EnhancerDB
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  3. vista51673[chr6:34202925-34203288]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51673[chr6:34202925-34203288]
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Tissue distribution of vista51673
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Transcription factor that possibly regulate vista51673[chr6:34202925-34203288]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 34202496 34207014 POLR2A UCSC Txn Factor no Conserved 108539794
chr6 34202685 34203265 TAF1 UCSC Txn Factor no Conserved 108539795
chr6 34203091 34203855 MAX UCSC Txn Factor no Conserved 108539796
chr6 34203119 34203464 E2F6 UCSC Txn Factor no Conserved 108539797
chr6 34203240 34203604 TEAD4 UCSC Txn Factor no Conserved 108539798
chr6 34202934 34202943 TFAP2A JASPAR yes 70350662
chr6 34202939 34202951 TFAP2A JASPAR yes 70350663
chr6 34202941 34202950 TFAP2A JASPAR yes 70350664
chr6 34202946 34202950 LFA1 TRANSFAC yes 70350665
chr6 34202950 34202956 SOX10 JASPAR yes 70350666
chr6 34202952 34202964 YY1 JASPAR yes 70350667
chr6 34202957 34202968 E2F6 JASPAR yes 70350668
chr6 34202973 34202979 ZNF354C JASPAR yes 70350669
chr6 34202976 34202996 RREB1 JASPAR yes 70350670
chr6 34202977 34202997 RREB1 JASPAR yes 70350671
chr6 34202978 34202985 SP1 TRANSFAC yes 70350672
chr6 34202979 34202984 SP1 TRANSFAC yes 70350673
chr6 34202979 34202985 SP1 TRANSFAC yes 70350674
chr6 34202979 34202999 RREB1 JASPAR yes 70350675
chr6 34202980 34203000 RREB1 JASPAR yes 70350676
chr6 34202981 34202990 SP1 TRANSFAC yes 70350677
chr6 34202982 34202992 SP1 JASPAR yes 70350678
chr6 34202982 34203002 RREB1 JASPAR yes 70350679
chr6 34202983 34203003 RREB1 JASPAR yes 70350680
chr6 34202984 34202994 ZNF740 JASPAR yes 70350681
chr6 34202987 34203007 RREB1 JASPAR yes 70350682
chr6 34202988 34202998 SP1 JASPAR yes 70350683
chr6 34202991 34203007 ZNF143 JASPAR yes 70350684
chr6 34203001 34203007 SOX10 JASPAR yes 70350685
chr6 34203004 34203022 ESR2 JASPAR yes 70350686
chr6 34203005 34203022 ESR1 JASPAR yes 70350687
chr6 34203006 34203021 ESR2 JASPAR yes 70350688
chr6 34203006 34203026 ESR1 JASPAR yes 70350689
chr6 34203007 34203011 LFA1 TRANSFAC yes 70350690
chr6 34203014 34203019 SP1 TRANSFAC yes 70350691
chr6 34203014 34203020 SP1 TRANSFAC yes 70350692
chr6 34203016 34203037 ZNF263 JASPAR yes 70350693
chr6 34203017 34203023 SP1 TRANSFAC yes 70350694
chr6 34203017 34203027 SP1 JASPAR yes 70350695
chr6 34203042 34203048 SP1 TRANSFAC yes 70350696
chr6 34203042 34203052 SP1 JASPAR yes 70350697
chr6 34203047 34203052 SP1 TRANSFAC yes 70350698
chr6 34203048 34203063 NR2C2 JASPAR yes 70350699
chr6 34203048 34203069 ZNF263 JASPAR yes 70350700
chr6 34203059 34203065 SP1 TRANSFAC yes 70350701
chr6 34203059 34203069 SP1 JASPAR yes 70350702
chr6 34203059 34203069 SP1 TRANSFAC yes 70350703
chr6 34203063 34203075 TFAP2A JASPAR yes 70350704
chr6 34203063 34203075 TFAP2B JASPAR yes 70350705
chr6 34203063 34203078 TFAP2A JASPAR yes 70350706
chr6 34203065 34203074 TFAP2A JASPAR yes 70350707
chr6 34203073 34203078 SP1 TRANSFAC yes 70350708
chr6 34203085 34203098 ELF1 JASPAR yes 70350709
chr6 34203086 34203093 SPI1 JASPAR yes 70350710
chr6 34203086 34203094 FEV JASPAR yes 70350711
chr6 34203088 34203093 ETS2 TRANSFAC yes 70350712
chr6 34203088 34203103 PRDM1 JASPAR yes 70350713
