EnhancerDB
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  3. vista51908[chr6:41301757-41302315]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51908[chr6:41301757-41302315]
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Tissue distribution of vista51908
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Transcription factor that possibly regulate vista51908[chr6:41301757-41302315]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41301305 41302159 EBF1 UCSC Txn Factor no Conserved 108540175
chr6 41301305 41302159 EBF1 UCSC Txn Factor no Conserved 108540176
chr6 41301815 41302236 RELA UCSC Txn Factor no Conserved 108540177
chr6 41301760 41301774 TLX1 JASPAR yes 70362386
chr6 41301801 41301809 MEIS2 JASPAR yes 70362387
chr6 41301801 41301809 MEIS3 JASPAR yes 70362388
chr6 41301802 41301806 NFE TRANSFAC yes 70362389
chr6 41301812 41301831 CTCF JASPAR yes 70362390
chr6 41301813 41301828 ZIC4 JASPAR yes 70362391
chr6 41301814 41301828 ZIC1 JASPAR yes 70362392
chr6 41301819 41301832 NR2F1 JASPAR yes 70362393
chr6 41301822 41301839 RARA JASPAR yes 70362394
chr6 41301822 41301839 RXRA JASPAR yes 70362395
chr6 41301823 41301827 ESR1 TRANSFAC yes 70362396
chr6 41301829 41301844 PRDM1 JASPAR yes 70362397
chr6 41301829 41301844 STAT2 JASPAR yes 70362398
chr6 41301835 41301845 RELA JASPAR yes 70362399
chr6 41301839 41301855 RFX2 JASPAR yes 70362400
chr6 41301839 41301855 RFX3 JASPAR yes 70362401
chr6 41301839 41301855 RFX4 JASPAR yes 70362402
chr6 41301839 41301855 RFX5 JASPAR yes 70362403
chr6 41301842 41301857 RFX5 JASPAR yes 70362404
chr6 41301855 41301860 MYC TRANSFAC yes 70362405
chr6 41301855 41301866 NRL JASPAR yes 70362406
chr6 41301865 41301885 RREB1 JASPAR yes 70362407
chr6 41301867 41301887 RREB1 JASPAR yes 70362408
chr6 41301869 41301889 RREB1 JASPAR yes 70362409
chr6 41301871 41301891 RREB1 JASPAR yes 70362410
chr6 41301873 41301893 RREB1 JASPAR yes 70362411
chr6 41301875 41301895 RREB1 JASPAR yes 70362412
chr6 41301877 41301897 RREB1 JASPAR yes 70362413
chr6 41301879 41301899 RREB1 JASPAR yes 70362414
chr6 41301881 41301901 RREB1 JASPAR yes 70362415
chr6 41301883 41301903 RREB1 JASPAR yes 70362416
chr6 41301885 41301905 RREB1 JASPAR yes 70362417
chr6 41301901 41301913 CREB1 JASPAR yes 70362418
chr6 41301903 41301917 CREB3 JASPAR yes 70362419
chr6 41301906 41301911 ATF1 TRANSFAC yes 70362420
chr6 41301911 41301925 TLX1 JASPAR yes 70362421
chr6 41301920 41301926 YY1 JASPAR yes 70362422
chr6 41301928 41301948 ESR1 JASPAR yes 70362423
chr6 41301940 41301948 EHF JASPAR yes 70362424
chr6 41301945 41301955 MZF1 JASPAR yes 70362425
chr6 41301965 41301975 SP1 TRANSFAC yes 70362426
chr6 41301976 41301986 TEAD1 JASPAR yes 70362427
chr6 41301980 41301991 FOXB1 JASPAR yes 70362428
chr6 41301982 41301992 MEOX2 JASPAR yes 70362429
chr6 41302014 41302018 NFE TRANSFAC yes 70362430
chr6 41302023 41302034 NFKB1 JASPAR yes 70362431
chr6 41302024 41302034 NFKB1 JASPAR yes 70362432
chr6 41302024 41302034 RELA JASPAR yes 70362433
chr6 41302024 41302034 REL JASPAR yes 70362434
chr6 41302027 41302039 INSM1 JASPAR yes 70362435
chr6 41302090 41302101 ETV2 JASPAR yes 70362436
chr6 41302095 41302103 MEIS2 JASPAR yes 70362437
chr6 41302095 41302103 MEIS3 JASPAR yes 70362438
chr6 41302096 41302100 NFE TRANSFAC yes 70362439
chr6 41302115 41302119 YY1 TRANSFAC yes 70362440
chr6 41302129 41302139 ELK1 JASPAR yes 70362441
chr6 41302131 41302141 GABPA JASPAR yes 70362442
chr6 41302133 41302139 ETS1 JASPAR yes 70362443
chr6 41302133 41302139 SPI1 JASPAR yes 70362444
chr6 41302134 41302149 HSF1 JASPAR yes 70362445
chr6 41302135 41302148 HSF4 JASPAR yes 70362446
chr6 41302169 41302173 H4TF2 TRANSFAC yes 70362447
chr6 41302186 41302195 SNAI2 JASPAR yes 70362448
chr6 41302196 41302212 SRF JASPAR yes 70362449
chr6 41302196 41302214 SRF JASPAR yes 70362450
chr6 41302199 41302211 SRF JASPAR yes 70362451
chr6 41302215 41302235 TBX19 JASPAR yes 70362452
chr6 41302217 41302233 T JASPAR yes 70362453
chr6 41302219 41302231 PKNOX1 JASPAR yes 70362454
chr6 41302219 41302231 PKNOX2 JASPAR yes 70362455
chr6 41302219 41302231 TGIF1 JASPAR yes 70362456
chr6 41302219 41302232 ZBTB18 JASPAR yes 70362457
chr6 41302229 41302243 SPI1 JASPAR yes 70362458
chr6 41302245 41302256 E2F6 JASPAR yes 70362459
chr6 41302257 41302268 NRL JASPAR yes 70362460
chr6 41302295 41302301 LEF1 TRANSFAC yes 70362461
chr6 41302295 41302301 SOX10 JASPAR yes 70362462
chr6 41302295 41302310 FOXA1 JASPAR yes 70362463
chr6 41302296 41302307 FOXB1 JASPAR yes 70362464
chr6 41302296 41302307 FOXC1 JASPAR yes 70362465
chr6 41302296 41302308 FOXC2 JASPAR yes 70362466
chr6 41302296 41302312 POU4F3 JASPAR yes 70362467
SNP sites on vista51908[chr6:41301757-41302315]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41301780 rs73435358 C T
EBF1
9024409
chr6 41301824 rs557799210 GGTCAGAGAAGGGGAAA G
CTCF EBF1 ESR1 NR2F1 RARA RELA RXRA ZIC1 ZIC4
9024410
chr6 41301907 rs72863530 T A,C
ATF1 CREB1 CREB3 EBF1 RELA
9024411
chr6 41302019 rs78346905 C T
EBF1 RELA
9024412
chr6 41302050 rs640067 G A
EBF1 RELA
9024413
chr6 41302150 rs185127779 G A
EBF1 RELA
9024414
chr6 41302169 rs546998174 T C
H4TF2 RELA
9024415
chr6 41302202 rs141310448 A G
RELA SRF
9024416
chr6 41302294 rs16894604 T C no 9024417
Genes possibly regulated by vista51908[chr6:41301757-41302315]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 52700
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 98922
Expression level of Genes
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miRNAs possibly regulated by vista51908[chr6:41301757-41302315]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results