EnhancerDB
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  3. vista51900[chr6:41238379-41238420]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51900[chr6:41238379-41238420]
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Tissue distribution of vista51900
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Transcription factor that possibly regulate vista51900[chr6:41238379-41238420]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41238384 41238388 YY1 TRANSFAC yes 70362019
chr6 41238384 41238388 YY1 TRANSFAC yes 101637865
chr6 41238393 41238405 SRF JASPAR yes 70362020
chr6 41238393 41238405 SRF JASPAR yes 101637866
chr6 41238395 41238407 BHLHE23 JASPAR yes 70362021
chr6 41238395 41238407 BHLHE23 JASPAR yes 101637867
chr6 41238396 41238406 BHLHE22 JASPAR yes 70362022
chr6 41238396 41238406 NEUROD2 JASPAR yes 70362023
chr6 41238396 41238406 OLIG1 JASPAR yes 70362024
chr6 41238396 41238406 OLIG2 JASPAR yes 70362025
chr6 41238396 41238406 OLIG3 JASPAR yes 70362026
chr6 41238396 41238406 BHLHE22 JASPAR yes 101637868
chr6 41238396 41238406 NEUROD2 JASPAR yes 101637869
chr6 41238396 41238406 OLIG1 JASPAR yes 101637870
chr6 41238396 41238406 OLIG2 JASPAR yes 101637871
chr6 41238396 41238406 OLIG3 JASPAR yes 101637872
chr6 41238396 41238408 TAL1 JASPAR yes 70362027
chr6 41238396 41238408 TAL1 JASPAR yes 101637873
chr6 41238413 41238431 IRF2 JASPAR yes 70362028
chr6 41238413 41238431 IRF2 JASPAR yes 101637874
chr6 41238414 41238435 IRF1 JASPAR yes 70362029
chr6 41238414 41238435 IRF1 JASPAR yes 101637875
chr6 41238416 41238431 STAT2 JASPAR yes 70362030
chr6 41238416 41238431 STAT2 JASPAR yes 101637876
chr6 41238418 41238430 IRF1 JASPAR yes 70362031
chr6 41238418 41238430 IRF1 JASPAR yes 101637877
chr6 41238418 41238432 IRF7 JASPAR yes 70362032
chr6 41238418 41238432 IRF7 JASPAR yes 101637878
SNP sites on vista51900[chr6:41238379-41238420]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista51900[chr6:41238379-41238420]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41158015 41168932 - TREML2 ENSG00000112195.8 41168932 0.89 0.95 6565 30553
chr6 41196062 41206620 + TREML4 ENSG00000188056.7 41196062 0.96 0.95 6566 57683
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 83963
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 35027
Expression level of Genes
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miRNAs possibly regulated by vista51900[chr6:41238379-41238420]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results