EnhancerDB
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  3. vista51854[chr6:39194520-39194703]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51854[chr6:39194520-39194703]
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Tissue distribution of vista51854
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Transcription factor that possibly regulate vista51854[chr6:39194520-39194703]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 39194523 39194536 JUN JASPAR yes 70360183
chr6 39194523 39194536 JUN JASPAR yes 101518370
chr6 39194524 39194538 BATF3 JASPAR yes 70360184
chr6 39194524 39194538 BATF3 JASPAR yes 101518371
chr6 39194525 39194537 JDP2 JASPAR yes 70360185
chr6 39194525 39194537 JDP2 JASPAR yes 101518372
chr6 39194527 39194542 MAFK JASPAR yes 70360186
chr6 39194527 39194542 MAFK JASPAR yes 101518373
chr6 39194531 39194542 NRL JASPAR yes 70360187
chr6 39194531 39194542 NRL JASPAR yes 101518374
chr6 39194552 39194565 POU2F2 JASPAR yes 70360188
chr6 39194552 39194565 POU2F2 JASPAR yes 101518375
chr6 39194553 39194568 PRDM1 JASPAR yes 70360189
chr6 39194553 39194568 PRDM1 JASPAR yes 101518376
chr6 39194554 39194558 YY1 TRANSFAC yes 70360190
chr6 39194554 39194558 YY1 TRANSFAC yes 101518377
chr6 39194554 39194568 STAT1 JASPAR yes 70360191
chr6 39194554 39194568 STAT1 JASPAR yes 101518378
chr6 39194555 39194567 IRF1 JASPAR yes 70360192
chr6 39194555 39194567 IRF1 JASPAR yes 101518379
chr6 39194560 39194564 YY1 TRANSFAC yes 70360193
chr6 39194560 39194564 YY1 TRANSFAC yes 101518380
chr6 39194568 39194578 REL JASPAR yes 70360194
chr6 39194568 39194578 REL JASPAR yes 101518381
chr6 39194568 39194579 NFKB1 JASPAR yes 70360195
chr6 39194568 39194579 NFKB1 JASPAR yes 101518382
chr6 39194569 39194579 REL JASPAR yes 70360196
chr6 39194569 39194579 REL JASPAR yes 101518383
chr6 39194585 39194590 ETS2 TRANSFAC yes 70360197
chr6 39194585 39194590 ETS2 TRANSFAC yes 101518384
chr6 39194600 39194605 MYC TRANSFAC yes 70360198
chr6 39194600 39194605 MYC TRANSFAC yes 101518385
chr6 39194600 39194620 RREB1 JASPAR yes 70360199
chr6 39194600 39194620 RREB1 JASPAR yes 101518386
chr6 39194648 39194652 NFE TRANSFAC yes 70360200
chr6 39194648 39194652 NFE TRANSFAC yes 101518387
chr6 39194671 39194675 TEAD2 TRANSFAC yes 70360201
chr6 39194671 39194675 TEAD2 TRANSFAC yes 101518388
chr6 39194692 39194706 TLX1 JASPAR yes 70360202
chr6 39194692 39194706 TLX1 JASPAR yes 101518389
chr6 39194693 39194707 TLX1 JASPAR yes 70360203
chr6 39194693 39194707 TLX1 JASPAR yes 101518390
SNP sites on vista51854[chr6:39194520-39194703]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 39194528 rs80315052 T C
BATF3 JDP2 JUN MAFK
9011236
chr6 39194533 rs2815125 T C
BATF3 JDP2 JUN MAFK NRL
9011237
chr6 39194599 rs185876066 C T no 9011238
chr6 39194618 rs191223395 G A
RREB1
9011239
Genes possibly regulated by vista51854[chr6:39194520-39194703]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 39156749 39197226 - KCNK5 ENSG00000164626.8 39197226 0.85 1.0 6551 97477
chr6 39266777 39282329 - KCNK17 ENSG00000124780.9 39282329 0.91 0.0 6552 12374
chr6 39282474 39290744 - KCNK16 ENSG00000095981.6 39290744 1.0 0.0 6553 3959
Expression level of Genes
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miRNAs possibly regulated by vista51854[chr6:39194520-39194703]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results