EnhancerDB
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  3. vista51909[chr6:41312816-41312959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51909[chr6:41312816-41312959]
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Tissue distribution of vista51909
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Transcription factor that possibly regulate vista51909[chr6:41312816-41312959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41312837 41312844 JUN TRANSFAC yes 70362468
chr6 41312837 41312844 JUN TRANSFAC yes 101641007
chr6 41312850 41312863 ZBTB18 JASPAR yes 70362469
chr6 41312850 41312863 ZBTB18 JASPAR yes 101641008
chr6 41312852 41312862 MSC JASPAR yes 70362470
chr6 41312852 41312862 NHLH1 JASPAR yes 70362471
chr6 41312852 41312862 MSC JASPAR yes 101641009
chr6 41312852 41312862 NHLH1 JASPAR yes 101641010
chr6 41312853 41312866 SCRT2 JASPAR yes 70362472
chr6 41312853 41312866 SCRT2 JASPAR yes 101641011
chr6 41312867 41312874 SPIB JASPAR yes 70362473
chr6 41312867 41312874 SPIB JASPAR yes 101641012
chr6 41312879 41312886 PEA3 TRANSFAC yes 70362474
chr6 41312879 41312886 PEA3 TRANSFAC yes 101641013
chr6 41312884 41312893 THAP1 JASPAR yes 70362475
chr6 41312884 41312893 THAP1 JASPAR yes 101641014
chr6 41312887 41312891 LFA1 TRANSFAC yes 70362476
chr6 41312887 41312891 LFA1 TRANSFAC yes 101641015
chr6 41312894 41312897 MYB TRANSFAC yes 70362477
chr6 41312894 41312897 MYB TRANSFAC yes 101641016
chr6 41312913 41312919 ETS1 JASPAR yes 70362478
chr6 41312913 41312919 SPI1 JASPAR yes 70362479
chr6 41312913 41312919 ETS1 JASPAR yes 101641017
chr6 41312913 41312919 SPI1 JASPAR yes 101641018
chr6 41312938 41312952 PAX6 JASPAR yes 70362480
chr6 41312938 41312952 PAX6 JASPAR yes 101641019
chr6 41312943 41312957 NR2F1 JASPAR yes 70362481
chr6 41312943 41312957 NR2F1 JASPAR yes 101641020
chr6 41312955 41312967 GRHL1 JASPAR yes 70362482
chr6 41312955 41312967 GRHL1 JASPAR yes 101641021
chr6 41312958 41312964 PTF TRANSFAC yes 70362483
chr6 41312958 41312964 PTF TRANSFAC yes 101641022
SNP sites on vista51909[chr6:41312816-41312959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41312856 rs113574916 A T
MSC NHLH1 SCRT2 ZBTB18
9024464
Genes possibly regulated by vista51909[chr6:41312816-41312959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41235664 41254457 - TREM1 ENSG00000124731.8 41254457 0.97 1.0 6567 41641
chr6 41303393 41318625 + NCR2 ENSG00000096264.9 41303393 0.95 1.0 6568 90577
Expression level of Genes
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miRNAs possibly regulated by vista51909[chr6:41312816-41312959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results