EnhancerDB
  1. Home
  2. Enhancers
  3. vista51906[chr6:41286601-41286824]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51906[chr6:41286601-41286824]
Back to top
Tissue distribution of vista51906
Back to top
Transcription factor that possibly regulate vista51906[chr6:41286601-41286824]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41286449 41286801 BHLHE40 UCSC Txn Factor no Conserved 108540170
chr6 41286544 41287000 CTCF UCSC Txn Factor no Conserved 108540171
chr6 41286564 41286916 ZNF143 UCSC Txn Factor no Conserved 108540172
chr6 41286609 41286874 RAD21 UCSC Txn Factor no Conserved 108540173
chr6 41286615 41286891 SMC3 UCSC Txn Factor no Conserved 108540174
chr6 41286604 41286616 HES5 JASPAR yes 70362302
chr6 41286604 41286616 HES7 JASPAR yes 70362303
chr6 41286604 41286616 HES5 JASPAR yes 101640061
chr6 41286604 41286616 HES7 JASPAR yes 101640062
chr6 41286605 41286615 BHLHE40 JASPAR yes 70362304
chr6 41286605 41286615 BHLHE41 JASPAR yes 70362305
chr6 41286605 41286615 HEY1 JASPAR yes 70362306
chr6 41286605 41286615 HEY2 JASPAR yes 70362307
chr6 41286605 41286615 MNT JASPAR yes 70362308
chr6 41286605 41286615 BHLHE40 JASPAR yes 101640063
chr6 41286605 41286615 BHLHE41 JASPAR yes 101640064
chr6 41286605 41286615 HEY1 JASPAR yes 101640065
chr6 41286605 41286615 HEY2 JASPAR yes 101640066
chr6 41286605 41286615 MNT JASPAR yes 101640067
chr6 41286607 41286612 MYC TRANSFAC yes 70362309
chr6 41286607 41286612 USF1 TRANSFAC yes 70362310
chr6 41286607 41286612 USF2 TRANSFAC yes 70362311
chr6 41286607 41286612 MYC TRANSFAC yes 101640068
chr6 41286607 41286612 USF1 TRANSFAC yes 101640069
chr6 41286607 41286612 USF2 TRANSFAC yes 101640070
chr6 41286616 41286620 NFE TRANSFAC yes 70362312
chr6 41286616 41286620 NFE TRANSFAC yes 101640071
chr6 41286625 41286638 ELF1 JASPAR yes 70362313
chr6 41286625 41286638 ELF1 JASPAR yes 101640072
chr6 41286627 41286638 ETV2 JASPAR yes 70362314
chr6 41286627 41286638 ETV2 JASPAR yes 101640073
chr6 41286628 41286638 ERF JASPAR yes 70362315
chr6 41286628 41286638 ETS1 JASPAR yes 70362316
chr6 41286628 41286638 ERF JASPAR yes 101640074
chr6 41286628 41286638 ETS1 JASPAR yes 101640075
chr6 41286628 41286639 ELK4 JASPAR yes 70362317
chr6 41286628 41286639 FLI1 JASPAR yes 70362318
chr6 41286628 41286639 ELK4 JASPAR yes 101640076
chr6 41286628 41286639 FLI1 JASPAR yes 101640077
chr6 41286650 41286664 CREB3L1 JASPAR yes 70362319
chr6 41286650 41286664 CREB3L1 JASPAR yes 101640078
chr6 41286658 41286677 REST JASPAR yes 70362320
chr6 41286658 41286677 REST JASPAR yes 101640079
chr6 41286688 41286699 ESRRA JASPAR yes 70362321
chr6 41286688 41286699 ESRRA JASPAR yes 101640080
chr6 41286716 41286723 GATA1 TRANSFAC yes 70362322
chr6 41286716 41286723 GATA1 TRANSFAC yes 101640081
chr6 41286731 41286751 ESR1 JASPAR yes 70362323
chr6 41286731 41286751 ESR1 JASPAR yes 101640082
chr6 41286735 41286753 ESR2 JASPAR yes 70362324
