EnhancerDB
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  3. vista5172[chr1:221143804-221143903]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5172[chr1:221143804-221143903]
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Tissue distribution of vista5172
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Transcription factor that possibly regulate vista5172[chr1:221143804-221143903]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 221143836 221143841 NFY TRANSFAC yes 118461796
chr1 221143845 221143851 LEF1 TRANSFAC yes 118461797
chr1 221143845 221143851 SOX10 JASPAR yes 118461798
chr1 221143846 221143861 RFX5 JASPAR yes 118461799
chr1 221143854 221143859 TFAP2A TRANSFAC yes 118461800
chr1 221143854 221143860 MZF1 JASPAR yes 118461801
chr1 221143862 221143871 NFIX JASPAR yes 118461802
chr1 221143862 221143872 NFIA JASPAR yes 118461803
chr1 221143864 221143870 NFIC JASPAR yes 118461804
chr1 221143871 221143886 LEF1 JASPAR yes 118461805
chr1 221143874 221143889 MEF2C JASPAR yes 118461806
chr1 221143875 221143890 MEF2A JASPAR yes 118461807
chr1 221143876 221143888 MEF2A JASPAR yes 118461808
chr1 221143876 221143888 MEF2B JASPAR yes 118461809
chr1 221143876 221143888 MEF2D JASPAR yes 118461810
chr1 221143886 221143890 YY1 TRANSFAC yes 118461811
SNP sites on vista5172[chr1:221143804-221143903]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 221143825 rs142730726 C T no 962967
chr1 221143884 rs114715093 A C
LEF1 MEF2A MEF2B MEF2C MEF2D
962968
Genes possibly regulated by vista5172[chr1:221143804-221143903]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 221051699 221058401 + HLX ENSG00000136630.11 221051699 0.85 0.94 1862 7895
Expression level of Genes
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miRNAs possibly regulated by vista5172[chr1:221143804-221143903]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results