EnhancerDB
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  3. vista51808[chr6:37227057-37227393]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51808[chr6:37227057-37227393]
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Tissue distribution of vista51808
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Transcription factor that possibly regulate vista51808[chr6:37227057-37227393]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 37227062 37227077 SOX21 JASPAR yes 70357929
chr6 37227083 37227099 SOX8 JASPAR yes 70357930
chr6 37227092 37227107 FOXP1 JASPAR yes 70357931
chr6 37227110 37227121 ELK4 JASPAR yes 70357932
chr6 37227110 37227121 FLI1 JASPAR yes 70357933
chr6 37227111 37227121 ERF JASPAR yes 70357934
chr6 37227111 37227121 ETS1 JASPAR yes 70357935
chr6 37227111 37227121 ETV6 JASPAR yes 70357936
chr6 37227111 37227121 GABPA JASPAR yes 70357937
chr6 37227111 37227124 ELF1 JASPAR yes 70357938
chr6 37227112 37227119 SPI1 JASPAR yes 70357939
chr6 37227112 37227120 EHF JASPAR yes 70357940
chr6 37227112 37227120 FEV JASPAR yes 70357941
chr6 37227118 37227124 NFIC JASPAR yes 70357942
chr6 37227124 37227138 STAT1 JASPAR yes 70357943
chr6 37227125 37227136 DUX4 JASPAR yes 70357944
chr6 37227128 37227133 ETS2 TRANSFAC yes 70357945
chr6 37227128 37227143 PRDM1 JASPAR yes 70357946
chr6 37227134 37227139 ETS2 TRANSFAC yes 70357947
chr6 37227134 37227147 ELF3 JASPAR yes 70357948
chr6 37227135 37227146 ELF5 JASPAR yes 70357949
chr6 37227135 37227147 EHF JASPAR yes 70357950
chr6 37227135 37227147 ELF4 JASPAR yes 70357951
chr6 37227136 37227144 EHF JASPAR yes 70357952
chr6 37227138 37227157 PAX5 JASPAR yes 70357953
chr6 37227168 37227171 MYB TRANSFAC yes 70357954
chr6 37227176 37227190 EBF1 JASPAR yes 70357955
chr6 37227183 37227193 NFKB1 JASPAR yes 70357956
chr6 37227183 37227193 RELA JASPAR yes 70357957
chr6 37227183 37227193 REL JASPAR yes 70357958
chr6 37227183 37227194 NFKB1 JASPAR yes 70357959
chr6 37227188 37227194 ETS1 JASPAR yes 70357960
chr6 37227192 37227207 JUND JASPAR yes 70357961
chr6 37227195 37227210 JUND JASPAR yes 70357962
chr6 37227196 37227209 JUN JASPAR yes 70357963
chr6 37227199 37227209 POU6F2 JASPAR yes 70357964
chr6 37227200 37227211 HOXC11 JASPAR yes 70357965
chr6 37227200 37227211 HOXC12 JASPAR yes 70357966
chr6 37227201 37227211 HOXC10 JASPAR yes 70357967
chr6 37227201 37227211 HOXD11 JASPAR yes 70357968
chr6 37227202 37227213 PROP1 JASPAR yes 70357969
chr6 37227203 37227207 YY1 TRANSFAC yes 70357970
chr6 37227227 37227231 TEAD2 TRANSFAC yes 70357971
chr6 37227232 37227246 ONECUT1 JASPAR yes 70357972
chr6 37227232 37227246 ONECUT2 JASPAR yes 70357973
chr6 37227232 37227246 ONECUT3 JASPAR yes 70357974
chr6 37227235 37227245 CUX1 JASPAR yes 70357975
chr6 37227235 37227245 CUX2 JASPAR yes 70357976
chr6 37227236 37227245 SOX9 JASPAR yes 70357977
chr6 37227255 37227268 ELF1 JASPAR yes 70357978
chr6 37227257 37227268 ELF5 JASPAR yes 70357979
chr6 37227258 37227269 FLI1 JASPAR yes 70357980
chr6 37227279 37227293 CREB3 JASPAR yes 70357981
chr6 37227279 37227293 CREB3L1 JASPAR yes 70357982
chr6 37227280 37227292 HES7 JASPAR yes 70357983
chr6 37227324 37227333 SRY JASPAR yes 70357984
chr6 37227326 37227329 MYB TRANSFAC yes 70357985
chr6 37227344 37227355 FLI1 JASPAR yes 70357986
chr6 37227345 37227349 YY1 TRANSFAC yes 70357987
chr6 37227345 37227355 ERF JASPAR yes 70357988
chr6 37227345 37227355 ERG JASPAR yes 70357989
chr6 37227345 37227355 ETS1 JASPAR yes 70357990
chr6 37227345 37227355 FEV JASPAR yes 70357991
chr6 37227345 37227355 FLI1 JASPAR yes 70357992
chr6 37227345 37227356 ETV2 JASPAR yes 70357993
chr6 37227345 37227358 ELF1 JASPAR yes 70357994
chr6 37227346 37227354 FEV JASPAR yes 70357995
chr6 37227354 37227358 YY1 TRANSFAC yes 70357996
chr6 37227359 37227366 GATA1 TRANSFAC yes 70357997
chr6 37227362 37227366 TEAD2 TRANSFAC yes 70357998
SNP sites on vista51808[chr6:37227057-37227393]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 37227096 rs9462289 T G
FOXP1 SOX8
9000186
chr6 37227194 rs575452181 G A,T
ETS1 JUND NFKB1
9000187
chr6 37227236 rs73419823 T G
CUX1 CUX2 ONECUT1 ONECUT2 ONECUT3 SOX9
9000188
chr6 37227347 rs531689872 A G,T
ELF1 ERF ERG ETS1 ETV2 FEV FLI1 YY1
9000189
chr6 37227350 rs541953212 T G
ELF1 ERF ERG ETS1 ETV2 FEV FLI1
9000190
chr6 37227352 rs146712047 C T
ELF1 ERF ERG ETS1 ETV2 FEV FLI1
9000191
Genes possibly regulated by vista51808[chr6:37227057-37227393]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 37137979 37143202 + PIM1 ENSG00000137193.9 37137979 0.77 0.99 6538 10922
chr6 37179956 37225931 - TMEM217 ENSG00000172738.7 37225931 0.83 1.0 6539 98874
chr6 37225548 37300746 + TBC1D22B ENSG00000065491.8 37225548 0.56 0.99 6540 98491
chr6 37321748 37362514 + RNF8 ENSG00000112130.12 37321748 0.66 0.99 6541 5645
Expression level of Genes
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miRNAs possibly regulated by vista51808[chr6:37227057-37227393]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results