EnhancerDB
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  3. vista51862[chr6:39329332-39329605]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51862[chr6:39329332-39329605]
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Tissue distribution of vista51862
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Transcription factor that possibly regulate vista51862[chr6:39329332-39329605]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 39329332 39329347 FOXP1 JASPAR yes 70360452
chr6 39329333 39329348 FOXP1 JASPAR yes 70360453
chr6 39329333 39329354 IRF1 JASPAR yes 70360454
chr6 39329334 39329349 FOXP1 JASPAR yes 70360455
chr6 39329334 39329355 IRF1 JASPAR yes 70360456
chr6 39329335 39329350 FOXP1 JASPAR yes 70360457
chr6 39329335 39329356 IRF1 JASPAR yes 70360458
chr6 39329336 39329351 FOXP1 JASPAR yes 70360459
chr6 39329336 39329357 IRF1 JASPAR yes 70360460
chr6 39329337 39329352 FOXP1 JASPAR yes 70360461
chr6 39329337 39329358 IRF1 JASPAR yes 70360462
chr6 39329338 39329353 FOXP1 JASPAR yes 70360463
chr6 39329338 39329359 IRF1 JASPAR yes 70360464
chr6 39329339 39329354 FOXP1 JASPAR yes 70360465
chr6 39329339 39329360 IRF1 JASPAR yes 70360466
chr6 39329340 39329355 FOXP1 JASPAR yes 70360467
chr6 39329341 39329356 FOXP1 JASPAR yes 70360468
chr6 39329341 39329362 IRF1 JASPAR yes 70360469
chr6 39329342 39329357 FOXP1 JASPAR yes 70360470
chr6 39329351 39329366 ZIC3 JASPAR yes 70360471
chr6 39329351 39329366 ZIC4 JASPAR yes 70360472
chr6 39329351 39329367 GLIS1 JASPAR yes 70360473
chr6 39329352 39329366 GLIS2 JASPAR yes 70360474
chr6 39329379 39329384 ETS2 TRANSFAC yes 70360475
chr6 39329395 39329406 E2F6 JASPAR yes 70360476
chr6 39329423 39329437 EBF1 JASPAR yes 70360477
chr6 39329423 39329438 TFAP2A JASPAR yes 70360478
chr6 39329424 39329435 EBF1 JASPAR yes 70360479
chr6 39329454 39329465 FOXA1 JASPAR yes 70360480
chr6 39329482 39329492 ID4 JASPAR yes 70360481
chr6 39329482 39329492 TCF3 JASPAR yes 70360482
chr6 39329482 39329492 TCF4 JASPAR yes 70360483
chr6 39329483 39329492 SNAI2 JASPAR yes 70360484
chr6 39329484 39329489 USF2 TRANSFAC yes 70360485
chr6 39329489 39329502 ZBTB18 JASPAR yes 70360486
chr6 39329519 39329534 TFAP2A JASPAR yes 70360487
chr6 39329519 39329534 TFAP2C JASPAR yes 70360488
chr6 39329520 39329531 TFAP2A JASPAR yes 70360489
chr6 39329520 39329531 TFAP2B JASPAR yes 70360490
chr6 39329520 39329531 TFAP2C JASPAR yes 70360491
chr6 39329521 39329530 TFAP2A JASPAR yes 70360492
chr6 39329525 39329540 LEF1 JASPAR yes 70360493
chr6 39329526 39329540 TCF7L2 JASPAR yes 70360494
chr6 39329528 39329536 TCF4 TRANSFAC yes 70360495
chr6 39329529 39329535 LEF1 TRANSFAC yes 70360496
chr6 39329529 39329535 TCF4 TRANSFAC yes 70360497
chr6 39329543 39329557 PLAG1 JASPAR yes 70360498
chr6 39329552 39329566 PLAG1 JASPAR yes 70360499
chr6 39329552 39329567 NR2C2 JASPAR yes 70360500
chr6 39329553 39329563 SP1 JASPAR yes 70360501
chr6 39329554 39329564 SP1 JASPAR yes 70360502
chr6 39329555 39329559 LFA1 TRANSFAC yes 70360503
chr6 39329559 39329578 PAX5 JASPAR yes 70360504
chr6 39329561 39329566 SP1 TRANSFAC yes 70360505
chr6 39329562 39329579 PAX9 JASPAR yes 70360506
chr6 39329573 39329587 CREB3L1 JASPAR yes 70360507
chr6 39329578 39329595 RARA JASPAR yes 70360508
chr6 39329578 39329595 RXRA JASPAR yes 70360509
chr6 39329579 39329583 ESR1 TRANSFAC yes 70360510
chr6 39329579 39329599 RREB1 JASPAR yes 70360511
chr6 39329580 39329590 TFAP4 JASPAR yes 70360512
chr6 39329583 39329603 RREB1 JASPAR yes 70360513
chr6 39329596 39329601 SP1 TRANSFAC yes 70360514
chr6 39329600 39329604 LFA1 TRANSFAC yes 70360515
SNP sites on vista51862[chr6:39329332-39329605]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 39329463 rs143383592 C T
FOXA1
9012511
chr6 39329509 rs145590821 C T no 9012512
chr6 39329552 rs9380849 C G,T
NR2C2 PLAG1
9012513
chr6 39329561 rs148874725 G C
NR2C2 PAX5 PLAG1 SP1
9012514
chr6 39329565 rs577012462 C G
NR2C2 PAX5 PAX9 PLAG1 SP1
9012515
chr6 39329590 rs545681933 G A
RARA RREB1 RXRA TFAP4
9012516
Genes possibly regulated by vista51862[chr6:39329332-39329605]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 39266777 39282329 - KCNK17 ENSG00000124780.9 39282329 0.91 0.0 6552 52997
chr6 39282474 39290744 - KCNK16 ENSG00000095981.6 39290744 1.0 0.0 6553 61412
Expression level of Genes
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miRNAs possibly regulated by vista51862[chr6:39329332-39329605]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results