EnhancerDB
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  3. vista51904[chr6:41246560-41247024]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51904[chr6:41246560-41247024]
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Tissue distribution of vista51904
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Transcription factor that possibly regulate vista51904[chr6:41246560-41247024]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41246701 41247093 CTCF UCSC Txn Factor no Conserved 108540162
chr6 41246759 41247115 MAX UCSC Txn Factor no Conserved 108540163
chr6 41246760 41247039 RAD21 UCSC Txn Factor no Conserved 108540164
chr6 41246797 41247016 RUNX3 UCSC Txn Factor no Conserved 108540165
chr6 41246820 41247036 TEAD4 UCSC Txn Factor no Conserved 108540166
chr6 41246830 41247037 NR2F2 UCSC Txn Factor no Conserved 108540167
chr6 41246856 41246976 TAL1 UCSC Txn Factor no Conserved 108540168
chr6 41246868 41246946 BHLHE40 UCSC Txn Factor no Conserved 108540169
chr6 41246586 41246590 H1TF2 TRANSFAC yes 70362175
chr6 41246586 41246590 NFE TRANSFAC yes 70362176
chr6 41246586 41246590 SRF TRANSFAC yes 70362177
chr6 41246588 41246606 MAFF JASPAR yes 70362178
chr6 41246594 41246605 NFE2L2 JASPAR yes 70362179
chr6 41246595 41246606 FOS JASPAR yes 70362180
chr6 41246597 41246603 JUN TRANSFAC yes 70362181
chr6 41246603 41246614 CEBPB JASPAR yes 70362182
chr6 41246615 41246630 NR2C2 JASPAR yes 70362183
chr6 41246625 41246629 LFA1 TRANSFAC yes 70362184
chr6 41246646 41246657 NRL JASPAR yes 70362185
chr6 41246666 41246681 LEF1 JASPAR yes 70362186
chr6 41246675 41246680 ETS2 TRANSFAC yes 70362187
chr6 41246689 41246701 INSM1 JASPAR yes 70362188
chr6 41246696 41246700 ESR1 TRANSFAC yes 70362189
chr6 41246712 41246722 EN2 JASPAR yes 70362190
chr6 41246712 41246722 ESX1 JASPAR yes 70362191
chr6 41246712 41246722 GBX1 JASPAR yes 70362192
chr6 41246712 41246722 GBX2 JASPAR yes 70362193
chr6 41246712 41246722 GSX2 JASPAR yes 70362194
chr6 41246712 41246722 HESX1 JASPAR yes 70362195
chr6 41246712 41246722 HOXB3 JASPAR yes 70362196
chr6 41246712 41246722 LBX2 JASPAR yes 70362197
chr6 41246712 41246722 LHX2 JASPAR yes 70362198
chr6 41246712 41246722 MIXL1 JASPAR yes 70362199
chr6 41246712 41246722 MNX1 JASPAR yes 70362200
chr6 41246712 41246722 RAX JASPAR yes 70362201
chr6 41246713 41246717 H1TF2 TRANSFAC yes 70362202
chr6 41246713 41246717 NFE TRANSFAC yes 70362203
chr6 41246713 41246717 SRF TRANSFAC yes 70362204
chr6 41246713 41246721 BARX1 JASPAR yes 70362205
chr6 41246713 41246721 BSX JASPAR yes 70362206
chr6 41246713 41246721 DLX6 JASPAR yes 70362207
chr6 41246713 41246721 ISX JASPAR yes 70362208
chr6 41246713 41246721 LBX1 JASPAR yes 70362209
chr6 41246713 41246721 LHX9 JASPAR yes 70362210
chr6 41246713 41246721 MSX1 JASPAR yes 70362211
chr6 41246713 41246721 MSX2 JASPAR yes 70362212
chr6 41246713 41246721 NKX6-2 JASPAR yes 70362213
chr6 41246713 41246721 PRRX1 JASPAR yes 70362214
chr6 41246713 41246721 RAX2 JASPAR yes 70362215
chr6 41246713 41246721 SHOX JASPAR yes 70362216
chr6 41246713 41246721 UNCX JASPAR yes 70362217
chr6 41246713 41246723 HOXB13 JASPAR yes 70362218
chr6 41246713 41246727 POU1F1 JASPAR yes 70362219
chr6 41246714 41246726 POU3F1 JASPAR yes 70362220
chr6 41246714 41246726 POU3F2 JASPAR yes 70362221
chr6 41246714 41246727 POU3F3 JASPAR yes 70362222
chr6 41246715 41246727 POU2F1 JASPAR yes 70362223
chr6 41246716 41246725 POU3F4 JASPAR yes 70362224
chr6 41246716 41246725 POU5F1B JASPAR yes 70362225
