EnhancerDB
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  3. vista51720[chr6:35595279-35595514]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51720[chr6:35595279-35595514]
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Tissue distribution of vista51720
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Transcription factor that possibly regulate vista51720[chr6:35595279-35595514]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 35595290 35595299 PITX3 JASPAR yes 70353171
chr6 35595290 35595300 GSC2 JASPAR yes 70353172
chr6 35595290 35595300 GSC JASPAR yes 70353173
chr6 35595291 35595299 OTX1 JASPAR yes 70353174
chr6 35595291 35595299 OTX2 JASPAR yes 70353175
chr6 35595291 35595299 RHOXF1 JASPAR yes 70353176
chr6 35595293 35595307 GATA2 JASPAR yes 70353177
chr6 35595297 35595305 GATA5 JASPAR yes 70353178
chr6 35595307 35595311 TEAD2 TRANSFAC yes 70353179
chr6 35595313 35595324 FOXA1 JASPAR yes 70353180
chr6 35595322 35595326 YY1 TRANSFAC yes 70353181
chr6 35595331 35595341 TEAD1 JASPAR yes 70353182
chr6 35595357 35595372 HNF1A JASPAR yes 70353183
chr6 35595358 35595371 HNF1B JASPAR yes 70353184
chr6 35595359 35595371 HNF1B JASPAR yes 70353185
chr6 35595383 35595398 LEF1 JASPAR yes 70353186
chr6 35595383 35595398 LEF1 JASPAR yes 101297400
chr6 35595393 35595405 POU2F1 JASPAR yes 70353187
chr6 35595393 35595405 POU2F1 JASPAR yes 101297401
chr6 35595393 35595406 POU3F3 JASPAR yes 70353188
chr6 35595393 35595406 POU3F3 JASPAR yes 101297402
chr6 35595394 35595406 POU3F1 JASPAR yes 70353189
chr6 35595394 35595406 POU3F2 JASPAR yes 70353190
chr6 35595394 35595406 POU3F1 JASPAR yes 101297403
chr6 35595394 35595406 POU3F2 JASPAR yes 101297404
chr6 35595395 35595404 POU3F4 JASPAR yes 70353191
chr6 35595395 35595404 POU5F1B JASPAR yes 70353192
chr6 35595395 35595404 POU3F4 JASPAR yes 101297405
chr6 35595395 35595404 POU5F1B JASPAR yes 101297406
chr6 35595405 35595413 FOXL1 JASPAR yes 70353193
chr6 35595405 35595413 FOXL1 JASPAR yes 101297407
chr6 35595406 35595420 POU4F1 JASPAR yes 70353194
chr6 35595406 35595420 POU4F1 JASPAR yes 101297408
chr6 35595406 35595422 POU4F3 JASPAR yes 70353195
chr6 35595406 35595422 POU4F3 JASPAR yes 101297409
chr6 35595410 35595426 POU4F2 JASPAR yes 70353196
chr6 35595410 35595426 POU4F3 JASPAR yes 70353197
chr6 35595410 35595426 POU4F2 JASPAR yes 101297410
chr6 35595410 35595426 POU4F3 JASPAR yes 101297411
chr6 35595412 35595422 HOXC10 JASPAR yes 70353198
chr6 35595412 35595422 HOXD11 JASPAR yes 70353199
chr6 35595412 35595422 HOXC10 JASPAR yes 101297412
chr6 35595412 35595422 HOXD11 JASPAR yes 101297413
chr6 35595425 35595433 HOXA5 JASPAR yes 70353200
chr6 35595425 35595433 HOXA5 JASPAR yes 101297414
chr6 35595433 35595441 FOXL1 JASPAR yes 70353201
chr6 35595433 35595441 FOXL1 JASPAR yes 101297415
chr6 35595437 35595447 GSX2 JASPAR yes 70353202
chr6 35595437 35595447 MNX1 JASPAR yes 70353203
chr6 35595437 35595447 GSX2 JASPAR yes 101297416
chr6 35595437 35595447 MNX1 JASPAR yes 101297417
chr6 35595438 35595446 BARX1 JASPAR yes 70353204
chr6 35595438 35595446 BARX1 JASPAR yes 101297418
chr6 35595438 35595447 VENTX JASPAR yes 70353205
chr6 35595438 35595447 VENTX JASPAR yes 101297419
chr6 35595439 35595450 PHOX2A JASPAR yes 70353206
chr6 35595439 35595450 PROP1 JASPAR yes 70353207
chr6 35595439 35595450 PHOX2A JASPAR yes 101297420
chr6 35595439 35595450 PROP1 JASPAR yes 101297421
chr6 35595439 35595460 IRF1 JASPAR yes 70353208
chr6 35595439 35595460 IRF1 JASPAR yes 101297422
chr6 35595441 35595450 SRY JASPAR yes 70353209
chr6 35595441 35595450 SRY JASPAR yes 101297423
chr6 35595443 35595455 IRF1 JASPAR yes 70353210
chr6 35595443 35595455 IRF1 JASPAR yes 101297424
chr6 35595443 35595457 IRF7 JASPAR yes 70353211
chr6 35595443 35595457 IRF7 JASPAR yes 101297425
chr6 35595443 35595458 IRF9 JASPAR yes 70353212
chr6 35595443 35595458 IRF9 JASPAR yes 101297426
chr6 35595451 35595457 TCF4 TRANSFAC yes 70353213
chr6 35595451 35595457 TCF4 TRANSFAC yes 101297427
chr6 35595458 35595476 RARA JASPAR yes 70353214
chr6 35595458 35595476 RARA JASPAR yes 101297428
chr6 35595462 35595477 LEF1 JASPAR yes 70353215
chr6 35595462 35595477 LEF1 JASPAR yes 101297429
chr6 35595463 35595477 TCF7L2 JASPAR yes 70353216
chr6 35595463 35595477 TCF7L2 JASPAR yes 101297430
chr6 35595475 35595484 NFIX JASPAR yes 70353217
chr6 35595475 35595484 NFIX JASPAR yes 101297431
chr6 35595475 35595485 NFIA JASPAR yes 70353218
chr6 35595475 35595485 NFIA JASPAR yes 101297432
chr6 35595477 35595483 NFIC JASPAR yes 70353219
chr6 35595477 35595483 NFIC JASPAR yes 101297433
chr6 35595499 35595503 H1TF2 TRANSFAC yes 70353220
chr6 35595499 35595503 NFE TRANSFAC yes 70353221
chr6 35595499 35595503 SRF TRANSFAC yes 70353222
chr6 35595499 35595503 H1TF2 TRANSFAC yes 101297434
chr6 35595499 35595503 NFE TRANSFAC yes 101297435
chr6 35595499 35595503 SRF TRANSFAC yes 101297436
chr6 35595499 35595510 ESRRA JASPAR yes 70353223
chr6 35595499 35595510 ESRRA JASPAR yes 101297437
SNP sites on vista51720[chr6:35595279-35595514]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 35595287 rs532189135 G T no 8989184
chr6 35595358 rs189077569 T C
HNF1A HNF1B
8989185
chr6 35595481 rs141064452 C T
NFIA NFIC NFIX
8989186
Genes possibly regulated by vista51720[chr6:35595279-35595514]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista51720[chr6:35595279-35595514]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results