EnhancerDB
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  3. vista51894[chr6:41202488-41202701]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51894[chr6:41202488-41202701]
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Tissue distribution of vista51894
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Transcription factor that possibly regulate vista51894[chr6:41202488-41202701]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41202488 41202499 NFE2 JASPAR yes 70361718
chr6 41202491 41202506 RUNX2 JASPAR yes 70361719
chr6 41202493 41202503 TFEC JASPAR yes 70361720
chr6 41202493 41202504 USF2 JASPAR yes 70361721
chr6 41202494 41202504 MAX JASPAR yes 70361722
chr6 41202510 41202513 MYB TRANSFAC yes 70361723
chr6 41202510 41202521 PHOX2A JASPAR yes 70361724
chr6 41202514 41202518 H1TF2 TRANSFAC yes 70361725
chr6 41202514 41202518 NFE TRANSFAC yes 70361726
chr6 41202514 41202518 SRF TRANSFAC yes 70361727
chr6 41202528 41202541 POU2F2 JASPAR yes 70361728
chr6 41202529 41202540 FOXB1 JASPAR yes 70361729
chr6 41202529 41202541 POU3F1 JASPAR yes 70361730
chr6 41202529 41202541 POU3F2 JASPAR yes 70361731
chr6 41202529 41202542 POU3F3 JASPAR yes 70361732
chr6 41202530 41202534 YY1 TRANSFAC yes 70361733
chr6 41202531 41202540 POU3F4 JASPAR yes 70361734
chr6 41202531 41202540 POU5F1B JASPAR yes 70361735
chr6 41202536 41202540 YY1 TRANSFAC yes 70361736
chr6 41202542 41202558 POU4F3 JASPAR yes 70361737
chr6 41202550 41202554 YY1 TRANSFAC yes 70361738
chr6 41202600 41202604 ESR1 TRANSFAC yes 70361739
chr6 41202603 41202607 YY1 TRANSFAC yes 70361740
chr6 41202607 41202619 GRHL1 JASPAR yes 70361741
chr6 41202615 41202633 MAFF JASPAR yes 70361742
chr6 41202616 41202631 MAFK JASPAR yes 70361743
chr6 41202620 41202631 NRL JASPAR yes 70361744
chr6 41202636 41202646 POU6F2 JASPAR yes 70361745
chr6 41202637 41202647 ALX3 JASPAR yes 70361746
chr6 41202637 41202647 EMX2 JASPAR yes 70361747
chr6 41202637 41202647 ESX1 JASPAR yes 70361748
chr6 41202637 41202647 GBX2 JASPAR yes 70361749
chr6 41202637 41202647 GSX1 JASPAR yes 70361750
chr6 41202637 41202647 GSX2 JASPAR yes 70361751
chr6 41202637 41202647 HESX1 JASPAR yes 70361752
chr6 41202637 41202647 HOXB2 JASPAR yes 70361753
chr6 41202637 41202647 HOXB3 JASPAR yes 70361754
chr6 41202637 41202647 LBX2 JASPAR yes 70361755
chr6 41202637 41202647 LHX2 JASPAR yes 70361756
chr6 41202637 41202647 LHX6 JASPAR yes 70361757
chr6 41202637 41202647 MEOX1 JASPAR yes 70361758
chr6 41202637 41202647 MEOX2 JASPAR yes 70361759
chr6 41202637 41202647 MIXL1 JASPAR yes 70361760
chr6 41202637 41202647 MNX1 JASPAR yes 70361761
chr6 41202637 41202647 NOTO JASPAR yes 70361762
chr6 41202637 41202647 POU6F1 JASPAR yes 70361763
chr6 41202637 41202647 RAX JASPAR yes 70361764
chr6 41202638 41202646 BSX JASPAR yes 70361765
chr6 41202638 41202646 DLX6 JASPAR yes 70361766
chr6 41202638 41202646 EN1 JASPAR yes 70361767
chr6 41202638 41202646 ISX JASPAR yes 70361768
chr6 41202638 41202646 LBX1 JASPAR yes 70361769
chr6 41202638 41202646 LHX9 JASPAR yes 70361770
chr6 41202638 41202646 LMX1A JASPAR yes 70361771
chr6 41202638 41202646 LMX1B JASPAR yes 70361772
chr6 41202638 41202646 NKX6-1 JASPAR yes 70361773
chr6 41202638 41202646 NKX6-2 JASPAR yes 70361774
chr6 41202638 41202646 PAX4 JASPAR yes 70361775
chr6 41202638 41202646 PDX1 JASPAR yes 70361776
chr6 41202638 41202646 PRRX1 JASPAR yes 70361777
chr6 41202638 41202646 RAX2 JASPAR yes 70361778
chr6 41202638 41202646 SHOX JASPAR yes 70361779
chr6 41202638 41202646 UNCX JASPAR yes 70361780
chr6 41202638 41202646 VAX1 JASPAR yes 70361781
chr6 41202638 41202646 VAX2 JASPAR yes 70361782
chr6 41202638 41202646 VSX1 JASPAR yes 70361783
chr6 41202638 41202646 VSX2 JASPAR yes 70361784
chr6 41202638 41202648 MEF2A JASPAR yes 70361785
chr6 41202659 41202670 DUX4 JASPAR yes 70361786
chr6 41202659 41202670 PHOX2A JASPAR yes 70361787
chr6 41202659 41202670 PROP1 JASPAR yes 70361788
chr6 41202670 41202684 STAT1 JASPAR yes 70361789
chr6 41202676 41202680 YY1 TRANSFAC yes 70361790
chr6 41202686 41202696 MAX JASPAR yes 70361791
chr6 41202696 41202700 H4TF2 TRANSFAC yes 70361792
SNP sites on vista51894[chr6:41202488-41202701]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41202498 rs9349184 T C
MAX NFE2 RUNX2 TFEC USF2
9023931
chr6 41202560 rs565417907 C T no 9023932
chr6 41202576 rs115252352 A G no 9023933
chr6 41202695 rs116730720 G A
MAX
9023934
Genes possibly regulated by vista51894[chr6:41202488-41202701]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41117080 41122075 - TREML1 ENSG00000161911.7 41122075 0.94 0.0 6563 19587
chr6 41126244 41130924 - TREM2 ENSG00000095970.12 41130924 0.92 1.0 6564 28436
chr6 41158015 41168932 - TREML2 ENSG00000112195.8 41168932 0.89 0.95 6565 66444
chr6 41196062 41206620 + TREML4 ENSG00000188056.7 41196062 0.96 0.95 6566 93574
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 48244
Expression level of Genes
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miRNAs possibly regulated by vista51894[chr6:41202488-41202701]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results