chr6 34203092 34203102 MZF1 JASPAR yes 70350714
chr6 34203092 34203104 E2F8 JASPAR yes 70350715
chr6 34203095 34203101 SP1 TRANSFAC yes 70350716
chr6 34203103 34203109 SP1 TRANSFAC yes 70350717
chr6 34203104 34203109 SP1 TRANSFAC yes 70350718
chr6 34203114 34203124 NFKB1 JASPAR yes 70350719
chr6 34203114 34203125 NFKB1 JASPAR yes 70350720
chr6 34203118 34203133 RFX5 JASPAR yes 70350721
chr6 34203137 34203142 USF2 TRANSFAC yes 70350722
chr6 34203147 34203157 SP1 JASPAR yes 70350723
chr6 34203148 34203156 SP1 TRANSFAC yes 70350724
chr6 34203148 34203157 SP1 TRANSFAC yes 70350725
chr6 34203148 34203158 SP1 JASPAR yes 70350726
chr6 34203149 34203154 SP1 TRANSFAC yes 70350727
chr6 34203149 34203160 E2F4 JASPAR yes 70350728
chr6 34203150 34203155 SP1 TRANSFAC yes 70350729
chr6 34203150 34203156 SP1 TRANSFAC yes 70350730
chr6 34203156 34203167 NRF1 JASPAR yes 70350731
chr6 34203164 34203179 ZIC4 JASPAR yes 70350732
chr6 34203170 34203176 SP1 TRANSFAC yes 70350733
chr6 34203171 34203176 SP1 TRANSFAC yes 70350734
chr6 34203177 34203186 TFAP2A JASPAR yes 70350735
chr6 34203201 34203216 TFAP2A JASPAR yes 70350736
chr6 34203201 34203216 TFAP2C JASPAR yes 70350737
chr6 34203203 34203215 INSM1 JASPAR yes 70350738
chr6 34203204 34203215 TFAP2A JASPAR yes 70350739
chr6 34203205 34203214 TFAP2A JASPAR yes 70350740
chr6 34203222 34203236 PLAG1 JASPAR yes 70350741
chr6 34203222 34203236 RXRB JASPAR yes 70350742
chr6 34203222 34203236 RXRG JASPAR yes 70350743
chr6 34203222 34203237 LEF1 JASPAR yes 70350744
chr6 34203222 34203237 NR2C2 JASPAR yes 70350745
chr6 34203223 34203237 TCF7L2 JASPAR yes 70350746
chr6 34203255 34203266 E2F4 JASPAR yes 70350747
chr6 34203255 34203266 E2F6 JASPAR yes 70350748
chr6 34203255 34203276 ZNF263 JASPAR yes 70350749
chr6 34203256 34203267 E2F1 JASPAR yes 70350750
chr6 34203256 34203268 E2F8 JASPAR yes 70350751
chr6 34203260 34203265 SP1 TRANSFAC yes 70350752
chr6 34203269 34203277 WT1 TRANSFAC yes 70350753
chr6 34203271 34203280 SP1 TRANSFAC yes 70350754
chr6 34203272 34203278 SP1 TRANSFAC yes 70350755
chr6 34203272 34203282 SP1 JASPAR yes 70350756
chr6 34203273 34203280 SP1 TRANSFAC yes 70350757
chr6 34203274 34203279 SP1 TRANSFAC yes 70350758
chr6 34203274 34203280 SP1 TRANSFAC yes 70350759
chr6 34203274 34203281 SP1 TRANSFAC yes 70350760
SNP sites on vista51673[chr6:34202925-34203288]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 34202943 rs533959467 C A,G
POLR2A TAF1 TFAP2A
8979551
chr6 34202978 rs555362285 A C
POLR2A RREB1 SP1 TAF1 ZNF354C
8979552
chr6 34203239 rs571899112 G A
E2F6 MAX POLR2A TAF1
8979553
Genes possibly regulated by vista51673[chr6:34202925-34203288]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 33989628 34123399 - GRM4 ENSG00000124493.9 34123399 0.88 1.0 6489 20474
chr6 34204650 34214008 + HMGA1 ENSG00000137309.15 34204650 0.91 1.0 6490 98638
chr6 34214157 34217247 - C6orf1 ENSG00000186577.7 34217247 0.58 1.0 6491 86041
Expression level of Genes
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miRNAs possibly regulated by vista51673[chr6:34202925-34203288]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr6 34208491 34208513 + hsa-miR-6835-3p MIMAT0027571 34204681 0.034482758620689655 0.0 0.0 1373
Expression level of miRNAs
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