EnhancerDB
  1. Home
  2. Enhancers
  3. vista51928[chr6:41672440-41672821]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista51928[chr6:41672440-41672821]
Back to top
Tissue distribution of vista51928
Back to top
Transcription factor that possibly regulate vista51928[chr6:41672440-41672821]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41672452 41672465 POU2F2 JASPAR yes 70363145
chr6 41672452 41672465 POU2F2 JASPAR yes 101666943
chr6 41672466 41672471 SP1 TRANSFAC yes 70363146
chr6 41672466 41672471 SP1 TRANSFAC yes 101666944
chr6 41672469 41672480 E2F6 JASPAR yes 70363147
chr6 41672469 41672480 E2F6 JASPAR yes 101666945
chr6 41672470 41672475 SP1 TRANSFAC yes 70363148
chr6 41672470 41672475 SP1 TRANSFAC yes 101666946
chr6 41672479 41672494 ZIC3 JASPAR yes 70363149
chr6 41672479 41672494 ZIC3 JASPAR yes 101666947
chr6 41672487 41672492 ETS2 TRANSFAC yes 70363150
chr6 41672487 41672492 ETS2 TRANSFAC yes 101666948
chr6 41672493 41672512 CTCF JASPAR yes 70363151
chr6 41672493 41672512 CTCF JASPAR yes 101666949
chr6 41672516 41672531 MEF2A JASPAR yes 70363152
chr6 41672516 41672531 MEF2A JASPAR yes 101666950
chr6 41672519 41672529 MEF2A JASPAR yes 70363153
chr6 41672519 41672529 MEF2A JASPAR yes 101666951
chr6 41672520 41672524 YY1 TRANSFAC yes 70363154
chr6 41672520 41672524 YY1 TRANSFAC yes 101666952
chr6 41672527 41672542 AR JASPAR yes 70363155
chr6 41672527 41672542 AR JASPAR yes 101666953
chr6 41672541 41672555 PLAG1 JASPAR yes 70363156
chr6 41672541 41672555 PLAG1 JASPAR yes 101666954
chr6 41672549 41672562 TFAP2B JASPAR yes 70363157
chr6 41672549 41672562 TFAP2C JASPAR yes 70363158
chr6 41672549 41672562 TFAP2B JASPAR yes 101666955
chr6 41672549 41672562 TFAP2C JASPAR yes 101666956
chr6 41672615 41672630 ZIC4 JASPAR yes 70363159
chr6 41672615 41672630 ZIC4 JASPAR yes 101666957
chr6 41672619 41672628 SNAI2 JASPAR yes 70363160
chr6 41672619 41672628 SNAI2 JASPAR yes 101666958
chr6 41672619 41672629 TCF3 JASPAR yes 70363161
chr6 41672619 41672629 TCF4 JASPAR yes 70363162
chr6 41672619 41672629 TCF3 JASPAR yes 101666959
chr6 41672619 41672629 TCF4 JASPAR yes 101666960
chr6 41672621 41672630 ZEB1 JASPAR yes 70363163
chr6 41672621 41672630 ZEB1 JASPAR yes 101666961
chr6 41672623 41672628 SP1 TRANSFAC yes 70363164
chr6 41672623 41672628 SP1 TRANSFAC yes 101666962
chr6 41672666 41672676 MZF1 JASPAR yes 70363165
chr6 41672666 41672676 MZF1 JASPAR yes 101666963
chr6 41672671 41672679 FOXO3 JASPAR yes 70363166
chr6 41672671 41672679 FOXO3 JASPAR yes 101666964
chr6 41672672 41672681 SRY JASPAR yes 70363167
chr6 41672672 41672681 SRY JASPAR yes 101666965
chr6 41672687 41672697 MZF1 JASPAR yes 70363168
chr6 41672687 41672697 MZF1 JASPAR yes 101666966
chr6 41672690 41672695 TFAP2A TRANSFAC yes 70363169
chr6 41672690 41672695 TFAP2A TRANSFAC yes 101666967
chr6 41672690 41672696 MZF1 JASPAR yes 70363170
chr6 41672690 41672696 MZF1 JASPAR yes 101666968
chr6 41672698 41672712 TCF7L2 JASPAR yes 70363171
chr6 41672698 41672712 TCF7L2 JASPAR yes 101666969
chr6 41672702 41672708 TCF1 TRANSFAC yes 70363172
chr6 41672702 41672708 TCF1 TRANSFAC yes 101666970
chr6 41672702 41672709 TCF4 TRANSFAC yes 70363173
chr6 41672702 41672709 TCF4 TRANSFAC yes 101666971
chr6 41672725 41672732 NFATC2 JASPAR yes 70363174
chr6 41672725 41672732 NFATC2 JASPAR yes 101666972
chr6 41672797 41672801 NFE TRANSFAC yes 70363175
chr6 41672797 41672801 NFE TRANSFAC yes 101666973
SNP sites on vista51928[chr6:41672440-41672821]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 41672469 rs112999365 C T
E2F6 SP1
9027211
chr6 41672483 rs547024003 C G
ZIC3
9027212
chr6 41672488 rs527678145 GGGAAGCACAGGCCCCTGGT G
ETS2 ZIC3
9027213
chr6 41672639 rs6458236 A G
POLR2A
9027214
chr6 41672682 rs114476744 C T
POLR2A
9027215
chr6 41672752 rs577366283 T C
POLR2A
9027216
chr6 41672769 rs6933790 T C
POLR2A
9027217
Genes possibly regulated by vista51928[chr6:41672440-41672821]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 41604620 41621984 + MDFI ENSG00000112559.9 41604620 0.86 1.0 6570 32180
chr6 41651716 41703997 - TFEB ENSG00000112561.13 41703997 0.8 0.99 6571 68824
chr6 41653964 41654127 + AL035588.1 ENSG00000268275.1 41653964 0.0 1.0 6572 81524
chr6 41704449 41721847 - PGC ENSG00000096088.12 41721847 1.0 1.0 6573 50974
chr6 41737914 41754280 - FRS3 ENSG00000137218.6 41754280 0.71 1.0 6574 18541
chr6 41748087 41757879 + PRICKLE4 ENSG00000124593.10 41748087 0.76 1.0 6575 24734
chr6 41755400 41757636 + TOMM6 ENSG00000214736.3 41755400 0.89 0.88 6576 17421
Expression level of Genes
Back to top
miRNAs possibly regulated by vista51928[chr6:41672440-41672821]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results