chr6 41286735 41286753 ESR2 JASPAR yes 101640083
chr6 41286736 41286751 ESR2 JASPAR yes 70362325
chr6 41286736 41286751 ESR2 JASPAR yes 101640084
chr6 41286736 41286756 ESR1 JASPAR yes 70362326
chr6 41286736 41286756 ESR1 JASPAR yes 101640085
chr6 41286744 41286750 NFE2 TRANSFAC yes 70362327
chr6 41286744 41286750 NFE2 TRANSFAC yes 101640086
chr6 41286747 41286757 SP1 JASPAR yes 70362328
chr6 41286747 41286757 SP1 JASPAR yes 101640087
chr6 41286748 41286758 SP1 JASPAR yes 70362329
chr6 41286748 41286758 SP1 JASPAR yes 101640088
chr6 41286748 41286767 CTCF JASPAR yes 70362330
chr6 41286748 41286767 CTCF JASPAR yes 101640089
chr6 41286750 41286756 NFE2 TRANSFAC yes 70362331
chr6 41286750 41286756 NFE2 TRANSFAC yes 101640090
chr6 41286751 41286765 ZIC1 JASPAR yes 70362332
chr6 41286751 41286765 ZIC1 JASPAR yes 101640091
chr6 41286751 41286766 ZIC3 JASPAR yes 70362333
chr6 41286751 41286766 ZIC4 JASPAR yes 70362334
chr6 41286751 41286766 ZIC3 JASPAR yes 101640092
chr6 41286751 41286766 ZIC4 JASPAR yes 101640093
chr6 41286761 41286776 TFAP2A JASPAR yes 70362335
chr6 41286761 41286776 TFAP2C JASPAR yes 70362336
chr6 41286761 41286776 TFAP2A JASPAR yes 101640094
chr6 41286761 41286776 TFAP2C JASPAR yes 101640095
chr6 41286789 41286800 NRF1 JASPAR yes 70362337
chr6 41286789 41286800 NRF1 JASPAR yes 101640096
chr6 41286794 41286805 NRF1 JASPAR yes 70362338
chr6 41286794 41286805 NRF1 JASPAR yes 101640097
chr6 41286812 41286827 ZIC4 JASPAR yes 70362339
chr6 41286812 41286827 ZIC4 JASPAR yes 101640098
chr6 41286814 41286823 SNAI2 JASPAR yes 70362340
chr6 41286814 41286823 SNAI2 JASPAR yes 101640099
chr6 41286815 41286820 USF2 TRANSFAC yes 70362341
chr6 41286815 41286820 USF2 TRANSFAC yes 101640100
SNP sites on vista51906[chr6:41286601-41286824]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41286604 rs1542638 A G
BHLHE40 CTCF HES5 HES7 ZNF143
9024313
chr6 41286608 rs541462245 CACG C
BHLHE40 BHLHE41 CTCF HES5 HES7 HEY1 HEY2 MNT MYC USF1 USF2 ZNF143
9024314
chr6 41286625 rs67306542 G C
BHLHE40 CTCF ELF1 RAD21 SMC3 ZNF143
9024315
chr6 41286659 rs543193459 TGGCTCTTCAGAG T
BHLHE40 CREB3L1 CTCF RAD21 REST SMC3 ZNF143
9024316
chr6 41286677 rs144381442 T C
BHLHE40 CTCF RAD21 REST SMC3 ZNF143
9024317
chr6 41286753 rs184118276 G C,T
BHLHE40 CTCF ESR1 ESR2 NFE2 RAD21 SMC3 SP1 ZIC1 ZIC3 ZIC4 ZNF143
9024318
chr6 41286796 rs560699824 C T
BHLHE40 CTCF NRF1 RAD21 SMC3 ZNF143
9024319
chr6 41286804 rs35820544 C T
CTCF NRF1 RAD21 SMC3 ZNF143
9024320
Genes possibly regulated by vista51906[chr6:41286601-41286824]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41196062 41206620 + TREML4 ENSG00000188056.7 41196062 0.96 0.95 6566 9461
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 67856
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 83431
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51906[chr6:41286601-41286824]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results