EnhancerDB
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  3. vista51828[chr6:37663186-37663424]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51828[chr6:37663186-37663424]
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Tissue distribution of vista51828
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Transcription factor that possibly regulate vista51828[chr6:37663186-37663424]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 37663190 37663203 SMAD2 JASPAR yes 70359118
chr6 37663191 37663196 SP1 TRANSFAC yes 70359119
chr6 37663214 37663225 PHOX2A JASPAR yes 70359120
chr6 37663216 37663226 POU6F2 JASPAR yes 70359121
chr6 37663217 37663227 EMX1 JASPAR yes 70359122
chr6 37663217 37663227 EMX2 JASPAR yes 70359123
chr6 37663217 37663227 ESX1 JASPAR yes 70359124
chr6 37663217 37663227 GBX1 JASPAR yes 70359125
chr6 37663217 37663227 GBX2 JASPAR yes 70359126
chr6 37663217 37663227 GSX1 JASPAR yes 70359127
chr6 37663217 37663227 GSX2 JASPAR yes 70359128
chr6 37663217 37663227 HESX1 JASPAR yes 70359129
chr6 37663217 37663227 HOXA2 JASPAR yes 70359130
chr6 37663217 37663227 HOXB2 JASPAR yes 70359131
chr6 37663217 37663227 HOXB3 JASPAR yes 70359132
chr6 37663217 37663227 LBX2 JASPAR yes 70359133
chr6 37663217 37663227 LHX2 JASPAR yes 70359134
chr6 37663217 37663227 LHX6 JASPAR yes 70359135
chr6 37663217 37663227 MEOX1 JASPAR yes 70359136
chr6 37663217 37663227 MEOX2 JASPAR yes 70359137
chr6 37663217 37663227 MIXL1 JASPAR yes 70359138
chr6 37663217 37663227 MNX1 JASPAR yes 70359139
chr6 37663217 37663227 NOTO JASPAR yes 70359140
chr6 37663217 37663227 POU6F1 JASPAR yes 70359141
chr6 37663217 37663227 RAX JASPAR yes 70359142
chr6 37663218 37663226 BSX JASPAR yes 70359143
chr6 37663218 37663226 DLX6 JASPAR yes 70359144
chr6 37663218 37663226 EN1 JASPAR yes 70359145
chr6 37663218 37663226 ISX JASPAR yes 70359146
chr6 37663218 37663226 LBX1 JASPAR yes 70359147
chr6 37663218 37663226 LHX9 JASPAR yes 70359148
chr6 37663218 37663226 LMX1A JASPAR yes 70359149
chr6 37663218 37663226 LMX1B JASPAR yes 70359150
chr6 37663218 37663226 NKX6-1 JASPAR yes 70359151
chr6 37663218 37663226 NKX6-2 JASPAR yes 70359152
chr6 37663218 37663226 PAX4 JASPAR yes 70359153
chr6 37663218 37663226 PDX1 JASPAR yes 70359154
chr6 37663218 37663226 PRRX1 JASPAR yes 70359155
chr6 37663218 37663226 RAX2 JASPAR yes 70359156
chr6 37663218 37663226 SHOX JASPAR yes 70359157
chr6 37663218 37663226 UNCX JASPAR yes 70359158
chr6 37663218 37663226 VAX1 JASPAR yes 70359159
chr6 37663218 37663226 VAX2 JASPAR yes 70359160
chr6 37663218 37663226 VSX1 JASPAR yes 70359161
chr6 37663218 37663226 VSX2 JASPAR yes 70359162
chr6 37663236 37663250 TLX1 JASPAR yes 70359163
chr6 37663239 37663249 NEUROG2 JASPAR yes 70359164
chr6 37663241 37663259 TP53 JASPAR yes 70359165
chr6 37663242 37663262 TP53 JASPAR yes 70359166
chr6 37663243 37663258 TP53 JASPAR yes 70359167
chr6 37663291 37663295 LFA1 TRANSFAC yes 70359168
chr6 37663308 37663320 TGIF1 JASPAR yes 70359169
chr6 37663308 37663320 TGIF2 JASPAR yes 70359170
chr6 37663361 37663372 FOSL2 JASPAR yes 70359171
chr6 37663363 37663378 MAFK JASPAR yes 70359172
chr6 37663364 37663370 ESR1 TRANSFAC yes 70359173
chr6 37663366 37663370 ESR1 TRANSFAC yes 70359174
chr6 37663370 37663391 REST JASPAR yes 70359175
chr6 37663371 37663390 REST JASPAR yes 70359176
chr6 37663395 37663407 NHLH1 JASPAR yes 70359177
chr6 37663398 37663403 USF2 TRANSFAC yes 70359178
SNP sites on vista51828[chr6:37663186-37663424]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 37663231 rs575351040 C T no 9003219
chr6 37663351 rs11961416 C T no 9003220
Genes possibly regulated by vista51828[chr6:37663186-37663424]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 37600284 37667082 - MDGA1 ENSG00000112139.10 37667082 0.82 1.0 6544 96342
Expression level of Genes
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miRNAs possibly regulated by vista51828[chr6:37663186-37663424]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results