398
chr6 34112281 34112293 INSM1 JASPAR yes 70350399
chr6 34112288 34112302 EBF1 JASPAR yes 70350400
chr6 34112296 34112308 ZBTB7B JASPAR yes 70350401
chr6 34112304 34112318 ZIC1 JASPAR yes 70350402
chr6 34112323 34112327 LFA1 TRANSFAC yes 70350403
chr6 34112329 34112344 RFX5 JASPAR yes 70350404
chr6 34112357 34112362 SP1 TRANSFAC yes 70350405
chr6 34112367 34112375 SP1 TRANSFAC yes 70350406
chr6 34112368 34112373 SP1 TRANSFAC yes 70350407
chr6 34112369 34112374 SP1 TRANSFAC yes 70350408
chr6 34112369 34112378 HIC2 JASPAR yes 70350409
chr6 34112372 34112376 LFA1 TRANSFAC yes 70350410
chr6 34112409 34112424 ZBTB33 JASPAR yes 70350411
chr6 34112412 34112423 E2F1 JASPAR yes 70350412
chr6 34112413 34112424 E2F4 JASPAR yes 70350413
chr6 34112419 34112429 SP1 JASPAR yes 70350414
chr6 34112419 34112434 ESR2 JASPAR yes 70350415
chr6 34112419 34112439 ESR1 JASPAR yes 70350416
chr6 34112429 34112443 ZIC1 JASPAR yes 70350417
chr6 34112429 34112444 ZIC3 JASPAR yes 70350418
chr6 34112429 34112444 ZIC4 JASPAR yes 70350419
chr6 34112430 34112441 E2F4 JASPAR yes 70350420
chr6 34112430 34112441 E2F6 JASPAR yes 70350421
chr6 34112444 34112459 STAT1 JASPAR yes 70350422
chr6 34112446 34112457 STAT1 JASPAR yes 70350423
chr6 34112446 34112457 STAT3 JASPAR yes 70350424
chr6 34112451 34112456 ETS2 TRANSFAC yes 70350425
chr6 34112474 34112485 NRF1 JASPAR yes 70350426
chr6 34112476 34112484 WT1 TRANSFAC yes 70350427
chr6 34112477 34112498 ZNF263 JASPAR yes 70350428
chr6 34112479 34112485 SP1 TRANSFAC yes 70350429
chr6 34112485 34112489 NFE TRANSFAC yes 70350430
chr6 34112486 34112493 E2F1 TRANSFAC yes 70350431
chr6 34112522 34112532 SP1 JASPAR yes 70350432
chr6 34112524 34112529 SP1 TRANSFAC yes 70350433
chr6 34112524 34112530 SP1 TRANSFAC yes 70350434
chr6 34112524 34112531 SP1 TRANSFAC yes 70350435
chr6 34112528 34112537 ZEB1 JASPAR yes 70350436
chr6 34112531 34112536 USF2 TRANSFAC yes 70350437
chr6 34112535 34112547 TGIF1 JASPAR yes 70350438
chr6 34112535 34112547 TGIF2 JASPAR yes 70350439
chr6 34112553 34112563 ETV1 JASPAR yes 70350440
chr6 34112553 34112563 ETV4 JASPAR yes 70350441
chr6 34112553 34112563 ETV5 JASPAR yes 70350442
SNP sites on vista51669[chr6:34112239-34112588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 34112393 rs75489153 G C no 8978971
chr6 34112501 rs6904041 G A no 8978972
Genes possibly regulated by vista51669[chr6:34112239-34112588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 33989628 34123399 - GRM4 ENSG00000124493.9 34123399 0.88 1.0 6489 89189
chr6 34204650 34214008 + HMGA1 ENSG00000137309.15 34204650 0.91 1.0 6490 7938
Expression level of Genes
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miRNAs possibly regulated by vista51669[chr6:34112239-34112588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results