EnhancerDB
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  3. vista51730[chr6:36010041-36010276]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51730[chr6:36010041-36010276]
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Tissue distribution of vista51730
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Transcription factor that possibly regulate vista51730[chr6:36010041-36010276]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 36010052 36010063 TBX20 JASPAR yes 70353651
chr6 36010066 36010072 PEA3 TRANSFAC yes 70353652
chr6 36010066 36010072 PEA3 TRANSFAC yes 101318502
chr6 36010074 36010083 SRY JASPAR yes 70353653
chr6 36010074 36010083 SRY JASPAR yes 101318503
chr6 36010109 36010119 GSC JASPAR yes 70353654
chr6 36010109 36010119 GSC JASPAR yes 101318504
chr6 36010116 36010123 SPIB JASPAR yes 70353655
chr6 36010116 36010123 SPIB JASPAR yes 101318505
chr6 36010121 36010137 SOX4 JASPAR yes 70353656
chr6 36010121 36010137 SOX4 JASPAR yes 101318506
chr6 36010122 36010137 SOX21 JASPAR yes 70353657
chr6 36010122 36010137 SOX21 JASPAR yes 101318507
chr6 36010135 36010141 SOX10 JASPAR yes 70353658
chr6 36010135 36010141 SOX10 JASPAR yes 101318508
chr6 36010173 36010177 YY1 TRANSFAC yes 70353659
chr6 36010173 36010177 YY1 TRANSFAC yes 101318509
chr6 36010192 36010197 H4TF1 TRANSFAC yes 70353660
chr6 36010192 36010197 H4TF1 TRANSFAC yes 101318510
chr6 36010202 36010207 ETS2 TRANSFAC yes 70353661
chr6 36010202 36010207 ETS2 TRANSFAC yes 101318511
chr6 36010207 36010215 CREB1 JASPAR yes 70353662
chr6 36010207 36010215 CREB1 JASPAR yes 101318512
chr6 36010209 36010220 CDX2 JASPAR yes 70353663
chr6 36010209 36010220 CDX2 JASPAR yes 101318513
chr6 36010209 36010223 FOXF2 JASPAR yes 70353664
chr6 36010209 36010223 FOXF2 JASPAR yes 101318514
chr6 36010210 36010214 ESR1 TRANSFAC yes 70353665
chr6 36010210 36010214 ESR1 TRANSFAC yes 101318515
chr6 36010210 36010221 HOXA10 JASPAR yes 70353666
chr6 36010210 36010221 HOXC11 JASPAR yes 70353667
chr6 36010210 36010221 HOXC12 JASPAR yes 70353668
chr6 36010210 36010221 HOXD12 JASPAR yes 70353669
chr6 36010210 36010221 HOXA10 JASPAR yes 101318516
chr6 36010210 36010221 HOXC11 JASPAR yes 101318517
chr6 36010210 36010221 HOXC12 JASPAR yes 101318518
chr6 36010210 36010221 HOXD12 JASPAR yes 101318519
chr6 36010211 36010220 CDX1 JASPAR yes 70353670
chr6 36010211 36010220 CDX1 JASPAR yes 101318520
chr6 36010211 36010221 HOXC10 JASPAR yes 70353671
chr6 36010211 36010221 HOXD11 JASPAR yes 70353672
chr6 36010211 36010221 HOXC10 JASPAR yes 101318521
chr6 36010211 36010221 HOXD11 JASPAR yes 101318522
chr6 36010214 36010222 FOXG1 JASPAR yes 70353673
chr6 36010214 36010222 FOXO3 JASPAR yes 70353674
chr6 36010214 36010222 FOXG1 JASPAR yes 101318523
chr6 36010214 36010222 FOXO3 JASPAR yes 101318524
chr6 36010214 36010223 SRY JASPAR yes 70353675
chr6 36010214 36010223 SRY JASPAR yes 101318525
chr6 36010229 36010243 PAX6 JASPAR yes 70353676
chr6 36010229 36010243 PAX6 JASPAR yes 101318526
chr6 36010243 36010248 ETS2 TRANSFAC yes 70353677
