EnhancerDB
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  3. vista51866[chr6:39665088-39665338]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51866[chr6:39665088-39665338]
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Tissue distribution of vista51866
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Transcription factor that possibly regulate vista51866[chr6:39665088-39665338]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 39665116 39665120 NFE TRANSFAC yes 70360593
chr6 39665116 39665120 NFE TRANSFAC yes 101546109
chr6 39665124 39665138 RXRB JASPAR yes 70360594
chr6 39665124 39665138 RXRG JASPAR yes 70360595
chr6 39665124 39665138 RXRB JASPAR yes 101546110
chr6 39665124 39665138 RXRG JASPAR yes 101546111
chr6 39665143 39665147 NFE TRANSFAC yes 70360596
chr6 39665143 39665147 NFE TRANSFAC yes 101546112
chr6 39665157 39665161 NFE TRANSFAC yes 70360597
chr6 39665157 39665161 NFE TRANSFAC yes 101546113
chr6 39665162 39665172 MAX JASPAR yes 70360598
chr6 39665162 39665172 MAX JASPAR yes 101546114
chr6 39665162 39665173 USF2 JASPAR yes 70360599
chr6 39665162 39665173 USF2 JASPAR yes 101546115
chr6 39665169 39665190 IRF1 JASPAR yes 70360600
chr6 39665169 39665190 IRF1 JASPAR yes 101546116
chr6 39665170 39665176 PEA3 TRANSFAC yes 70360601
chr6 39665170 39665176 PEA3 TRANSFAC yes 101546117
chr6 39665172 39665186 IRF8 JASPAR yes 70360602
chr6 39665172 39665186 IRF8 JASPAR yes 101546118
chr6 39665173 39665187 STAT1 JASPAR yes 70360603
chr6 39665173 39665187 STAT1 JASPAR yes 101546119
chr6 39665173 39665188 STAT2 JASPAR yes 70360604
chr6 39665173 39665188 STAT2 JASPAR yes 101546120
chr6 39665191 39665203 BHLHE23 JASPAR yes 70360605
chr6 39665191 39665203 BHLHE23 JASPAR yes 101546121
chr6 39665192 39665202 OLIG1 JASPAR yes 70360606
chr6 39665192 39665202 OLIG2 JASPAR yes 70360607
chr6 39665192 39665202 OLIG3 JASPAR yes 70360608
chr6 39665192 39665202 OLIG1 JASPAR yes 101546122
chr6 39665192 39665202 OLIG2 JASPAR yes 101546123
chr6 39665192 39665202 OLIG3 JASPAR yes 101546124
chr6 39665192 39665207 MEF2A JASPAR yes 70360609
chr6 39665192 39665207 MEF2A JASPAR yes 101546125
chr6 39665193 39665208 MEF2C JASPAR yes 70360610
chr6 39665193 39665208 MEF2C JASPAR yes 101546126
chr6 39665194 39665206 MEF2A JASPAR yes 70360611
chr6 39665194 39665206 MEF2B JASPAR yes 70360612
chr6 39665194 39665206 MEF2D JASPAR yes 70360613
chr6 39665194 39665206 MEF2A JASPAR yes 101546127
chr6 39665194 39665206 MEF2B JASPAR yes 101546128
chr6 39665194 39665206 MEF2D JASPAR yes 101546129
chr6 39665195 39665205 MEF2A JASPAR yes 70360614
chr6 39665195 39665205 MEF2A JASPAR yes 101546130
chr6 39665196 39665200 YY1 TRANSFAC yes 70360615
chr6 39665196 39665200 YY1 TRANSFAC yes 101546131
chr6 39665211 39665222 NFIL3 JASPAR yes 70360616
chr6 39665211 39665222 NFIL3 JASPAR yes 101546132
chr6 39665212 39665224 DBP JASPAR yes 70360617
chr6 39665212 39665224 HLF JASPAR yes 70360618
chr6 39665212 39665224 TEF JASPAR yes 70360619
chr6 39665212 39665224 DBP JASPAR yes 101546133
chr6 39665212 39665224 HLF JASPAR yes 101546134
chr6 39665212 39665224 TEF JASPAR yes 101546135
chr6 39665214 39665225 NFIL3 JASPAR yes 70360620
chr6 39665214 39665225 NFIL3 JASPAR yes 101546136
chr6 39665219 39665231 FOXC2 JASPAR yes 70360621
chr6 39665219 39665231 FOXC2 JASPAR yes 101546137
chr6 39665223 39665227 H1TF2 TRANSFAC yes 70360622
chr6 39665223 39665227 NFE TRANSFAC yes 70360623
chr6 39665223 39665227 SRF TRANSFAC yes 70360624
chr6 39665223 39665227 H1TF2 TRANSFAC yes 101546138
chr6 39665223 39665227 NFE TRANSFAC yes 101546139
chr6 39665223 39665227 SRF TRANSFAC yes 101546140
chr6 39665223 39665233 HOXA13 JASPAR yes 70360625
chr6 39665223 39665233 HOXB13 JASPAR yes 70360626
chr6 39665223 39665233 HOXD13 JASPAR yes 70360627
chr6 39665223 39665233 HOXA13 JASPAR yes 101546141
chr6 39665223 39665233 HOXB13 JASPAR yes 101546142
chr6 39665223 39665233 HOXD13 JASPAR yes 101546143
chr6 39665236 39665250 GLIS2 JASPAR yes 70360628
