EnhancerDB
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  3. vista51895[chr6:41210309-41210360]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51895[chr6:41210309-41210360]
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Tissue distribution of vista51895
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Transcription factor that possibly regulate vista51895[chr6:41210309-41210360]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41210310 41210326 SRF JASPAR yes 70361793
chr6 41210310 41210328 SRF JASPAR yes 70361794
chr6 41210311 41210323 SRF JASPAR yes 70361795
chr6 41210313 41210325 SRF JASPAR yes 70361796
chr6 41210315 41210329 SPI1 JASPAR yes 70361797
chr6 41210329 41210333 TEAD2 TRANSFAC yes 70361798
chr6 41210331 41210334 MYB TRANSFAC yes 70361799
chr6 41210335 41210345 HMBOX1 JASPAR yes 70361800
chr6 41210335 41210350 HNF1A JASPAR yes 70361801
chr6 41210336 41210349 HNF1B JASPAR yes 70361802
chr6 41210337 41210340 MYB TRANSFAC yes 70361803
chr6 41210337 41210347 PAX3 JASPAR yes 70361804
chr6 41210337 41210347 PAX7 JASPAR yes 70361805
chr6 41210338 41210348 POU6F2 JASPAR yes 70361806
chr6 41210339 41210349 ALX3 JASPAR yes 70361807
chr6 41210339 41210349 EMX2 JASPAR yes 70361808
chr6 41210339 41210349 ESX1 JASPAR yes 70361809
chr6 41210339 41210349 GBX2 JASPAR yes 70361810
chr6 41210339 41210349 GSX1 JASPAR yes 70361811
chr6 41210339 41210349 GSX2 JASPAR yes 70361812
chr6 41210339 41210349 HESX1 JASPAR yes 70361813
chr6 41210339 41210349 HOXB2 JASPAR yes 70361814
chr6 41210339 41210349 HOXB3 JASPAR yes 70361815
chr6 41210339 41210349 LBX2 JASPAR yes 70361816
chr6 41210339 41210349 LHX2 JASPAR yes 70361817
chr6 41210339 41210349 LHX6 JASPAR yes 70361818
chr6 41210339 41210349 MEOX1 JASPAR yes 70361819
chr6 41210339 41210349 MEOX2 JASPAR yes 70361820
chr6 41210339 41210349 MIXL1 JASPAR yes 70361821
chr6 41210339 41210349 MNX1 JASPAR yes 70361822
chr6 41210339 41210349 NOTO JASPAR yes 70361823
chr6 41210339 41210349 POU6F1 JASPAR yes 70361824
chr6 41210339 41210349 RAX JASPAR yes 70361825
chr6 41210340 41210348 BSX JASPAR yes 70361826
chr6 41210340 41210348 DLX6 JASPAR yes 70361827
chr6 41210340 41210348 EN1 JASPAR yes 70361828
chr6 41210340 41210348 ISX JASPAR yes 70361829
chr6 41210340 41210348 LBX1 JASPAR yes 70361830
chr6 41210340 41210348 LHX9 JASPAR yes 70361831
chr6 41210340 41210348 LMX1A JASPAR yes 70361832
chr6 41210340 41210348 LMX1B JASPAR yes 70361833
chr6 41210340 41210348 NKX6-1 JASPAR yes 70361834
chr6 41210340 41210348 NKX6-2 JASPAR yes 70361835
chr6 41210340 41210348 PAX4 JASPAR yes 70361836
chr6 41210340 41210348 PDX1 JASPAR yes 70361837
chr6 41210340 41210348 PRRX1 JASPAR yes 70361838
chr6 41210340 41210348 RAX2 JASPAR yes 70361839
chr6 41210340 41210348 SHOX JASPAR yes 70361840
chr6 41210340 41210348 UNCX JASPAR yes 70361841
chr6 41210340 41210348 VAX1 JASPAR yes 70361842
chr6 41210340 41210348 VAX2 JASPAR yes 70361843
chr6 41210340 41210348 VSX1 JASPAR yes 70361844
chr6 41210340 41210348 VSX2 JASPAR yes 70361845
chr6 41210340 41210350 HOXD13 JASPAR yes 70361846
chr6 41210340 41210356 POU4F2 JASPAR yes 70361847
chr6 41210340 41210356 POU4F3 JASPAR yes 70361848
chr6 41210341 41210352 FOXB1 JASPAR yes 70361849
chr6 41210341 41210352 PHOX2A JASPAR yes 70361850
chr6 41210341 41210352 PROP1 JASPAR yes 70361851
chr6 41210342 41210356 POU4F1 JASPAR yes 70361852
chr6 41210349 41210353 YY1 TRANSFAC yes 70361853
SNP sites on vista51895[chr6:41210309-41210360]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista51895[chr6:41210309-41210360]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41117080 41122075 - TREML1 ENSG00000161911.7 41122075 0.94 0.0 6563 11766
chr6 41126244 41130924 - TREM2 ENSG00000095970.12 41130924 0.92 1.0 6564 20615
chr6 41158015 41168932 - TREML2 ENSG00000112195.8 41168932 0.89 0.95 6565 58623
chr6 41196062 41206620 + TREML4 ENSG00000188056.7 41196062 0.96 0.95 6566 85753
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 55903
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 6967
Expression level of Genes
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miRNAs possibly regulated by vista51895[chr6:41210309-41210360]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results