EnhancerDB
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  3. vista51897[chr6:41214844-41215190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51897[chr6:41214844-41215190]
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Tissue distribution of vista51897
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Transcription factor that possibly regulate vista51897[chr6:41214844-41215190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41214844 41214852 TBX15 JASPAR yes 70361888
chr6 41214866 41214880 EBF1 JASPAR yes 70361889
chr6 41214867 41214881 PLAG1 JASPAR yes 70361890
chr6 41214873 41214888 HNF4A JASPAR yes 70361891
chr6 41214874 41214888 NR2F1 JASPAR yes 70361892
chr6 41214874 41214889 HNF4G JASPAR yes 70361893
chr6 41214888 41214903 HSF1 JASPAR yes 70361894
chr6 41214889 41214902 HSF1 JASPAR yes 70361895
chr6 41214889 41214902 HSF4 JASPAR yes 70361896
chr6 41214891 41214906 STAT1 JASPAR yes 70361897
chr6 41214893 41214904 STAT1 JASPAR yes 70361898
chr6 41214893 41214904 STAT3 JASPAR yes 70361899
chr6 41214913 41214918 ATF1 TRANSFAC yes 70361900
chr6 41214913 41214926 HSF2 JASPAR yes 70361901
chr6 41214917 41214932 HSF1 JASPAR yes 70361902
chr6 41214918 41214931 HSF1 JASPAR yes 70361903
chr6 41214918 41214931 HSF2 JASPAR yes 70361904
chr6 41214918 41214931 HSF4 JASPAR yes 70361905
chr6 41214932 41214940 EHF JASPAR yes 70361906
chr6 41214947 41214961 IRF8 JASPAR yes 70361907
chr6 41214954 41214974 RREB1 JASPAR yes 70361908
chr6 41214961 41214966 SP1 TRANSFAC yes 70361909
chr6 41214962 41214967 SP1 TRANSFAC yes 70361910
chr6 41214969 41214974 TFAP2A TRANSFAC yes 70361911
chr6 41214969 41214975 MZF1 JASPAR yes 70361912
chr6 41214979 41214984 ETS2 TRANSFAC yes 70361913
chr6 41215006 41215020 GLIS2 JASPAR yes 70361914
chr6 41215016 41215020 H4TF2 TRANSFAC yes 70361915
chr6 41215029 41215047 ESR1 JASPAR yes 70361916
chr6 41215036 41215055 PAX5 JASPAR yes 70361917
chr6 41215037 41215045 TBX5 JASPAR yes 70361918
chr6 41215037 41215046 ZEB1 JASPAR yes 70361919
chr6 41215037 41215050 ZBTB18 JASPAR yes 70361920
chr6 41215038 41215048 ID4 JASPAR yes 70361921
chr6 41215038 41215048 NHLH1 JASPAR yes 70361922
chr6 41215038 41215048 TCF3 JASPAR yes 70361923
chr6 41215038 41215048 TCF4 JASPAR yes 70361924
chr6 41215039 41215048 SNAI2 JASPAR yes 70361925
chr6 41215040 41215045 USF2 TRANSFAC yes 70361926
chr6 41215047 41215057 RELA JASPAR yes 70361927
chr6 41215052 41215058 ETS1 JASPAR yes 70361928
chr6 41215059 41215073 SPIC JASPAR yes 70361929
chr6 41215065 41215069 LFA1 TRANSFAC yes 70361930
chr6 41215071 41215084 ZBTB18 JASPAR yes 70361931
chr6 41215072 41215082 MSC JASPAR yes 70361932
chr6 41215072 41215082 MYF6 JASPAR yes 70361933
chr6 41215072 41215082 NHLH1 JASPAR yes 70361934
chr6 41215072 41215082 TFAP4 JASPAR yes 70361935
chr6 41215086 41215101 ZBTB33 JASPAR yes 70361936
chr6 41215089 41215102 ZBED1 JASPAR yes 70361937
chr6 41215089 41215104 ZBTB33 JASPAR yes 70361938
chr6 41215108 41215122 ZIC1 JASPAR yes 70361939
chr6 41215108 41215123 ZIC4 JASPAR yes 70361940
chr6 41215124 41215140 ZNF143 JASPAR yes 70361941
chr6 41215125 41215130 TFAP2A TRANSFAC yes 70361942
chr6 41215125 41215131 MZF1 JASPAR yes 70361943
chr6 41215132 41215137 SP1 TRANSFAC yes 70361944
chr6 41215136 41215140 H4TF2 TRANSFAC yes 70361945
chr6 41215150 41215153 MYB TRANSFAC yes 70361946
chr6 41215151 41215165 SPI1 JASPAR yes 70361947
chr6 41215157 41215167 EN2 JASPAR yes 70361948
chr6 41215157 41215167 GBX1 JASPAR yes 70361949
chr6 41215157 41215167 GBX2 JASPAR yes 70361950
chr6 41215157 41215167 LBX2 JASPAR yes 70361951
chr6 41215157 41215167 LHX2 JASPAR yes 70361952
chr6 41215158 41215166 BARX1 JASPAR yes 70361953
chr6 41215158 41215166 BSX JASPAR yes 70361954
chr6 41215158 41215166 EN1 JASPAR yes 70361955
chr6 41215158 41215166 ISX JASPAR yes 70361956
chr6 41215158 41215166 LHX9 JASPAR yes 70361957
chr6 41215158 41215166 MSX1 JASPAR yes 70361958
chr6 41215158 41215166 MSX2 JASPAR yes 70361959
chr6 41215158 41215166 PRRX1 JASPAR yes 70361960
chr6 41215158 41215166 RAX2 JASPAR yes 70361961
chr6 41215158 41215166 SHOX JASPAR yes 70361962
SNP sites on vista51897[chr6:41214844-41215190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41214979 rs559011265 C T
ETS2
9023939
chr6 41214981 rs7742483 G A
ETS2
9023940
chr6 41215007 rs77990139 C T
GLIS2
9023941
chr6 41215026 rs574820965 T C no 9023942
chr6 41215058 rs9394778 G A
ETS1
9023943
chr6 41215076 rs114559610 A C
MSC MYF6 NHLH1 TFAP4 ZBTB18
9023944
chr6 41215102 rs551956639 G T
ZBED1 ZBTB33
9023945
Genes possibly regulated by vista51897[chr6:41214844-41215190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41117080 41122075 - TREML1 ENSG00000161911.7 41122075 0.94 0.0 6563 7231
chr6 41126244 41130924 - TREM2 ENSG00000095970.12 41130924 0.92 1.0 6564 16080
chr6 41158015 41168932 - TREML2 ENSG00000112195.8 41168932 0.89 0.95 6565 54088
chr6 41196062 41206620 + TREML4 ENSG00000188056.7 41196062 0.96 0.95 6566 81218
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 60733
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 11797
Expression level of Genes
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miRNAs possibly regulated by vista51897[chr6:41214844-41215190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results