EnhancerDB
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  3. vista51727[chr6:35875551-35875739]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51727[chr6:35875551-35875739]
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Tissue distribution of vista51727
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Transcription factor that possibly regulate vista51727[chr6:35875551-35875739]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 35875607 35875613 MZF1 JASPAR yes 70353600
chr6 35875621 35875642 ZNF263 JASPAR yes 70353601
chr6 35875627 35875642 NR2C2 JASPAR yes 70353602
chr6 35875628 35875642 RXRB JASPAR yes 70353603
chr6 35875628 35875642 RXRG JASPAR yes 70353604
chr6 35875629 35875637 TBX15 JASPAR yes 70353605
chr6 35875630 35875635 SP1 TRANSFAC yes 70353606
chr6 35875633 35875646 NR2F1 JASPAR yes 70353607
chr6 35875634 35875652 ESR2 JASPAR yes 70353608
chr6 35875635 35875643 NR4A2 JASPAR yes 70353609
chr6 35875635 35875653 RARA JASPAR yes 70353610
chr6 35875636 35875651 ESR2 JASPAR yes 70353611
chr6 35875636 35875656 ESR1 JASPAR yes 70353612
chr6 35875637 35875641 ESR1 TRANSFAC yes 70353613
chr6 35875637 35875651 RORA JASPAR yes 70353614
chr6 35875643 35875649 ESR1 TRANSFAC yes 70353615
chr6 35875645 35875649 ESR1 TRANSFAC yes 70353616
chr6 35875646 35875658 INSM1 JASPAR yes 70353617
chr6 35875648 35875658 GCM2 JASPAR yes 70353618
chr6 35875648 35875668 PPARG JASPAR yes 70353619
chr6 35875649 35875659 ZNF740 JASPAR yes 70353620
chr6 35875649 35875669 PPARG JASPAR yes 70353621
chr6 35875653 35875666 NFKB1 JASPAR yes 70353622
chr6 35875686 35875701 ZBTB33 JASPAR yes 70353623
chr6 35875689 35875704 ZBTB33 JASPAR yes 70353624
chr6 35875720 35875733 ELF3 JASPAR yes 70353625
chr6 35875721 35875731 ETV6 JASPAR yes 70353626
chr6 35875721 35875732 ELF5 JASPAR yes 70353627
chr6 35875721 35875733 EHF JASPAR yes 70353628
chr6 35875721 35875733 ELF1 JASPAR yes 70353629
chr6 35875721 35875733 ELF4 JASPAR yes 70353630
chr6 35875721 35875734 ELF1 JASPAR yes 70353631
chr6 35875721 35875735 SPI1 JASPAR yes 70353632
chr6 35875722 35875729 SPI1 JASPAR yes 70353633
chr6 35875722 35875730 EHF JASPAR yes 70353634
SNP sites on vista51727[chr6:35875551-35875739]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 35875608 rs147006748 TC T
MZF1
8990547
chr6 35875608 rs775603766 TC T
MZF1
8990548
chr6 35875619 rs112790274 G A no 8990549
chr6 35875668 rs145035275 C T
PPARG
8990550
chr6 35875697 rs9462146 G A
ZBTB33
8990551
Genes possibly regulated by vista51727[chr6:35875551-35875739]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 35800743 35889119 - SRPK1 ENSG00000096063.10 35889119 0.78 0.99 6517 86620
Expression level of Genes
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miRNAs possibly regulated by vista51727[chr6:35875551-35875739]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results