chr6 41246718 41246721 MYB TRANSFAC yes 70362226
chr6 41246730 41246744 IRF7 JASPAR yes 70362227
chr6 41246733 41246754 IRF1 JASPAR yes 70362228
chr6 41246746 41246751 ETS2 TRANSFAC yes 70362229
chr6 41246748 41246758 REL JASPAR yes 70362230
chr6 41246748 41246759 NFKB1 JASPAR yes 70362231
chr6 41246749 41246759 REL JASPAR yes 70362232
chr6 41246753 41246773 RREB1 JASPAR yes 70362233
chr6 41246753 41246774 ZNF263 JASPAR yes 70362234
chr6 41246762 41246768 MZF1 JASPAR yes 70362235
chr6 41246781 41246795 TCF7L2 JASPAR yes 70362236
chr6 41246781 41246796 HNF4G JASPAR yes 70362237
chr6 41246781 41246796 LEF1 JASPAR yes 70362238
chr6 41246796 41246817 ZNF263 JASPAR yes 70362239
chr6 41246807 41246817 SP1 JASPAR yes 70362240
chr6 41246810 41246820 MZF1 JASPAR yes 70362241
chr6 41246810 41246822 INSM1 JASPAR yes 70362242
chr6 41246813 41246823 SP1 JASPAR yes 70362243
chr6 41246835 41246849 STAT1 JASPAR yes 70362244
chr6 41246835 41246850 PRDM1 JASPAR yes 70362245
chr6 41246854 41246859 NFY TRANSFAC yes 70362246
chr6 41246856 41246870 TLX1 JASPAR yes 70362247
chr6 41246857 41246871 TLX1 JASPAR yes 70362248
chr6 41246889 41246908 CTCF JASPAR yes 70362249
chr6 41246895 41246913 E2F3 JASPAR yes 70362250
chr6 41246898 41246910 E2F1 JASPAR yes 70362251
chr6 41246905 41246909 H1TF2 TRANSFAC yes 70362252
chr6 41246905 41246909 NFE TRANSFAC yes 70362253
chr6 41246905 41246909 SRF TRANSFAC yes 70362254
chr6 41246926 41246941 RUNX2 JASPAR yes 70362255
chr6 41246930 41246950 RREB1 JASPAR yes 70362256
chr6 41246952 41246960 GATA3 JASPAR yes 70362257
chr6 41246952 41246960 GATA5 JASPAR yes 70362258
chr6 41246962 41246965 MYB TRANSFAC yes 70362259
chr6 41246968 41246974 PEA3 TRANSFAC yes 70362260
chr6 41246976 41246986 MLXIPL JASPAR yes 70362261
chr6 41246976 41246986 MLX JASPAR yes 70362262
chr6 41246978 41246983 MYC TRANSFAC yes 70362263
chr6 41246978 41246983 USF1 TRANSFAC yes 70362264
chr6 41246978 41246983 USF2 TRANSFAC yes 70362265
chr6 41246978 41246985 USF1 JASPAR yes 70362266
chr6 41246986 41246993 NKX3-1 JASPAR yes 70362267
chr6 41246994 41247010 ZNF143 JASPAR yes 70362268
chr6 41247005 41247011 LEF1 TRANSFAC yes 70362269
chr6 41247005 41247011 SOX10 JASPAR yes 70362270
chr6 41247010 41247013 MYB TRANSFAC yes 70362271
SNP sites on vista51904[chr6:41246560-41247024]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41246597 rs568102657 C T
FOS JUN MAFF NFE2L2
9024108
chr6 41246633 rs6910730 A G no 9024109
chr6 41246813 rs76662338 C T
CTCF INSM1 MAX MZF1 RAD21 RUNX3 SP1 ZNF263
9024110
chr6 41246835 rs566321482 T C
CTCF MAX NR2F2 PRDM1 RAD21 RUNX3 STAT1 TEAD4
9024111
chr6 41246841 rs200403616 G A
CTCF MAX NR2F2 PRDM1 RAD21 RUNX3 STAT1 TEAD4
9024112
chr6 41246887 rs144520387 C G
BHLHE40 CTCF MAX NR2F2 RAD21 RUNX3 TAL1 TEAD4
9024113
chr6 41246893 rs146147776 C T
BHLHE40 CTCF MAX NR2F2 RAD21 RUNX3 TAL1 TEAD4
9024114
chr6 41246923 rs577335056 T G
BHLHE40 CTCF MAX NR2F2 RAD21 RUNX3 TAL1 TEAD4
9024115
Genes possibly regulated by vista51904[chr6:41246560-41247024]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41158015 41168932 - TREML2 ENSG00000112195.8 41168932 0.89 0.95 6565 22372
chr6 41196062 41206620 + TREML4 ENSG00000188056.7 41196062 0.96 0.95 6566 49502
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 92567
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 43631
Expression level of Genes
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miRNAs possibly regulated by vista51904[chr6:41246560-41247024]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results