EnhancerDB
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  3. vista51818[chr6:37471092-37471543]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51818[chr6:37471092-37471543]
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Tissue distribution of vista51818
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Transcription factor that possibly regulate vista51818[chr6:37471092-37471543]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 37471097 37471107 MSC JASPAR yes 70358430
chr6 37471102 37471106 NFE TRANSFAC yes 70358431
chr6 37471102 37471115 SMAD2 JASPAR yes 70358432
chr6 37471106 37471110 NFE TRANSFAC yes 70358433
chr6 37471106 37471119 SMAD2 JASPAR yes 70358434
chr6 37471110 37471114 NFE TRANSFAC yes 70358435
chr6 37471114 37471118 NFE TRANSFAC yes 70358436
chr6 37471117 37471128 HOXA10 JASPAR yes 70358437
chr6 37471118 37471127 CDX1 JASPAR yes 70358438
chr6 37471118 37471129 CDX2 JASPAR yes 70358439
chr6 37471121 37471136 TFAP2C JASPAR yes 70358440
chr6 37471123 37471137 EBF1 JASPAR yes 70358441
chr6 37471171 37471180 NKX3-2 JASPAR yes 70358442
chr6 37471201 37471208 MEIS1 JASPAR yes 70358443
chr6 37471201 37471209 MEIS2 JASPAR yes 70358444
chr6 37471230 37471249 REST JASPAR yes 70358445
chr6 37471250 37471263 NR2F1 JASPAR yes 70358446
chr6 37471250 37471271 REST JASPAR yes 70358447
chr6 37471252 37471263 ESRRA JASPAR yes 70358448
chr6 37471252 37471263 ESRRB JASPAR yes 70358449
chr6 37471261 37471265 LFA1 TRANSFAC yes 70358450
chr6 37471266 37471270 ESR1 TRANSFAC yes 70358451
chr6 37471315 37471320 TFAP2A TRANSFAC yes 70358452
chr6 37471315 37471321 MZF1 JASPAR yes 70358453
chr6 37471338 37471353 STAT2 JASPAR yes 70358454
chr6 37471339 37471353 SPI1 JASPAR yes 70358455
chr6 37471345 37471358 POU2F2 JASPAR yes 70358456
chr6 37471353 37471364 ESRRA JASPAR yes 70358457
chr6 37471353 37471364 ESRRB JASPAR yes 70358458
chr6 37471354 37471368 RORA JASPAR yes 70358459
chr6 37471355 37471365 RORA JASPAR yes 70358460
chr6 37471364 37471368 YY1 TRANSFAC yes 70358461
chr6 37471377 37471380 MYB TRANSFAC yes 70358462
chr6 37471377 37471390 ELF1 JASPAR yes 70358463
chr6 37471394 37471405 ELF5 JASPAR yes 70358464
chr6 37471397 37471402 ETS2 TRANSFAC yes 70358465
chr6 37471422 37471426 TEAD2 TRANSFAC yes 70358466
chr6 37471422 37471427 TBP TRANSFAC yes 70358467
chr6 37471436 37471439 MYB TRANSFAC yes 70358468
chr6 37471442 37471449 JUN TRANSFAC yes 70358469
chr6 37471452 37471467 LEF1 JASPAR yes 70358470
chr6 37471459 37471470 PHOX2A JASPAR yes 70358471
chr6 37471459 37471470 PROP1 JASPAR yes 70358472
chr6 37471470 37471483 SMAD2 JASPAR yes 70358473
chr6 37471513 37471517 TEAD2 TRANSFAC yes 70358474
chr6 37471513 37471523 ALX3 JASPAR yes 70358475
chr6 37471513 37471523 GSX2 JASPAR yes 70358476
chr6 37471513 37471523 MNX1 JASPAR yes 70358477
chr6 37471514 37471522 LMX1A JASPAR yes 70358478
chr6 37471514 37471522 LMX1B JASPAR yes 70358479
chr6 37471514 37471522 NKX6-1 JASPAR yes 70358480
chr6 37471514 37471522 NKX6-2 JASPAR yes 70358481
chr6 37471514 37471522 VAX1 JASPAR yes 70358482
chr6 37471514 37471522 VAX2 JASPAR yes 70358483
chr6 37471514 37471522 VSX1 JASPAR yes 70358484
chr6 37471514 37471522 VSX2 JASPAR yes 70358485
chr6 37471523 37471535 PKNOX1 JASPAR yes 70358486
chr6 37471523 37471535 PKNOX2 JASPAR yes 70358487
chr6 37471523 37471535 TGIF1 JASPAR yes 70358488
chr6 37471523 37471535 TGIF2 JASPAR yes 70358489
chr6 37471524 37471534 MSC JASPAR yes 70358490
chr6 37471529 37471533 NFE TRANSFAC yes 70358491
SNP sites on vista51818[chr6:37471092-37471543]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 37471097 rs115028985 G A
MSC
9001381
chr6 37471109 rs6912838 G A
NFE SMAD2
9001382
chr6 37471325 rs372307286 C T no 9001383
Genes possibly regulated by vista51818[chr6:37471092-37471543]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 37400995 37450603 + CMTR1 ENSG00000137200.8 37400995 0.56 0.99 6542 29903
chr6 37450696 37467698 - CCDC167 ENSG00000198937.8 37467698 0.84 0.99 6543 96606
Expression level of Genes
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miRNAs possibly regulated by vista51818[chr6:37471092-37471543]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results