EnhancerDB
  1. Home
  2. Enhancers
  3. vista51865[chr6:39654865-39655018]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51865[chr6:39654865-39655018]
Back to top
Tissue distribution of vista51865
Back to top
Transcription factor that possibly regulate vista51865[chr6:39654865-39655018]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 39654886 39654906 RREB1 JASPAR yes 70360581
chr6 39654886 39654906 RREB1 JASPAR yes 101546075
chr6 39654908 39654918 NFATC3 JASPAR yes 70360582
chr6 39654908 39654918 NFATC3 JASPAR yes 101546076
chr6 39654910 39654917 NFATC2 JASPAR yes 70360583
chr6 39654910 39654917 NFATC2 JASPAR yes 101546077
chr6 39654924 39654936 HLF JASPAR yes 70360584
chr6 39654924 39654936 HLF JASPAR yes 101546078
chr6 39654927 39654942 RUNX2 JASPAR yes 70360585
chr6 39654927 39654942 RUNX2 JASPAR yes 101546079
chr6 39654949 39654965 SOX8 JASPAR yes 70360586
chr6 39654949 39654965 SOX8 JASPAR yes 101546080
chr6 39654955 39654964 SOX9 JASPAR yes 70360587
chr6 39654955 39654964 SOX9 JASPAR yes 101546081
chr6 39654969 39654984 PRDM1 JASPAR yes 70360588
chr6 39654969 39654984 PRDM1 JASPAR yes 101546082
chr6 39654983 39654993 SP1 JASPAR yes 70360589
chr6 39654983 39654993 SP1 JASPAR yes 101546083
chr6 39654985 39654989 LFA1 TRANSFAC yes 70360590
chr6 39654985 39654989 LFA1 TRANSFAC yes 101546084
chr6 39654990 39654994 LFA1 TRANSFAC yes 70360591
chr6 39654990 39654994 LFA1 TRANSFAC yes 101546085
chr6 39655016 39655022 SOX10 JASPAR yes 70360592
chr6 39655016 39655022 SOX10 JASPAR yes 101546086
SNP sites on vista51865[chr6:39654865-39655018]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista51865[chr6:39654865-39655018]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 39297766 39693181 - KIF6 ENSG00000164627.13 39693181 0.89 0.94 6554 61837
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51865[chr6:39654865-39655018]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results