chr6 39665236 39665250 GLIS2 JASPAR yes 101546144
chr6 39665238 39665250 INSM1 JASPAR yes 70360629
chr6 39665238 39665250 INSM1 JASPAR yes 101546145
chr6 39665242 39665255 NFKB1 JASPAR yes 70360630
chr6 39665242 39665255 NFKB1 JASPAR yes 101546146
chr6 39665243 39665253 NFKB1 JASPAR yes 70360631
chr6 39665243 39665253 RELA JASPAR yes 70360632
chr6 39665243 39665253 REL JASPAR yes 70360633
chr6 39665243 39665253 NFKB1 JASPAR yes 101546147
chr6 39665243 39665253 RELA JASPAR yes 101546148
chr6 39665243 39665253 REL JASPAR yes 101546149
chr6 39665243 39665254 NFKB1 JASPAR yes 70360634
chr6 39665243 39665254 NFKB1 JASPAR yes 101546150
chr6 39665263 39665268 MYB TRANSFAC yes 70360635
chr6 39665263 39665268 MYB TRANSFAC yes 101546151
chr6 39665281 39665293 MEF2A JASPAR yes 70360636
chr6 39665281 39665293 MEF2B JASPAR yes 70360637
chr6 39665281 39665293 MEF2D JASPAR yes 70360638
chr6 39665281 39665293 MEF2A JASPAR yes 101546152
chr6 39665281 39665293 MEF2B JASPAR yes 101546153
chr6 39665281 39665293 MEF2D JASPAR yes 101546154
chr6 39665282 39665292 MEF2A JASPAR yes 70360639
chr6 39665282 39665292 MEF2A JASPAR yes 101546155
chr6 39665294 39665297 MYB TRANSFAC yes 70360640
chr6 39665294 39665297 MYB TRANSFAC yes 101546156
chr6 39665298 39665302 YY1 TRANSFAC yes 70360641
chr6 39665298 39665302 YY1 TRANSFAC yes 101546157
chr6 39665301 39665316 FOXP1 JASPAR yes 70360642
chr6 39665301 39665316 FOXP1 JASPAR yes 101546158
chr6 39665307 39665328 IRF1 JASPAR yes 70360643
chr6 39665307 39665328 IRF1 JASPAR yes 101546159
chr6 39665308 39665313 GATA2 JASPAR yes 70360644
chr6 39665308 39665313 GATA2 JASPAR yes 101546160
chr6 39665309 39665324 PRDM1 JASPAR yes 70360645
chr6 39665309 39665324 PRDM1 JASPAR yes 101546161
chr6 39665310 39665324 SPIC JASPAR yes 70360646
chr6 39665310 39665324 SPIC JASPAR yes 101546162
chr6 39665311 39665332 IRF1 JASPAR yes 70360647
chr6 39665311 39665332 IRF1 JASPAR yes 101546163
chr6 39665312 39665327 FOXP1 JASPAR yes 70360648
chr6 39665312 39665327 FOXP1 JASPAR yes 101546164
chr6 39665312 39665333 IRF1 JASPAR yes 70360649
chr6 39665312 39665333 IRF1 JASPAR yes 101546165
chr6 39665313 39665334 IRF1 JASPAR yes 70360650
chr6 39665313 39665334 IRF1 JASPAR yes 101546166
chr6 39665314 39665329 FOXP1 JASPAR yes 70360651
chr6 39665314 39665329 FOXP1 JASPAR yes 101546167
chr6 39665314 39665335 IRF1 JASPAR yes 70360652
chr6 39665314 39665335 IRF1 JASPAR yes 101546168
chr6 39665315 39665336 IRF1 JASPAR yes 70360653
chr6 39665315 39665336 IRF1 JASPAR yes 101546169
chr6 39665316 39665331 FOXP1 JASPAR yes 70360654
chr6 39665316 39665331 FOXP1 JASPAR yes 101546170
chr6 39665316 39665337 IRF1 JASPAR yes 70360655
chr6 39665316 39665337 IRF1 JASPAR yes 101546171
chr6 39665317 39665332 FOXP1 JASPAR yes 70360656
chr6 39665317 39665332 FOXP1 JASPAR yes 101546172
chr6 39665318 39665333 FOXP1 JASPAR yes 70360657
chr6 39665318 39665333 FOXP1 JASPAR yes 101546173
chr6 39665319 39665334 FOXP1 JASPAR yes 70360658
chr6 39665319 39665334 FOXP1 JASPAR yes 101546174
chr6 39665320 39665335 FOXP1 JASPAR yes 70360659
chr6 39665320 39665335 FOXP1 JASPAR yes 101546175
chr6 39665321 39665336 FOXP1 JASPAR yes 70360660
chr6 39665321 39665336 FOXP1 JASPAR yes 101546176
chr6 39665322 39665337 FOXP1 JASPAR yes 70360661
chr6 39665322 39665337 FOXP1 JASPAR yes 101546177
SNP sites on vista51866[chr6:39665088-39665338]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 39665317 rs35838361 CT C
FOXP1 IRF1 PRDM1 SPIC
9014030
chr6 39665317 rs398001273 CT C
FOXP1 IRF1 PRDM1 SPIC
9014031
Genes possibly regulated by vista51866[chr6:39665088-39665338]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 39297766 39693181 - KIF6 ENSG00000164627.13 39693181 0.89 0.94 6554 72157
chr6 39760142 39872648 + DAAM2 ENSG00000146122.12 39760142 0.92 1.0 6555 5196
Expression level of Genes
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miRNAs possibly regulated by vista51866[chr6:39665088-39665338]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results