EnhancerDB
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  3. vista51907[chr6:41301419-41301724]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51907[chr6:41301419-41301724]
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Tissue distribution of vista51907
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Transcription factor that possibly regulate vista51907[chr6:41301419-41301724]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41301305 41302159 EBF1 UCSC Txn Factor no Conserved 108540175
chr6 41301305 41302159 EBF1 UCSC Txn Factor no Conserved 108540176
chr6 41301443 41301447 H4TF2 TRANSFAC yes 70362342
chr6 41301443 41301457 EBF1 JASPAR yes 70362343
chr6 41301444 41301455 EBF1 JASPAR yes 70362344
chr6 41301445 41301451 MZF1 JASPAR yes 70362345
chr6 41301458 41301478 TP63 JASPAR yes 70362346
chr6 41301491 41301511 ESR1 JASPAR yes 70362347
chr6 41301501 41301511 SP1 JASPAR yes 70362348
chr6 41301502 41301512 SP1 JASPAR yes 70362349
chr6 41301504 41301510 NFE2 TRANSFAC yes 70362350
chr6 41301513 41301517 H4TF2 TRANSFAC yes 70362351
chr6 41301526 41301533 SPIB JASPAR yes 70362352
chr6 41301526 41301537 FLI1 JASPAR yes 70362353
chr6 41301544 41301559 HSF1 JASPAR yes 70362354
chr6 41301545 41301558 HSF1 JASPAR yes 70362355
chr6 41301545 41301558 HSF2 JASPAR yes 70362356
chr6 41301545 41301558 HSF4 JASPAR yes 70362357
chr6 41301557 41301570 NFKB1 JASPAR yes 70362358
chr6 41301557 41301570 NFKB2 JASPAR yes 70362359
chr6 41301558 41301563 SP1 TRANSFAC yes 70362360
chr6 41301558 41301569 NFKB1 JASPAR yes 70362361
chr6 41301563 41301573 MZF1 JASPAR yes 70362362
chr6 41301591 41301607 GLIS1 JASPAR yes 70362363
chr6 41301592 41301606 GLIS3 JASPAR yes 70362364
chr6 41301603 41301612 HIC2 JASPAR yes 70362365
chr6 41301605 41301625 RREB1 JASPAR yes 70362366
chr6 41301619 41301628 SNAI2 JASPAR yes 70362367
chr6 41301619 41301629 FIGLA JASPAR yes 70362368
chr6 41301619 41301629 TCF3 JASPAR yes 70362369
chr6 41301619 41301629 TCF4 JASPAR yes 70362370
chr6 41301621 41301630 ZEB1 JASPAR yes 70362371
chr6 41301623 41301628 SP1 TRANSFAC yes 70362372
chr6 41301625 41301630 TFAP2A TRANSFAC yes 70362373
chr6 41301625 41301631 MZF1 JASPAR yes 70362374
chr6 41301627 41301632 ETS2 TRANSFAC yes 70362375
chr6 41301629 41301644 RUNX2 JASPAR yes 70362376
chr6 41301650 41301654 LFA1 TRANSFAC yes 70362377
chr6 41301676 41301680 NFE TRANSFAC yes 70362378
chr6 41301677 41301691 EBF1 JASPAR yes 70362379
chr6 41301678 41301689 EBF1 JASPAR yes 70362380
chr6 41301678 41301692 EBF1 JASPAR yes 70362381
chr6 41301680 41301691 EBF1 JASPAR yes 70362382
chr6 41301684 41301689 TFAP2A TRANSFAC yes 70362383
chr6 41301684 41301690 MZF1 JASPAR yes 70362384
chr6 41301703 41301714 NFE2L2 JASPAR yes 70362385
SNP sites on vista51907[chr6:41301419-41301724]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41301444 rs112456835 G A
EBF1 H4TF2
9024400
chr6 41301467 rs549164726 C T
EBF1 TP63
9024401
chr6 41301586 rs73435356 C T
EBF1
9024402
chr6 41301655 rs73435357 A G
EBF1
9024403
chr6 41301664 rs78908756 G A,T
EBF1
9024404
chr6 41301681 rs74572569 C A
EBF1
9024405
chr6 41301713 rs566979348 C T
EBF1 NFE2L2
9024406
Genes possibly regulated by vista51907[chr6:41301419-41301724]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 53038
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 98331
Expression level of Genes
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miRNAs possibly regulated by vista51907[chr6:41301419-41301724]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results