chr6 36010243 36010248 ETS2 TRANSFAC yes 101318527
chr6 36010247 36010268 IRF1 JASPAR yes 70353678
chr6 36010247 36010268 IRF1 JASPAR yes 101318528
chr6 36010248 36010269 IRF1 JASPAR yes 70353679
chr6 36010248 36010269 IRF1 JASPAR yes 101318529
chr6 36010249 36010270 IRF1 JASPAR yes 70353680
chr6 36010249 36010270 IRF1 JASPAR yes 101318530
chr6 36010250 36010265 FOXP1 JASPAR yes 70353681
chr6 36010250 36010265 FOXP1 JASPAR yes 101318531
chr6 36010250 36010271 IRF1 JASPAR yes 70353682
chr6 36010250 36010271 IRF1 JASPAR yes 101318532
chr6 36010251 36010272 IRF1 JASPAR yes 70353683
chr6 36010251 36010272 IRF1 JASPAR yes 101318533
chr6 36010252 36010267 FOXP1 JASPAR yes 70353684
chr6 36010252 36010267 FOXP1 JASPAR yes 101318534
chr6 36010252 36010273 IRF1 JASPAR yes 70353685
chr6 36010252 36010273 IRF1 JASPAR yes 101318535
chr6 36010253 36010268 FOXP1 JASPAR yes 70353686
chr6 36010253 36010268 FOXP1 JASPAR yes 101318536
chr6 36010253 36010274 IRF1 JASPAR yes 70353687
chr6 36010253 36010274 IRF1 JASPAR yes 101318537
chr6 36010254 36010269 FOXP1 JASPAR yes 70353688
chr6 36010254 36010269 FOXP1 JASPAR yes 101318538
chr6 36010254 36010275 IRF1 JASPAR yes 70353689
chr6 36010254 36010275 IRF1 JASPAR yes 101318539
chr6 36010255 36010270 FOXP1 JASPAR yes 70353690
chr6 36010255 36010270 FOXP1 JASPAR yes 101318540
chr6 36010256 36010271 FOXP1 JASPAR yes 70353691
chr6 36010256 36010271 FOXP1 JASPAR yes 101318541
chr6 36010257 36010272 FOXP1 JASPAR yes 70353692
chr6 36010257 36010272 FOXP1 JASPAR yes 101318542
chr6 36010258 36010273 FOXP1 JASPAR yes 70353693
chr6 36010258 36010273 FOXP1 JASPAR yes 101318543
chr6 36010259 36010274 FOXP1 JASPAR yes 70353694
chr6 36010259 36010274 FOXP1 JASPAR yes 101318544
chr6 36010260 36010275 FOXP1 JASPAR yes 70353695
chr6 36010260 36010275 FOXP1 JASPAR yes 101318545
chr6 36010261 36010276 FOXP1 JASPAR yes 70353696
chr6 36010261 36010276 FOXP1 JASPAR yes 101318546
chr6 36010263 36010283 RREB1 JASPAR yes 70353697
chr6 36010263 36010283 RREB1 JASPAR yes 101318547
chr6 36010264 36010279 MEF2C JASPAR yes 70353698
chr6 36010264 36010279 MEF2C JASPAR yes 101318548
chr6 36010267 36010287 RREB1 JASPAR yes 70353699
chr6 36010267 36010287 RREB1 JASPAR yes 101318549
SNP sites on vista51730[chr6:36010041-36010276]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 36010078 rs72657684 G C
SRY
8991258
chr6 36010096 rs547363186 G T no 8991259
chr6 36010097 rs201817008 TG T no 8991260
chr6 36010150 rs851020 G C no 8991261
chr6 36010187 rs538031576 C T no 8991262
Genes possibly regulated by vista51730[chr6:36010041-36010276]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 35911291 35992645 - SLC26A8 ENSG00000112053.9 35992645 0.94 1.0 6518 82604
chr6 35995488 36079013 + MAPK14 ENSG00000112062.6 35995488 0.63 0.99 6519 85447
chr6 36095586 36107842 + MAPK13 ENSG00000156711.12 36095586 0.65 1.0 6520 14690
Expression level of Genes
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miRNAs possibly regulated by vista51730[chr6:36010041-36010276]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results