EnhancerDB
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  3. vista51879[chr6:40463742-40464103]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51879[chr6:40463742-40464103]
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Tissue distribution of vista51879
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Transcription factor that possibly regulate vista51879[chr6:40463742-40464103]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 40463744 40463750 NFIC JASPAR yes 70361121
chr6 40463746 40463750 H1TF2 TRANSFAC yes 70361122
chr6 40463746 40463750 NFE TRANSFAC yes 70361123
chr6 40463746 40463750 SRF TRANSFAC yes 70361124
chr6 40463781 40463787 HiNF-A TRANSFAC yes 70361125
chr6 40463790 40463810 RREB1 JASPAR yes 70361126
chr6 40463795 40463801 ZNF354C JASPAR yes 70361127
chr6 40463802 40463815 ZBTB18 JASPAR yes 70361128
chr6 40463832 40463844 TEAD1 JASPAR yes 70361129
chr6 40463847 40463858 FLI1 JASPAR yes 70361130
chr6 40463847 40463858 FLI1 JASPAR yes 101595250
chr6 40463849 40463857 EHF JASPAR yes 70361131
chr6 40463849 40463857 EHF JASPAR yes 101595251
chr6 40463851 40463858 SPIB JASPAR yes 70361132
chr6 40463851 40463858 SPIB JASPAR yes 101595252
chr6 40463857 40463865 MGA JASPAR yes 70361133
chr6 40463857 40463865 MGA JASPAR yes 101595253
chr6 40463858 40463873 RUNX2 JASPAR yes 70361134
chr6 40463858 40463873 RUNX2 JASPAR yes 101595254
chr6 40463875 40463879 NFE TRANSFAC yes 70361135
chr6 40463875 40463879 NFE TRANSFAC yes 101595255
chr6 40463876 40463881 GATA2 JASPAR yes 70361136
chr6 40463876 40463881 GATA2 JASPAR yes 101595256
chr6 40463907 40463918 DMRT3 JASPAR yes 70361137
chr6 40463907 40463918 DMRT3 JASPAR yes 101595257
chr6 40463911 40463916 GATA2 JASPAR yes 70361138
chr6 40463911 40463916 GATA2 JASPAR yes 101595258
chr6 40463925 40463946 ZNF263 JASPAR yes 70361139
chr6 40463925 40463946 ZNF263 JASPAR yes 101595259
chr6 40463956 40463960 H4TF2 TRANSFAC yes 70361140
chr6 40463956 40463960 H4TF2 TRANSFAC yes 101595260
chr6 40463989 40463993 YY1 TRANSFAC yes 70361141
chr6 40463989 40463993 YY1 TRANSFAC yes 101595261
chr6 40464005 40464010 GATA2 JASPAR yes 70361142
chr6 40464005 40464010 GATA2 JASPAR yes 101595262
chr6 40464008 40464016 MEIS2 JASPAR yes 70361143
chr6 40464008 40464016 MEIS3 JASPAR yes 70361144
chr6 40464008 40464016 MEIS2 JASPAR yes 101595263
chr6 40464008 40464016 MEIS3 JASPAR yes 101595264
chr6 40464009 40464013 NFE TRANSFAC yes 70361145
chr6 40464009 40464013 NFE TRANSFAC yes 101595265
chr6 40464021 40464042 ZNF263 JASPAR yes 70361146
chr6 40464021 40464042 ZNF263 JASPAR yes 101595266
chr6 40464067 40464077 TFCP2 JASPAR yes 70361147
chr6 40464067 40464077 TFCP2 JASPAR yes 101595267
chr6 40464078 40464093 ESR2 JASPAR yes 70361148
chr6 40464078 40464093 ESR2 JASPAR yes 101595268
chr6 40464079 40464083 ESR1 TRANSFAC yes 70361149
chr6 40464079 40464083 ESR1 TRANSFAC yes 101595269
chr6 40464084 40464088 ESR1 TRANSFAC yes 70361150
chr6 40464084 40464088 ESR1 TRANSFAC yes 101595270
chr6 40464085 40464095 SREBF1 JASPAR yes 70361151
chr6 40464085 40464095 SREBF2 JASPAR yes 70361152
chr6 40464085 40464095 SREBF1 JASPAR yes 101595271
chr6 40464085 40464095 SREBF2 JASPAR yes 101595272
SNP sites on vista51879[chr6:40463742-40464103]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 40463760 rs576735335 C T no 9019384
chr6 40463818 rs141861367 G A no 9019385
chr6 40463864 rs58238437 C A,T
MGA RUNX2
9019386
chr6 40464073 rs140926392 G A
TFCP2
9019387
Genes possibly regulated by vista51879[chr6:40463742-40464103]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 40359325 40555204 - LRFN2 ENSG00000156564.8 40555204 0.89 0.94 6557 8899
Expression level of Genes
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miRNAs possibly regulated by vista51879[chr6:40463742-40464103]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results